RNA–Protein interactions for RNA: ENST00000488834.5

SSR1-209, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 4

Gene SSR1, Length 585 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-209ENST00000488834 ZFYVE16Q7Z3T8 1539 aa2.26□□□□□ -2.05
SSR1-209ENST00000488834 LTN1O94822 1766 aa2.26□□□□□ -2.05
SSR1-209ENST00000488834 DISP2A7MBM2 1401 aa2.25□□□□□ -2.05
SSR1-209ENST00000488834 ATRNO75882 1429 aa2.25□□□□□ -2.05
SSR1-209ENST00000488834 RGPD1P0DJD0 1748 aa2.25□□□□□ -2.05
SSR1-209ENST00000488834 ROBO3Q96MS0 1386 aa2.25□□□□□ -2.05
SSR1-209ENST00000488834 C2orf16Q68DN1 1984 aa2.25□□□□□ -2.05
SSR1-209ENST00000488834 RIMBP3CA6NJZ7 1639 aa2.25□□□□□ -2.05
SSR1-209ENST00000488834 RIMBP3BA6NNM3 1639 aa2.25□□□□□ -2.05
SSR1-209ENST00000488834 ZCCHC11Q5TAX3 1644 aaKnown RBP2.25□□□□□ -2.05
SSR1-209ENST00000488834 RAPGEF6Q8TEU7 1601 aa2.25□□□□□ -2.05
SSR1-209ENST00000488834 MADDQ8WXG6 1647 aa2.25□□□□□ -2.05
SSR1-209ENST00000488834 PHRF1Q9P1Y6 1649 aaKnown RBP2.25□□□□□ -2.05
SSR1-209ENST00000488834 IGHV3-66A0A0C4DH42 116 aa2.25□□□□□ -2.05
SSR1-209ENST00000488834 TMEM218A2RU14 115 aa2.25□□□□□ -2.05
SSR1-209ENST00000488834 A6NDN8 102 aa2.25□□□□□ -2.05
SSR1-209ENST00000488834 RPL36A-HNRNPH2H7BZ11 118 aa2.25□□□□□ -2.05
SSR1-209ENST00000488834 M0R1B8 84 aa2.25□□□□□ -2.05
SSR1-209ENST00000488834 ZNF593O00488 134 aaPredicted RBP2.25□□□□□ -2.05
SSR1-209ENST00000488834 TPST1O60507 370 aa2.25□□□□□ -2.05
SSR1-209ENST00000488834 IGF2P01344 180 aa2.25□□□□□ -2.05
SSR1-209ENST00000488834 IGKV1-17P01599 117 aa2.25□□□□□ -2.05
SSR1-209ENST00000488834 CD8AP01732 235 aa2.25□□□□□ -2.05
SSR1-209ENST00000488834 HLA-AP01891 365 aaKnown RBP2.25□□□□□ -2.05
SSR1-209ENST00000488834 TCRBP04435 133 aa2.25□□□□□ -2.05
SSR1-209ENST00000488834 OR5AL1P0C617 328 aa2.25□□□□□ -2.05
SSR1-209ENST00000488834 TSPAN19P0C672 248 aa2.25□□□□□ -2.05
SSR1-209ENST00000488834 CD37P11049 281 aa2.25□□□□□ -2.05
SSR1-209ENST00000488834 KCNE1P15382 129 aa2.25□□□□□ -2.05
SSR1-209ENST00000488834 SDC4P31431 198 aa2.25□□□□□ -2.05
SSR1-209ENST00000488834 HRH1P35367 487 aa2.25□□□□□ -2.05
SSR1-209ENST00000488834 CDKN2BP42772 138 aa2.25□□□□□ -2.05
SSR1-209ENST00000488834 IDH2P48735 452 aaKnown RBP2.25□□□□□ -2.05
SSR1-209ENST00000488834 RND2P52198 227 aa2.25□□□□□ -2.05
SSR1-209ENST00000488834 VSX2P58304 361 aaPredicted RBP2.25□□□□□ -2.05
SSR1-209ENST00000488834 KRTAP10-10P60014 251 aa2.25□□□□□ -2.05
SSR1-209ENST00000488834 PPP1CBP62140 327 aa2.25□□□□□ -2.05
SSR1-209ENST00000488834 DEFA5Q01523 94 aa2.25□□□□□ -2.05
SSR1-209ENST00000488834 CD164Q04900 197 aa2.25□□□□□ -2.05
SSR1-209ENST00000488834 MXD1Q05195 221 aa2.25□□□□□ -2.05
SSR1-209ENST00000488834 AESQ08117 197 aa2.25□□□□□ -2.05
SSR1-209ENST00000488834 SKP2Q13309 424 aa2.25□□□□□ -2.05
SSR1-209ENST00000488834 PEA15Q15121 130 aa2.25□□□□□ -2.05
SSR1-209ENST00000488834 TMED2Q15363 201 aa2.25□□□□□ -2.05
SSR1-209ENST00000488834 SURF2Q15527 256 aaPredicted RBP2.25□□□□□ -2.05
SSR1-209ENST00000488834 SLC9A3R2Q15599 337 aa2.25□□□□□ -2.05
SSR1-209ENST00000488834 POU2AF1Q16633 256 aa2.25□□□□□ -2.05
SSR1-209ENST00000488834 PYCR3Q53H96 274 aa2.25□□□□□ -2.05
SSR1-209ENST00000488834 MESTQ5EB52 335 aa2.25□□□□□ -2.05
SSR1-209ENST00000488834 OR2T5Q6IEZ7 315 aa2.25□□□□□ -2.05
SSR1-209ENST00000488834 IGFL1Q6UW32 110 aa2.25□□□□□ -2.05
SSR1-209ENST00000488834 TCF24Q7RTU0 167 aa2.25□□□□□ -2.05
SSR1-209ENST00000488834 MRPL55Q7Z7F7 128 aaKnown RBP2.25□□□□□ -2.05
SSR1-209ENST00000488834 LRRC28Q86X40 367 aaPredicted RBP2.25□□□□□ -2.05
SSR1-209ENST00000488834 TRAPPC5Q8IUR0 188 aa2.25□□□□□ -2.05
SSR1-209ENST00000488834 SVBPQ8N300 66 aa2.25□□□□□ -2.05
SSR1-209ENST00000488834 ACBD7Q8N6N7 88 aa2.25□□□□□ -2.05
SSR1-209ENST00000488834 ZNF615Q8N8J6 731 aa2.25□□□□□ -2.05
SSR1-209ENST00000488834 OR52E2Q8NGJ4 325 aa2.25□□□□□ -2.05
SSR1-209ENST00000488834 OR2T29Q8NH02 315 aa2.25□□□□□ -2.05
SSR1-209ENST00000488834 OR5W2Q8NH69 310 aa2.25□□□□□ -2.05
SSR1-209ENST00000488834 OR4S2Q8NH73 311 aa2.25□□□□□ -2.05
SSR1-209ENST00000488834 TERB2Q8NHR7 220 aa2.25□□□□□ -2.05
SSR1-209ENST00000488834 SPPL2BQ8TCT7 592 aa2.25□□□□□ -2.05
SSR1-209ENST00000488834 CD200R1Q8TD46 325 aa2.25□□□□□ -2.05
SSR1-209ENST00000488834 LCN9Q8WX39 176 aa2.25□□□□□ -2.05
SSR1-209ENST00000488834 TMEM230Q96A57 120 aa2.25□□□□□ -2.05
SSR1-209ENST00000488834 CMBLQ96DG6 245 aa2.25□□□□□ -2.05
SSR1-209ENST00000488834 SMIM12Q96EX1 92 aa2.25□□□□□ -2.05
SSR1-209ENST00000488834 SMIM8Q96KF7 97 aa2.25□□□□□ -2.05
SSR1-209ENST00000488834 RDH12Q96NR8 316 aa2.25□□□□□ -2.05
SSR1-209ENST00000488834 RNF157Q96PX1 679 aa2.25□□□□□ -2.05
SSR1-209ENST00000488834 STACQ99469 402 aa2.25□□□□□ -2.05
SSR1-209ENST00000488834 C20orf144Q9BQM9 153 aa2.25□□□□□ -2.05
SSR1-209ENST00000488834 MARVELD1Q9BSK0 173 aa2.25□□□□□ -2.05
SSR1-209ENST00000488834 SLC25A2Q9BXI2 301 aa2.25□□□□□ -2.05
SSR1-209ENST00000488834 SNHG12Q9BXW3 62 aa2.25□□□□□ -2.05
SSR1-209ENST00000488834 ARL6Q9H0F7 186 aa2.25□□□□□ -2.05
SSR1-209ENST00000488834 DUSP21Q9H596 190 aa2.25□□□□□ -2.05
SSR1-209ENST00000488834 ABCB9Q9NP78 766 aa2.25□□□□□ -2.05
SSR1-209ENST00000488834 SLC2A9Q9NRM0 540 aa2.25□□□□□ -2.05
SSR1-209ENST00000488834 GNG8Q9UK08 70 aa2.25□□□□□ -2.05
SSR1-209ENST00000488834 SLC7A11Q9UPY5 501 aa2.25□□□□□ -2.05
SSR1-209ENST00000488834 ST3GAL6Q9Y274 331 aa2.25□□□□□ -2.05
SSR1-209ENST00000488834 CARHSP1Q9Y2V2 147 aaKnown RBP2.25□□□□□ -2.05
SSR1-209ENST00000488834 NEXMIFQ5QGS0 1516 aa2.25□□□□□ -2.05
SSR1-209ENST00000488834 NALCNQ8IZF0 1738 aa2.25□□□□□ -2.05
SSR1-209ENST00000488834 CRB1P82279 1406 aa2.25□□□□□ -2.05
SSR1-209ENST00000488834 PIK3C2BO00750 1634 aa2.24□□□□□ -2.05
SSR1-209ENST00000488834 PDCD11Q14690 1871 aaKnown RBP2.24□□□□□ -2.05
SSR1-209ENST00000488834 MED1Q15648 1581 aaPredicted RBP2.24□□□□□ -2.05
SSR1-209ENST00000488834 SCN11AQ9UI33 1791 aa2.24□□□□□ -2.05
SSR1-209ENST00000488834 TRPM2O94759 1503 aa2.24□□□□□ -2.05
SSR1-209ENST00000488834 TULP4Q9NRJ4 1543 aa2.24□□□□□ -2.05
SSR1-209ENST00000488834 A0A087WUJ7 227 aa2.24□□□□□ -2.05
SSR1-209ENST00000488834 A0A087X0T9 212 aa2.24□□□□□ -2.05
SSR1-209ENST00000488834 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP2.24□□□□□ -2.05
SSR1-209ENST00000488834 IGHV5-51A0A0C4DH38 117 aa2.24□□□□□ -2.05
SSR1-209ENST00000488834 SPRR5A0A1B0GTR4 108 aa2.24□□□□□ -2.05
SSR1-209ENST00000488834 EXOC1LA0A1B0GW35 172 aa2.24□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms