RNA–Protein interactions for RNA: ENST00000487747.5

SMC4-219, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 637 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-219ENST00000487747 IGKV3D-7A0A0C4DH55 119 aa0.32□□□□□ -2.36
SMC4-219ENST00000487747 IGKV3OR2-268A0A0C4DH90 116 aa0.32□□□□□ -2.36
SMC4-219ENST00000487747 A0A1W2PQD3 144 aa0.32□□□□□ -2.36
SMC4-219ENST00000487747 RAB19A4D1S5 217 aa0.32□□□□□ -2.36
SMC4-219ENST00000487747 RFPL4AA6NLU0 287 aa0.32□□□□□ -2.36
SMC4-219ENST00000487747 RFPL4AL1F8VTS6 287 aa0.32□□□□□ -2.36
SMC4-219ENST00000487747 F8W036 122 aa0.32□□□□□ -2.36
SMC4-219ENST00000487747 M0QYV0 167 aa0.32□□□□□ -2.36
SMC4-219ENST00000487747 SYNGR1O43759 233 aa0.32□□□□□ -2.36
SMC4-219ENST00000487747 MRPS14O60783 128 aaKnown RBP0.32□□□□□ -2.36
SMC4-219ENST00000487747 ZNF737O75373 536 aa0.32□□□□□ -2.36
SMC4-219ENST00000487747 NDUFB2O95178 105 aa0.32□□□□□ -2.36
SMC4-219ENST00000487747 FADS2O95864 444 aaKnown RBP0.32□□□□□ -2.36
SMC4-219ENST00000487747 IGKV2D-40P01614 121 aaPredicted RBP0.32□□□□□ -2.36
SMC4-219ENST00000487747 UCHL1P09936 223 aa0.32□□□□□ -2.36
SMC4-219ENST00000487747 SLC35E2BP0CK96 405 aa0.32□□□□□ -2.36
SMC4-219ENST00000487747 LIMS3P0CW19 117 aa0.32□□□□□ -2.36
SMC4-219ENST00000487747 LIMS4P0CW20 117 aa0.32□□□□□ -2.36
SMC4-219ENST00000487747 RCVRNP35243 200 aa0.32□□□□□ -2.36
SMC4-219ENST00000487747 HSPA9P38646 679 aaKnown RBP0.32□□□□□ -2.36
SMC4-219ENST00000487747 SULT1A2P50226 295 aa0.32□□□□□ -2.36
SMC4-219ENST00000487747 RBM11P57052 281 aaKnown RBP0.32□□□□□ -2.36
SMC4-219ENST00000487747 TAS2R45P59539 299 aa0.32□□□□□ -2.36
SMC4-219ENST00000487747 GLO1Q04760 184 aa0.32□□□□□ -2.36
SMC4-219ENST00000487747 RAB31Q13636 194 aa0.32□□□□□ -2.36
SMC4-219ENST00000487747 AMTNQ6UX39 209 aa0.32□□□□□ -2.36
SMC4-219ENST00000487747 LRRC28Q86X40 367 aaPredicted RBP0.32□□□□□ -2.36
SMC4-219ENST00000487747 LRRC6Q86X45 466 aa0.32□□□□□ -2.36
SMC4-219ENST00000487747 OR8B12Q8NGG6 310 aa0.32□□□□□ -2.36
SMC4-219ENST00000487747 OR2D3Q8NGH3 330 aa0.32□□□□□ -2.36
SMC4-219ENST00000487747 MIEN1Q9BRT3 115 aa0.32□□□□□ -2.36
SMC4-219ENST00000487747 VCX3BQ9H321 246 aa0.32□□□□□ -2.36
SMC4-219ENST00000487747 C8orf4Q9NR00 106 aa0.32□□□□□ -2.36
SMC4-219ENST00000487747 ENPP5Q9UJA9 477 aa0.32□□□□□ -2.36
SMC4-219ENST00000487747 DNAJC12Q9UKB3 198 aa0.32□□□□□ -2.36
SMC4-219ENST00000487747 POFUT2Q9Y2G5 429 aa0.32□□□□□ -2.36
SMC4-219ENST00000487747 KLK5Q9Y337 293 aaPredicted RBP0.32□□□□□ -2.36
SMC4-219ENST00000487747 NPATQ14207 1427 aa0.31□□□□□ -2.36
SMC4-219ENST00000487747 CPAMD8Q8IZJ3 1885 aa0.31□□□□□ -2.36
SMC4-219ENST00000487747 DICER1Q9UPY3 1922 aaKnown RBP0.31□□□□□ -2.36
SMC4-219ENST00000487747 NUP153P49790 1475 aaKnown RBP0.31□□□□□ -2.36
SMC4-219ENST00000487747 TRBV6-5A0A0K0K1A5 114 aa0.31□□□□□ -2.36
SMC4-219ENST00000487747 F5H5K5 113 aa0.31□□□□□ -2.36
SMC4-219ENST00000487747 NDUFS8O00217 210 aa0.31□□□□□ -2.36
SMC4-219ENST00000487747 PGLYRP1O75594 196 aaPredicted RBP0.31□□□□□ -2.36
SMC4-219ENST00000487747 PSMG1O95456 288 aa0.31□□□□□ -2.36
SMC4-219ENST00000487747 SNAP29O95721 258 aa0.31□□□□□ -2.36
SMC4-219ENST00000487747 GP1BAP07359 652 aa0.31□□□□□ -2.36
SMC4-219ENST00000487747 IVLP07476 585 aa0.31□□□□□ -2.36
SMC4-219ENST00000487747 OR13C7P0DN81 318 aa0.31□□□□□ -2.36
SMC4-219ENST00000487747 OR10J1P30954 320 aa0.31□□□□□ -2.36
SMC4-219ENST00000487747 STC1P52823 247 aa0.31□□□□□ -2.36
SMC4-219ENST00000487747 SLC38A11Q08AI6 406 aa0.31□□□□□ -2.36
SMC4-219ENST00000487747 XRCC4Q13426 336 aa0.31□□□□□ -2.36
SMC4-219ENST00000487747 OR4D1Q15615 310 aa0.31□□□□□ -2.36
SMC4-219ENST00000487747 NNATQ16517 81 aa0.31□□□□□ -2.36
SMC4-219ENST00000487747 EXOC3L4Q17RC7 722 aa0.31□□□□□ -2.36
SMC4-219ENST00000487747 LGALS9BQ3B8N2 356 aa0.31□□□□□ -2.36
SMC4-219ENST00000487747 TTC33Q6PID6 262 aaPredicted RBP0.31□□□□□ -2.36
SMC4-219ENST00000487747 XKRXQ6PP77 449 aa0.31□□□□□ -2.36
SMC4-219ENST00000487747 CCDC112Q8NEF3 446 aa0.31□□□□□ -2.36
SMC4-219ENST00000487747 LRRC20Q8TCA0 184 aa0.31□□□□□ -2.36
SMC4-219ENST00000487747 MSANTD3Q96H12 275 aa0.31□□□□□ -2.36
SMC4-219ENST00000487747 ACBD6Q9BR61 282 aa0.31□□□□□ -2.36
SMC4-219ENST00000487747 GLS2Q9UI32 602 aa0.31□□□□□ -2.36
SMC4-219ENST00000487747 SNX10Q9Y5X0 201 aa0.31□□□□□ -2.36
SMC4-219ENST00000487747 TECTAO75443 2155 aa0.3□□□□□ -2.36
SMC4-219ENST00000487747 PTPRSQ13332 1948 aa0.3□□□□□ -2.36
SMC4-219ENST00000487747 MUC5ACP98088 5654 aa0.3□□□□□ -2.36
SMC4-219ENST00000487747 IGKV3-7A0A075B6H7 116 aa0.3□□□□□ -2.36
SMC4-219ENST00000487747 BHLHE40O14503 412 aa0.3□□□□□ -2.36
SMC4-219ENST00000487747 BRI3O95415 125 aa0.3□□□□□ -2.36
SMC4-219ENST00000487747 GPX2P18283 190 aa0.3□□□□□ -2.36
SMC4-219ENST00000487747 AGTR1P30556 359 aa0.3□□□□□ -2.36
SMC4-219ENST00000487747 LCN1P31025 176 aa0.3□□□□□ -2.36
SMC4-219ENST00000487747 CA7P43166 264 aa0.3□□□□□ -2.36
SMC4-219ENST00000487747 RPL27AP46776 148 aaKnown RBP0.3□□□□□ -2.36
SMC4-219ENST00000487747 TAS2R30P59541 319 aa0.3□□□□□ -2.36
SMC4-219ENST00000487747 SNAP25P60880 206 aa0.3□□□□□ -2.36
SMC4-219ENST00000487747 TNNC1P63316 161 aa0.3□□□□□ -2.36
SMC4-219ENST00000487747 HOXC5Q00444 222 aa0.3□□□□□ -2.36
SMC4-219ENST00000487747 MESTQ5EB52 335 aa0.3□□□□□ -2.36
SMC4-219ENST00000487747 TMEM42Q69YG0 159 aa0.3□□□□□ -2.36
SMC4-219ENST00000487747 DRAM2Q6UX65 266 aa0.3□□□□□ -2.36
SMC4-219ENST00000487747 SPATA12Q7Z6I5 190 aa0.3□□□□□ -2.36
SMC4-219ENST00000487747 SLC35E3Q7Z769 313 aa0.3□□□□□ -2.36
SMC4-219ENST00000487747 CYGBQ8WWM9 190 aa0.3□□□□□ -2.36
SMC4-219ENST00000487747 CCDC127Q96BQ5 260 aa0.3□□□□□ -2.36
SMC4-219ENST00000487747 CPNE2Q96FN4 548 aaPredicted RBP0.3□□□□□ -2.36
SMC4-219ENST00000487747 TMEM56Q96MV1 263 aa0.3□□□□□ -2.36
SMC4-219ENST00000487747 SERPINB11Q96P15 392 aa0.3□□□□□ -2.36
SMC4-219ENST00000487747 OR7D2Q96RA2 312 aa0.3□□□□□ -2.36
SMC4-219ENST00000487747 SLC2A9Q9NRM0 540 aa0.3□□□□□ -2.36
SMC4-219ENST00000487747 MED9Q9NWA0 146 aa0.3□□□□□ -2.36
SMC4-219ENST00000487747 MS4A12Q9NXJ0 267 aa0.3□□□□□ -2.36
SMC4-219ENST00000487747 REREQ9P2R6 1566 aa0.3□□□□□ -2.36
SMC4-219ENST00000487747 HEATR5BQ9P2D3 2071 aa0.29□□□□□ -2.36
SMC4-219ENST00000487747 MEIKINA0A087WXM9 373 aa0.29□□□□□ -2.36
SMC4-219ENST00000487747 H0YC42 278 aa0.29□□□□□ -2.36
SMC4-219ENST00000487747 CIAO1O76071 339 aa0.29□□□□□ -2.36
Retrieved 100 of 20,778 RNA–protein pairs in 225.8 ms