RNA–Protein interactions for RNA: ENST00000488912.5

COL21A1-211, Transcript of collagen type XXI alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL21A1, Length 2,327 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1-211ENST00000488912 TMEM200BQ69YZ2 307 aa9.01□□□□□ -0.97
COL21A1-211ENST00000488912 LIN54Q6MZP7 749 aa9.01□□□□□ -0.97
COL21A1-211ENST00000488912 LPCAT3Q6P1A2 487 aa9.01□□□□□ -0.97
COL21A1-211ENST00000488912 ARL6IP6Q8N6S5 226 aa9.01□□□□□ -0.97
COL21A1-211ENST00000488912 OR2AK2Q8NG84 335 aa9.01□□□□□ -0.97
COL21A1-211ENST00000488912 OR8U1Q8NH10 309 aa9.01□□□□□ -0.97
COL21A1-211ENST00000488912 MITD1Q8WV92 249 aa9.01□□□□□ -0.97
COL21A1-211ENST00000488912 NARS2Q96I59 477 aaKnown RBP9.01□□□□□ -0.97
COL21A1-211ENST00000488912 GPHA2Q96T91 129 aa9.01□□□□□ -0.97
COL21A1-211ENST00000488912 TOLLIPQ9H0E2 274 aa9.01□□□□□ -0.97
COL21A1-211ENST00000488912 SLC25A32Q9H2D1 315 aa9.01□□□□□ -0.97
COL21A1-211ENST00000488912 GNG12Q9UBI6 72 aa9.01□□□□□ -0.97
COL21A1-211ENST00000488912 UBE2J1Q9Y385 318 aaPredicted RBP9.01□□□□□ -0.97
COL21A1-211ENST00000488912 RBM7Q9Y580 266 aaKnown RBP9.01□□□□□ -0.97
COL21A1-211ENST00000488912 ARHGAP32A7KAX9 2087 aa9.01□□□□□ -0.97
COL21A1-211ENST00000488912 TEX13DA0A0J9YY54 714 aaPredicted RBP9□□□□□ -0.97
COL21A1-211ENST00000488912 ZNF729A6NN14 1252 aaPredicted RBP9□□□□□ -0.97
COL21A1-211ENST00000488912 HMSDA8MTL9 139 aa9□□□□□ -0.97
COL21A1-211ENST00000488912 TEX46H3BTG2 121 aa9□□□□□ -0.97
COL21A1-211ENST00000488912 GPR31O00270 319 aa9□□□□□ -0.97
COL21A1-211ENST00000488912 IGLV2-14P01704 120 aa9□□□□□ -0.97
COL21A1-211ENST00000488912 CCL3L1P16619 93 aa9□□□□□ -0.97
COL21A1-211ENST00000488912 GPR6P46095 362 aaPredicted RBP9□□□□□ -0.97
COL21A1-211ENST00000488912 RAP2BP61225 183 aa9□□□□□ -0.97
COL21A1-211ENST00000488912 TMUB2Q71RG4 321 aa9□□□□□ -0.97
COL21A1-211ENST00000488912 SLC16A13Q7RTY0 426 aa9□□□□□ -0.97
COL21A1-211ENST00000488912 SGPP2Q8IWX5 399 aa9□□□□□ -0.97
COL21A1-211ENST00000488912 FAM185AQ8N0U4 392 aa9□□□□□ -0.97
COL21A1-211ENST00000488912 PHB2Q99623 299 aa9□□□□□ -0.97
COL21A1-211ENST00000488912 NIT2Q9NQR4 276 aa9□□□□□ -0.97
COL21A1-211ENST00000488912 MIOXQ9UGB7 285 aa9□□□□□ -0.97
COL21A1-211ENST00000488912 JPT1Q9UK76 154 aa9□□□□□ -0.97
COL21A1-211ENST00000488912 PTPN13Q12923 2485 aa9□□□□□ -0.97
COL21A1-211ENST00000488912 TNFSF12O43508 249 aa9□□□□□ -0.97
COL21A1-211ENST00000488912 MMP23AO75900 390 aa9□□□□□ -0.97
COL21A1-211ENST00000488912 ATG12O94817 140 aa9□□□□□ -0.97
COL21A1-211ENST00000488912 IGHV3-7P01780 117 aa9□□□□□ -0.97
COL21A1-211ENST00000488912 WNT2P09544 360 aa9□□□□□ -0.97
COL21A1-211ENST00000488912 ANKRD55Q3KP44 614 aa9□□□□□ -0.97
COL21A1-211ENST00000488912 PRAMEF5Q5TYX0 476 aa9□□□□□ -0.97
COL21A1-211ENST00000488912 OR8B3Q8NGG8 313 aa9□□□□□ -0.97
COL21A1-211ENST00000488912 NEIL1Q96FI4 390 aaPredicted RBP9□□□□□ -0.97
COL21A1-211ENST00000488912 ZNF714Q96N38 554 aa9□□□□□ -0.97
COL21A1-211ENST00000488912 OR8B2Q96RD0 313 aa9□□□□□ -0.97
COL21A1-211ENST00000488912 TCEAL7Q9BRU2 100 aa9□□□□□ -0.97
COL21A1-211ENST00000488912 NAA60Q9H7X0 242 aa9□□□□□ -0.97
COL21A1-211ENST00000488912 LINC00574Q9H8X3 128 aa9□□□□□ -0.97
COL21A1-211ENST00000488912 KCNS2Q9ULS6 477 aa9□□□□□ -0.97
COL21A1-211ENST00000488912 VPS13CQ709C8 3753 aa9□□□□□ -0.97
COL21A1-211ENST00000488912 GOSR2O14653 212 aa8.99□□□□□ -0.97
COL21A1-211ENST00000488912 CLN5O75503 358 aa8.99□□□□□ -0.97
COL21A1-211ENST00000488912 IFNA2P01563 188 aa8.99□□□□□ -0.97
COL21A1-211ENST00000488912 OR5AC1P0C628 307 aa8.99□□□□□ -0.97
COL21A1-211ENST00000488912 SPP1P10451 314 aa8.99□□□□□ -0.97
COL21A1-211ENST00000488912 PVALBP20472 110 aaPredicted RBP8.99□□□□□ -0.97
COL21A1-211ENST00000488912 ERVFRD-1P60508 538 aa8.99□□□□□ -0.97
COL21A1-211ENST00000488912 MORN2Q502X0 79 aa8.99□□□□□ -0.97
COL21A1-211ENST00000488912 KCTD9Q7L273 389 aa8.99□□□□□ -0.97
COL21A1-211ENST00000488912 CCDC71LQ8N9Z2 235 aa8.99□□□□□ -0.97
COL21A1-211ENST00000488912 LEAP2Q969E1 77 aa8.99□□□□□ -0.97
COL21A1-211ENST00000488912 OR2D2Q9H210 308 aa8.99□□□□□ -0.97
COL21A1-211ENST00000488912 GAL3ST2Q9H3Q3 398 aa8.99□□□□□ -0.97
COL21A1-211ENST00000488912 RAB9BQ9NP90 201 aa8.99□□□□□ -0.97
COL21A1-211ENST00000488912 TAS2R3Q9NYW6 316 aa8.99□□□□□ -0.97
COL21A1-211ENST00000488912 LPAR3Q9UBY5 353 aa8.99□□□□□ -0.97
COL21A1-211ENST00000488912 RNF150Q9ULK6 438 aa8.99□□□□□ -0.97
COL21A1-211ENST00000488912 MPPED1O15442 326 aa8.99□□□□□ -0.97
COL21A1-211ENST00000488912 YPEL1O60688 119 aa8.99□□□□□ -0.97
COL21A1-211ENST00000488912 SIX6O95475 246 aa8.99□□□□□ -0.97
COL21A1-211ENST00000488912 FOLR2P14207 255 aa8.99□□□□□ -0.97
COL21A1-211ENST00000488912 NFYBP25208 207 aa8.99□□□□□ -0.97
COL21A1-211ENST00000488912 H2BFSP57053 126 aa8.99□□□□□ -0.97
COL21A1-211ENST00000488912 RND3P61587 244 aa8.99□□□□□ -0.97
COL21A1-211ENST00000488912 SP6Q3SY56 376 aa8.99□□□□□ -0.97
COL21A1-211ENST00000488912 WDR25Q64LD2 544 aaPredicted RBP8.99□□□□□ -0.97
COL21A1-211ENST00000488912 C11orf88Q6PI97 169 aa8.99□□□□□ -0.97
COL21A1-211ENST00000488912 UQCC3Q6UW78 93 aa8.99□□□□□ -0.97
COL21A1-211ENST00000488912 TBC1D26Q86UD7 250 aa8.99□□□□□ -0.97
COL21A1-211ENST00000488912 CMTM1Q8IZ96 169 aa8.99□□□□□ -0.97
COL21A1-211ENST00000488912 BPIFCQ8NFQ6 507 aa8.99□□□□□ -0.97
COL21A1-211ENST00000488912 YPEL2Q96QA6 119 aa8.99□□□□□ -0.97
COL21A1-211ENST00000488912 AGMATQ9BSE5 352 aa8.99□□□□□ -0.97
COL21A1-211ENST00000488912 PATZ1Q9HBE1 687 aaKnown RBP8.99□□□□□ -0.97
COL21A1-211ENST00000488912 GFOD1Q9NXC2 390 aa8.99□□□□□ -0.97
COL21A1-211ENST00000488912 IDI2-AS1Q9NZ38 188 aa8.99□□□□□ -0.97
COL21A1-211ENST00000488912 PSG11Q9UQ72 335 aa8.99□□□□□ -0.97
COL21A1-211ENST00000488912 TRBV23-1A0A0A0MS06 115 aa8.98□□□□□ -0.97
COL21A1-211ENST00000488912 UBE2CO00762 179 aa8.98□□□□□ -0.97
COL21A1-211ENST00000488912 CCSO14618 274 aa8.98□□□□□ -0.97
COL21A1-211ENST00000488912 PHF1O43189 567 aaPredicted RBP8.98□□□□□ -0.97
COL21A1-211ENST00000488912 GUCA2BQ16661 112 aa8.98□□□□□ -0.97
COL21A1-211ENST00000488912 DCAF12L2Q5VW00 463 aa8.98□□□□□ -0.97
COL21A1-211ENST00000488912 DRAM1Q8N682 238 aa8.98□□□□□ -0.97
COL21A1-211ENST00000488912 GALNT14Q96FL9 552 aa8.98□□□□□ -0.97
COL21A1-211ENST00000488912 C5orf30Q96GV9 206 aa8.98□□□□□ -0.97
COL21A1-211ENST00000488912 TP53RKQ96S44 253 aa8.98□□□□□ -0.97
COL21A1-211ENST00000488912 BPESC1Q9GZL8 116 aa8.98□□□□□ -0.97
COL21A1-211ENST00000488912 BARX1Q9HBU1 254 aaPredicted RBP8.98□□□□□ -0.97
COL21A1-211ENST00000488912 ANKRD17O75179 2603 aaKnown RBP8.98□□□□□ -0.97
COL21A1-211ENST00000488912 MED13LQ71F56 2210 aa8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms