RNA–Protein interactions for RNA: ENST00000489028.1

RFC4-213, Transcript of replication factor C subunit 4, humanhuman

TSL 3

Gene RFC4, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-213ENST00000489028 HLA-DRB3P79483 266 aa1.49□□□□□ -2.17
RFC4-213ENST00000489028 DEFA6Q01524 100 aa1.49□□□□□ -2.17
RFC4-213ENST00000489028 SLC9A3R2Q15599 337 aa1.49□□□□□ -2.17
RFC4-213ENST00000489028 CST6Q15828 149 aa1.49□□□□□ -2.17
RFC4-213ENST00000489028 KRTAP25-1Q3LHN0 102 aa1.49□□□□□ -2.17
RFC4-213ENST00000489028 PYDC2Q56P42 97 aa1.49□□□□□ -2.17
RFC4-213ENST00000489028 FAM78BQ5VT40 261 aa1.49□□□□□ -2.17
RFC4-213ENST00000489028 COMMD7Q86VX2 200 aa1.49□□□□□ -2.17
RFC4-213ENST00000489028 HS3ST5Q8IZT8 346 aa1.49□□□□□ -2.17
RFC4-213ENST00000489028 ZFAND2AQ8N6M9 145 aa1.49□□□□□ -2.17
RFC4-213ENST00000489028 CD200R1Q8TD46 325 aa1.49□□□□□ -2.17
RFC4-213ENST00000489028 OR5P3Q8WZ94 311 aa1.49□□□□□ -2.17
RFC4-213ENST00000489028 PPP1R14BQ96C90 147 aa1.49□□□□□ -2.17
RFC4-213ENST00000489028 OPTNQ96CV9 577 aa1.49□□□□□ -2.17
RFC4-213ENST00000489028 TVP23CQ96ET8 276 aa1.49□□□□□ -2.17
RFC4-213ENST00000489028 TBX5Q99593 518 aa1.49□□□□□ -2.17
RFC4-213ENST00000489028 OR51I2Q9H344 312 aa1.49□□□□□ -2.17
RFC4-213ENST00000489028 FKBP14Q9NWM8 211 aa1.49□□□□□ -2.17
RFC4-213ENST00000489028 EMC3Q9P0I2 261 aa1.49□□□□□ -2.17
RFC4-213ENST00000489028 VPREB3Q9UKI3 123 aa1.49□□□□□ -2.17
RFC4-213ENST00000489028 MCTS1Q9ULC4 181 aaKnown RBP1.49□□□□□ -2.17
RFC4-213ENST00000489028 GUCA1BQ9UMX6 200 aa1.49□□□□□ -2.17
RFC4-213ENST00000489028 MRPS16Q9Y3D3 137 aaKnown RBP1.49□□□□□ -2.17
RFC4-213ENST00000489028 YLPM1P49750 1951 aaKnown RBP1.48□□□□□ -2.17
RFC4-213ENST00000489028 BRD4O60885 1362 aaPredicted RBP1.48□□□□□ -2.17
RFC4-213ENST00000489028 PCNX2A6NKB5 2137 aa1.48□□□□□ -2.17
RFC4-213ENST00000489028 TP53I11O14683 189 aa1.48□□□□□ -2.17
RFC4-213ENST00000489028 TGOLN2O43493 480 aa1.48□□□□□ -2.17
RFC4-213ENST00000489028 GSTZ1O43708 216 aaPredicted RBP1.48□□□□□ -2.17
RFC4-213ENST00000489028 SERPINA6P08185 405 aa1.48□□□□□ -2.17
RFC4-213ENST00000489028 IGHV3-30-3P0DP02 117 aa1.48□□□□□ -2.17
RFC4-213ENST00000489028 UCHL3P15374 230 aa1.48□□□□□ -2.17
RFC4-213ENST00000489028 CD36P16671 472 aa1.48□□□□□ -2.17
RFC4-213ENST00000489028 OR10J1P30954 320 aa1.48□□□□□ -2.17
RFC4-213ENST00000489028 SLCO1A2P46721 670 aa1.48□□□□□ -2.17
RFC4-213ENST00000489028 RAP1GDS1P52306 607 aa1.48□□□□□ -2.17
RFC4-213ENST00000489028 LINC00313P59037 77 aa1.48□□□□□ -2.17
RFC4-213ENST00000489028 FGF12P61328 243 aa1.48□□□□□ -2.17
RFC4-213ENST00000489028 UAP1Q16222 522 aaPredicted RBP1.48□□□□□ -2.17
RFC4-213ENST00000489028 CCDC121Q6ZUS5 278 aa1.48□□□□□ -2.17
RFC4-213ENST00000489028 LYPD6Q86Y78 171 aa1.48□□□□□ -2.17
RFC4-213ENST00000489028 ZNF664Q8N3J9 261 aa1.48□□□□□ -2.17
RFC4-213ENST00000489028 ZNF565Q8N9K5 539 aa1.48□□□□□ -2.17
RFC4-213ENST00000489028 Q8NAQ8 132 aa1.48□□□□□ -2.17
RFC4-213ENST00000489028 TMEM161BQ8NDZ6 487 aa1.48□□□□□ -2.17
RFC4-213ENST00000489028 OR2D3Q8NGH3 330 aa1.48□□□□□ -2.17
RFC4-213ENST00000489028 OR2V1Q8NHB1 315 aa1.48□□□□□ -2.17
RFC4-213ENST00000489028 GPR119Q8TDV5 335 aa1.48□□□□□ -2.17
RFC4-213ENST00000489028 C16orf78Q8WTQ4 265 aa1.48□□□□□ -2.17
RFC4-213ENST00000489028 EEF1AKMT1Q8WVE0 214 aa1.48□□□□□ -2.17
RFC4-213ENST00000489028 CPNE2Q96FN4 548 aaPredicted RBP1.48□□□□□ -2.17
RFC4-213ENST00000489028 ANKRD36BP1Q96IX9 119 aa1.48□□□□□ -2.17
RFC4-213ENST00000489028 C8orf76Q96K31 380 aa1.48□□□□□ -2.17
RFC4-213ENST00000489028 IGF2BP2-AS1Q96M15 143 aa1.48□□□□□ -2.17
RFC4-213ENST00000489028 STACQ99469 402 aa1.48□□□□□ -2.17
RFC4-213ENST00000489028 MND1Q9BWT6 205 aa1.48□□□□□ -2.17
RFC4-213ENST00000489028 NKX6-2Q9C056 277 aaPredicted RBP1.48□□□□□ -2.17
RFC4-213ENST00000489028 HHLA2Q9UM44 414 aa1.48□□□□□ -2.17
RFC4-213ENST00000489028 LSM5Q9Y4Y9 91 aaKnown RBP1.48□□□□□ -2.17
RFC4-213ENST00000489028 PCYT1BQ9Y5K3 369 aaPredicted RBP1.48□□□□□ -2.17
RFC4-213ENST00000489028 OR51B4Q9Y5P0 310 aa1.48□□□□□ -2.17
RFC4-213ENST00000489028 NUP205Q92621 2012 aa1.47□□□□□ -2.17
RFC4-213ENST00000489028 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP1.47□□□□□ -2.17
RFC4-213ENST00000489028 DHRS12A0PJE2 317 aa1.47□□□□□ -2.17
RFC4-213ENST00000489028 IGSF23A1L1A6 192 aa1.47□□□□□ -2.17
RFC4-213ENST00000489028 DISC1C4P0D8 188 aa1.47□□□□□ -2.17
RFC4-213ENST00000489028 CDS2O95674 445 aa1.47□□□□□ -2.17
RFC4-213ENST00000489028 SLC25A16P16260 332 aa1.47□□□□□ -2.17
RFC4-213ENST00000489028 CCR7P32248 378 aa1.47□□□□□ -2.17
RFC4-213ENST00000489028 TCL1AP56279 114 aa1.47□□□□□ -2.17
RFC4-213ENST00000489028 CTBP2P56545 445 aa1.47□□□□□ -2.17
RFC4-213ENST00000489028 TMEM33P57088 247 aa1.47□□□□□ -2.17
RFC4-213ENST00000489028 HOXC5Q00444 222 aa1.47□□□□□ -2.17
RFC4-213ENST00000489028 JOSD1Q15040 202 aaPredicted RBP1.47□□□□□ -2.17
RFC4-213ENST00000489028 RSU1Q15404 277 aa1.47□□□□□ -2.17
RFC4-213ENST00000489028 MRPL51Q4U2R6 128 aaKnown RBP1.47□□□□□ -2.17
RFC4-213ENST00000489028 ACSM3Q53FZ2 586 aa1.47□□□□□ -2.17
RFC4-213ENST00000489028 C1orf195Q5TG92 126 aa1.47□□□□□ -2.17
RFC4-213ENST00000489028 NOXRED1Q6NXP6 359 aa1.47□□□□□ -2.17
RFC4-213ENST00000489028 HIST2H3AQ71DI3 136 aa1.47□□□□□ -2.17
RFC4-213ENST00000489028 GID4Q8IVV7 300 aa1.47□□□□□ -2.17
RFC4-213ENST00000489028 ZNF567Q8N184 647 aa1.47□□□□□ -2.17
RFC4-213ENST00000489028 UBL4BQ8N7F7 174 aa1.47□□□□□ -2.17
RFC4-213ENST00000489028 OR8K1Q8NGG5 319 aa1.47□□□□□ -2.17
RFC4-213ENST00000489028 OR10A6Q8NH74 314 aa1.47□□□□□ -2.17
RFC4-213ENST00000489028 RAD51AP1Q96B01 352 aa1.47□□□□□ -2.17
RFC4-213ENST00000489028 OR8B2Q96RD0 313 aa1.47□□□□□ -2.17
RFC4-213ENST00000489028 MGLLQ99685 303 aa1.47□□□□□ -2.17
RFC4-213ENST00000489028 TMEM109Q9BVC6 243 aa1.47□□□□□ -2.17
RFC4-213ENST00000489028 SNX12Q9UMY4 172 aa1.47□□□□□ -2.17
RFC4-213ENST00000489028 PLB1Q6P1J6 1458 aa1.47□□□□□ -2.17
RFC4-213ENST00000489028 NLRC5Q86WI3 1866 aa1.47□□□□□ -2.17
RFC4-213ENST00000489028 ITGB4P16144 1822 aa1.47□□□□□ -2.17
RFC4-213ENST00000489028 MYO5BQ9ULV0 1848 aa1.47□□□□□ -2.17
RFC4-213ENST00000489028 EVC2Q86UK5 1308 aa1.46□□□□□ -2.18
RFC4-213ENST00000489028 MYO16Q9Y6X6 1858 aa1.46□□□□□ -2.18
RFC4-213ENST00000489028 GRIFINA4D1Z8 144 aa1.46□□□□□ -2.18
RFC4-213ENST00000489028 M0R381 172 aa1.46□□□□□ -2.18
RFC4-213ENST00000489028 RPP14O95059 124 aaKnown RBP1.46□□□□□ -2.18
RFC4-213ENST00000489028 CRYGDP07320 174 aa1.46□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms