RNA–Protein interactions for RNA: ENST00000489241.1

XRN1-213, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 3

Gene XRN1, Length 393 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-213ENST00000489241 EMC3Q9P0I2 261 aa2.21□□□□□ -2.06
XRN1-213ENST00000489241 EVC2Q86UK5 1308 aa2.2□□□□□ -2.06
XRN1-213ENST00000489241 SMIM23A6NLE4 172 aa2.2□□□□□ -2.06
XRN1-213ENST00000489241 M0R036 132 aa2.2□□□□□ -2.06
XRN1-213ENST00000489241 SYNGR2O43760 224 aa2.2□□□□□ -2.06
XRN1-213ENST00000489241 CRYGDP07320 174 aa2.2□□□□□ -2.06
XRN1-213ENST00000489241 CD7P09564 240 aa2.2□□□□□ -2.06
XRN1-213ENST00000489241 IGHV3-30-3P0DP02 117 aa2.2□□□□□ -2.06
XRN1-213ENST00000489241 MYL12AP19105 171 aa2.2□□□□□ -2.06
XRN1-213ENST00000489241 DDTP30046 118 aa2.2□□□□□ -2.06
XRN1-213ENST00000489241 CA7P43166 264 aa2.2□□□□□ -2.06
XRN1-213ENST00000489241 AKR1C2P52895 323 aa2.2□□□□□ -2.06
XRN1-213ENST00000489241 TCL1AP56279 114 aa2.2□□□□□ -2.06
XRN1-213ENST00000489241 CTBP2P56545 445 aa2.2□□□□□ -2.06
XRN1-213ENST00000489241 SNAP25P60880 206 aa2.2□□□□□ -2.06
XRN1-213ENST00000489241 ACSM3Q53FZ2 586 aa2.2□□□□□ -2.06
XRN1-213ENST00000489241 OR10K2Q6IF99 312 aa2.2□□□□□ -2.06
XRN1-213ENST00000489241 NOXRED1Q6NXP6 359 aa2.2□□□□□ -2.06
XRN1-213ENST00000489241 SDIM1Q6ZPB5 146 aa2.2□□□□□ -2.06
XRN1-213ENST00000489241 SLC51BQ86UW2 128 aa2.2□□□□□ -2.06
XRN1-213ENST00000489241 GID4Q8IVV7 300 aa2.2□□□□□ -2.06
XRN1-213ENST00000489241 OR8K1Q8NGG5 319 aa2.2□□□□□ -2.06
XRN1-213ENST00000489241 MFSD8Q8NHS3 518 aa2.2□□□□□ -2.06
XRN1-213ENST00000489241 MUC7Q8TAX7 377 aa2.2□□□□□ -2.06
XRN1-213ENST00000489241 LMX1AQ8TE12 382 aa2.2□□□□□ -2.06
XRN1-213ENST00000489241 OPTNQ96CV9 577 aa2.2□□□□□ -2.06
XRN1-213ENST00000489241 ANKRD36BP1Q96IX9 119 aa2.2□□□□□ -2.06
XRN1-213ENST00000489241 TM2D3Q9BRN9 247 aa2.2□□□□□ -2.06
XRN1-213ENST00000489241 UPK3BQ9BT76 320 aa2.2□□□□□ -2.06
XRN1-213ENST00000489241 TMEM109Q9BVC6 243 aa2.2□□□□□ -2.06
XRN1-213ENST00000489241 TAS2R9Q9NYW1 312 aa2.2□□□□□ -2.06
XRN1-213ENST00000489241 VPREB3Q9UKI3 123 aa2.2□□□□□ -2.06
XRN1-213ENST00000489241 KIF15Q9NS87 1388 aa2.2□□□□□ -2.06
XRN1-213ENST00000489241 TMED7-TICAM2A0A0A6YYA0 188 aa2.19□□□□□ -2.06
XRN1-213ENST00000489241 IGKV2-24A0A0C4DH68 120 aa2.19□□□□□ -2.06
XRN1-213ENST00000489241 DCTN3O75935 186 aa2.19□□□□□ -2.06
XRN1-213ENST00000489241 LYPLA2O95372 231 aa2.19□□□□□ -2.06
XRN1-213ENST00000489241 COL8A2P25067 703 aa2.19□□□□□ -2.06
XRN1-213ENST00000489241 TMEM33P57088 247 aa2.19□□□□□ -2.06
XRN1-213ENST00000489241 NAA20P61599 178 aa2.19□□□□□ -2.06
XRN1-213ENST00000489241 UBL4BQ8N7F7 174 aa2.19□□□□□ -2.06
XRN1-213ENST00000489241 OR1M1Q8NGA1 313 aa2.19□□□□□ -2.06
XRN1-213ENST00000489241 OR10P1Q8NGE3 313 aa2.19□□□□□ -2.06
XRN1-213ENST00000489241 JOSD2Q8TAC2 188 aa2.19□□□□□ -2.06
XRN1-213ENST00000489241 ASB17Q8WXJ9 295 aa2.19□□□□□ -2.06
XRN1-213ENST00000489241 ITFG2Q969R8 447 aa2.19□□□□□ -2.06
XRN1-213ENST00000489241 TVP23CQ96ET8 276 aa2.19□□□□□ -2.06
XRN1-213ENST00000489241 OR8B2Q96RD0 313 aa2.19□□□□□ -2.06
XRN1-213ENST00000489241 OR51I1Q9H343 314 aa2.19□□□□□ -2.06
XRN1-213ENST00000489241 HHLA2Q9UM44 414 aa2.19□□□□□ -2.06
XRN1-213ENST00000489241 CHD2O14647 1828 aaKnown RBP2.19□□□□□ -2.06
XRN1-213ENST00000489241 COL18A1P39060 1754 aa2.18□□□□□ -2.06
XRN1-213ENST00000489241 ADAMTSL1Q8N6G6 1762 aa2.18□□□□□ -2.06
XRN1-213ENST00000489241 LOC102725191A0A1B0GVB3 256 aa2.18□□□□□ -2.06
XRN1-213ENST00000489241 GSTZ1O43708 216 aaPredicted RBP2.18□□□□□ -2.06
XRN1-213ENST00000489241 MT-CO2P00403 227 aa2.18□□□□□ -2.06
XRN1-213ENST00000489241 IGLV6-57P01721 117 aa2.18□□□□□ -2.06
XRN1-213ENST00000489241 HIST1H1EP10412 219 aaKnown RBP2.18□□□□□ -2.06
XRN1-213ENST00000489241 ESDP10768 282 aa2.18□□□□□ -2.06
XRN1-213ENST00000489241 CCR7P32248 378 aa2.18□□□□□ -2.06
XRN1-213ENST00000489241 CDKN2CP42773 168 aa2.18□□□□□ -2.06
XRN1-213ENST00000489241 TSPEAR-AS2P59090 65 aa2.18□□□□□ -2.06
XRN1-213ENST00000489241 CST6Q15828 149 aa2.18□□□□□ -2.06
XRN1-213ENST00000489241 LRRC75BQ2VPJ9 315 aa2.18□□□□□ -2.06
XRN1-213ENST00000489241 FAM229BQ4G0N7 80 aa2.18□□□□□ -2.06
XRN1-213ENST00000489241 SAPCD1Q5SSQ6 148 aa2.18□□□□□ -2.06
XRN1-213ENST00000489241 C1orf194Q5T5A4 169 aa2.18□□□□□ -2.06
XRN1-213ENST00000489241 SYPL2Q5VXT5 272 aa2.18□□□□□ -2.06
XRN1-213ENST00000489241 C8orf74Q6P047 294 aa2.18□□□□□ -2.06
XRN1-213ENST00000489241 SFXN4Q6P4A7 337 aa2.18□□□□□ -2.06
XRN1-213ENST00000489241 BAP18Q8IXM2 172 aa2.18□□□□□ -2.06
XRN1-213ENST00000489241 LY6G5BQ8NDX9 201 aa2.18□□□□□ -2.06
XRN1-213ENST00000489241 PPP1R14BQ96C90 147 aa2.18□□□□□ -2.06
XRN1-213ENST00000489241 MS4A6EQ96DS6 147 aa2.18□□□□□ -2.06
XRN1-213ENST00000489241 STACQ99469 402 aa2.18□□□□□ -2.06
XRN1-213ENST00000489241 PKMYT1Q99640 499 aa2.18□□□□□ -2.06
XRN1-213ENST00000489241 HIGD2AQ9BW72 106 aa2.18□□□□□ -2.06
XRN1-213ENST00000489241 C11orf1Q9H5F2 150 aa2.18□□□□□ -2.06
XRN1-213ENST00000489241 C16orf95Q9H693 158 aa2.18□□□□□ -2.06
XRN1-213ENST00000489241 PSCAO43653 123 aa2.17□□□□□ -2.06
XRN1-213ENST00000489241 RPS17P08708 135 aaKnown RBP2.17□□□□□ -2.06
XRN1-213ENST00000489241 P0C880 135 aa2.17□□□□□ -2.06
XRN1-213ENST00000489241 ATP6V0CP27449 155 aa2.17□□□□□ -2.06
XRN1-213ENST00000489241 CDK9P50750 372 aaKnown RBP2.17□□□□□ -2.06
XRN1-213ENST00000489241 CEBPGP53567 150 aa2.17□□□□□ -2.06
XRN1-213ENST00000489241 EMX1Q04741 257 aaPredicted RBP2.17□□□□□ -2.06
XRN1-213ENST00000489241 TMEM176BQ3YBM2 270 aaPredicted RBP2.17□□□□□ -2.06
XRN1-213ENST00000489241 SPIN3Q5JUX0 258 aa2.17□□□□□ -2.06
XRN1-213ENST00000489241 FAM78BQ5VT40 261 aa2.17□□□□□ -2.06
XRN1-213ENST00000489241 SBSNQ6UWP8 590 aa2.17□□□□□ -2.06
XRN1-213ENST00000489241 MSRB3Q8IXL7 192 aa2.17□□□□□ -2.06
XRN1-213ENST00000489241 OR11H1Q8NG94 326 aa2.17□□□□□ -2.06
XRN1-213ENST00000489241 OR10D4PQ8NGN7 298 aa2.17□□□□□ -2.06
XRN1-213ENST00000489241 CMTM2Q8TAZ6 248 aa2.17□□□□□ -2.06
XRN1-213ENST00000489241 C16orf78Q8WTQ4 265 aa2.17□□□□□ -2.06
XRN1-213ENST00000489241 CPNE2Q96FN4 548 aaPredicted RBP2.17□□□□□ -2.06
XRN1-213ENST00000489241 SLC35G5Q96KT7 338 aa2.17□□□□□ -2.06
XRN1-213ENST00000489241 ZNF391Q9UJN7 358 aa2.17□□□□□ -2.06
XRN1-213ENST00000489241 PTPRJQ12913 1337 aa2.17□□□□□ -2.06
XRN1-213ENST00000489241 THSD7AQ9UPZ6 1657 aa2.16□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms