RNA–Protein interactions for RNA: ENST00000488683.1

CLIC4-202, Transcript of chloride intracellular channel 4, humanhuman

TSL 2

Gene CLIC4, Length 2,723 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC4-202ENST00000488683 LSM10Q969L4 123 aaKnown RBP10.64□□□□□ -0.71
CLIC4-202ENST00000488683 RAB40CQ96S21 281 aa10.64□□□□□ -0.71
CLIC4-202ENST00000488683 AURKAIP1Q9NWT8 199 aaPredicted RBP10.64□□□□□ -0.71
CLIC4-202ENST00000488683 IFITM10A6NMD0 228 aa10.63□□□□□ -0.71
CLIC4-202ENST00000488683 CEBPZOSA8MTT3 80 aa10.63□□□□□ -0.71
CLIC4-202ENST00000488683 ZG16O60844 167 aa10.63□□□□□ -0.71
CLIC4-202ENST00000488683 WNT2P09544 360 aa10.63□□□□□ -0.71
CLIC4-202ENST00000488683 TFF3Q07654 80 aa10.63□□□□□ -0.71
CLIC4-202ENST00000488683 KIAA0141Q14154 515 aaPredicted RBP10.63□□□□□ -0.71
CLIC4-202ENST00000488683 ZNF506Q5JVG8 444 aa10.63□□□□□ -0.71
CLIC4-202ENST00000488683 HEPN1Q6WQI6 88 aa10.63□□□□□ -0.71
CLIC4-202ENST00000488683 LRP11Q86VZ4 500 aa10.63□□□□□ -0.71
CLIC4-202ENST00000488683 C11orf53Q8IXP5 236 aa10.63□□□□□ -0.71
CLIC4-202ENST00000488683 C9orf106Q8NAJ2 232 aa10.63□□□□□ -0.71
CLIC4-202ENST00000488683 SCGB1C1Q8TD33 95 aa10.63□□□□□ -0.71
CLIC4-202ENST00000488683 COQ2Q96H96 371 aa10.63□□□□□ -0.71
CLIC4-202ENST00000488683 RCC1LQ96I51 464 aaKnown RBP10.63□□□□□ -0.71
CLIC4-202ENST00000488683 GMPPAQ96IJ6 420 aaPredicted RBP10.63□□□□□ -0.71
CLIC4-202ENST00000488683 SMDT1Q9H4I9 107 aa10.63□□□□□ -0.71
CLIC4-202ENST00000488683 POLDIP2Q9Y2S7 368 aa10.63□□□□□ -0.71
CLIC4-202ENST00000488683 DCHS2Q6V1P9 2916 aa10.63□□□□□ -0.71
CLIC4-202ENST00000488683 BTBD17A6NE02 478 aa10.63□□□□□ -0.71
CLIC4-202ENST00000488683 UBE2CO00762 179 aa10.63□□□□□ -0.71
CLIC4-202ENST00000488683 HBZP02008 142 aa10.63□□□□□ -0.71
CLIC4-202ENST00000488683 TRGC2P03986 189 aa10.63□□□□□ -0.71
CLIC4-202ENST00000488683 TNFSF10P50591 281 aa10.63□□□□□ -0.71
CLIC4-202ENST00000488683 WDR25Q64LD2 544 aaPredicted RBP10.63□□□□□ -0.71
CLIC4-202ENST00000488683 MOB1BQ7L9L4 216 aa10.63□□□□□ -0.71
CLIC4-202ENST00000488683 OR13A1Q8NGR1 328 aa10.63□□□□□ -0.71
CLIC4-202ENST00000488683 OPN3Q9H1Y3 402 aaPredicted RBP10.63□□□□□ -0.71
CLIC4-202ENST00000488683 WIPI2Q9Y4P8 454 aa10.63□□□□□ -0.71
CLIC4-202ENST00000488683 ZNF292O60281 2723 aa10.62□□□□□ -0.71
CLIC4-202ENST00000488683 YLPM1P49750 1951 aaKnown RBP10.62□□□□□ -0.71
CLIC4-202ENST00000488683 LINC00473A8K010 186 aa10.62□□□□□ -0.71
CLIC4-202ENST00000488683 DFFBO76075 338 aa10.62□□□□□ -0.71
CLIC4-202ENST00000488683 EGR1P18146 543 aa10.62□□□□□ -0.71
CLIC4-202ENST00000488683 IL2RGP31785 369 aa10.62□□□□□ -0.71
CLIC4-202ENST00000488683 TLE4Q04727 773 aa10.62□□□□□ -0.71
CLIC4-202ENST00000488683 GABRA6Q16445 453 aa10.62□□□□□ -0.71
CLIC4-202ENST00000488683 GCSAMLQ5JQS6 135 aa10.62□□□□□ -0.71
CLIC4-202ENST00000488683 VHLLQ6RSH7 139 aa10.62□□□□□ -0.71
CLIC4-202ENST00000488683 RPRMLQ8N4K4 120 aa10.62□□□□□ -0.71
CLIC4-202ENST00000488683 TCTEX1D2Q8WW35 142 aa10.62□□□□□ -0.71
CLIC4-202ENST00000488683 CLCF1Q9UBD9 225 aa10.62□□□□□ -0.71
CLIC4-202ENST00000488683 IQCF6A8MYZ5 107 aa10.62□□□□□ -0.71
CLIC4-202ENST00000488683 SH2D1BO14796 132 aa10.62□□□□□ -0.71
CLIC4-202ENST00000488683 CD200P41217 278 aa10.62□□□□□ -0.71
CLIC4-202ENST00000488683 RTP5Q14D33 572 aa10.62□□□□□ -0.71
CLIC4-202ENST00000488683 FAM90A2PQ658T7 463 aa10.62□□□□□ -0.71
CLIC4-202ENST00000488683 ACSM6Q6P461 480 aa10.62□□□□□ -0.71
CLIC4-202ENST00000488683 Q8IYB0 196 aa10.62□□□□□ -0.71
CLIC4-202ENST00000488683 NIPSNAP3BQ9BS92 247 aa10.62□□□□□ -0.71
CLIC4-202ENST00000488683 TMEM9BQ9NQ34 198 aa10.62□□□□□ -0.71
CLIC4-202ENST00000488683 LIN7CQ9NUP9 197 aaKnown RBP10.62□□□□□ -0.71
CLIC4-202ENST00000488683 PSG11Q9UQ72 335 aa10.62□□□□□ -0.71
CLIC4-202ENST00000488683 LOC102723971A0A1B0GUV8 181 aa10.61□□□□□ -0.71
CLIC4-202ENST00000488683 ODAMA1E959 279 aa10.61□□□□□ -0.71
CLIC4-202ENST00000488683 IGHV2-5P01817 119 aa10.61□□□□□ -0.71
CLIC4-202ENST00000488683 HSPB1P04792 205 aaKnown RBP10.61□□□□□ -0.71
CLIC4-202ENST00000488683 SELLP14151 372 aa10.61□□□□□ -0.71
CLIC4-202ENST00000488683 RAC2P15153 192 aa10.61□□□□□ -0.71
CLIC4-202ENST00000488683 SLC38A11Q08AI6 406 aa10.61□□□□□ -0.71
CLIC4-202ENST00000488683 MSMPQ1L6U9 139 aa10.61□□□□□ -0.71
CLIC4-202ENST00000488683 Q3ZCU0 254 aa10.61□□□□□ -0.71
CLIC4-202ENST00000488683 RPP25LQ8N5L8 163 aaKnown RBP10.61□□□□□ -0.71
CLIC4-202ENST00000488683 DUSP13Q9UII6 198 aa10.61□□□□□ -0.71
CLIC4-202ENST00000488683 PKDREJQ9NTG1 2253 aa10.61□□□□□ -0.71
CLIC4-202ENST00000488683 TET2Q6N021 2002 aaPredicted RBP10.61□□□□□ -0.71
CLIC4-202ENST00000488683 PTPRBP23467 1997 aa10.61□□□□□ -0.71
CLIC4-202ENST00000488683 TIMM8AO60220 97 aaPredicted RBP10.61□□□□□ -0.71
CLIC4-202ENST00000488683 COL10A1Q03692 680 aa10.61□□□□□ -0.71
CLIC4-202ENST00000488683 TMEM178AQ8NBL3 297 aa10.61□□□□□ -0.71
CLIC4-202ENST00000488683 DEFB124Q8NES8 71 aa10.61□□□□□ -0.71
CLIC4-202ENST00000488683 RPUSD4Q96CM3 377 aaKnown RBP10.61□□□□□ -0.71
CLIC4-202ENST00000488683 TMEM204Q9BSN7 226 aa10.61□□□□□ -0.71
CLIC4-202ENST00000488683 HES4Q9HCC6 221 aa10.61□□□□□ -0.71
CLIC4-202ENST00000488683 MRPL49Q13405 166 aaKnown RBP10.6□□□□□ -0.71
CLIC4-202ENST00000488683 MALSU1Q96EH3 234 aa10.6□□□□□ -0.71
CLIC4-202ENST00000488683 HIPK2Q9H2X6 1198 aa10.6□□□□□ -0.71
CLIC4-202ENST00000488683 GSN-AS1Q9NRJ2 163 aa10.6□□□□□ -0.71
CLIC4-202ENST00000488683 ASH1LQ9NR48 2969 aaKnown RBP10.6□□□□□ -0.71
CLIC4-202ENST00000488683 C1QTNF9BB2RNN3 333 aa10.6□□□□□ -0.71
CLIC4-202ENST00000488683 J3QW42 95 aa10.6□□□□□ -0.71
CLIC4-202ENST00000488683 CECR9P0C854 216 aa10.6□□□□□ -0.71
CLIC4-202ENST00000488683 MAS1LP35410 378 aa10.6□□□□□ -0.71
CLIC4-202ENST00000488683 KIR2DL2P43627 348 aaPredicted RBP10.6□□□□□ -0.71
CLIC4-202ENST00000488683 TGFBR3Q03167 851 aa10.6□□□□□ -0.71
CLIC4-202ENST00000488683 DUX4L9Q6RFH8 374 aaPredicted RBP10.6□□□□□ -0.71
CLIC4-202ENST00000488683 FAM214BQ7L5A3 538 aa10.6□□□□□ -0.71
CLIC4-202ENST00000488683 TVP23CQ96ET8 276 aa10.6□□□□□ -0.71
CLIC4-202ENST00000488683 LOXL4Q96JB6 756 aa10.6□□□□□ -0.71
CLIC4-202ENST00000488683 MIOXQ9UGB7 285 aa10.6□□□□□ -0.71
CLIC4-202ENST00000488683 TRAV20A0A0B4J274 112 aa10.59□□□□□ -0.71
CLIC4-202ENST00000488683 MAP1LC3B2A6NCE7 125 aa10.59□□□□□ -0.71
CLIC4-202ENST00000488683 AP4M1O00189 453 aa10.59□□□□□ -0.71
CLIC4-202ENST00000488683 PPIHO43447 177 aaKnown RBP10.59□□□□□ -0.71
CLIC4-202ENST00000488683 FABP1P07148 127 aa10.59□□□□□ -0.71
CLIC4-202ENST00000488683 TNFRSF9Q07011 255 aa10.59□□□□□ -0.71
CLIC4-202ENST00000488683 TRIP6Q15654 476 aaKnown RBP10.59□□□□□ -0.71
CLIC4-202ENST00000488683 LRRC75BQ2VPJ9 315 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 73 ms