RNA–Protein interactions for RNA: ENST00000487245.5

HLA-C-208, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 1,880 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-208ENST00000487245 CACNA1GO43497 2377 aa21.87■■□□□ 1.09
HLA-C-208ENST00000487245 CACNA1HO95180 2353 aa21.87■■□□□ 1.09
HLA-C-208ENST00000487245 OR2B8PP59922 312 aa21.86■■□□□ 1.09
HLA-C-208ENST00000487245 TNFRSF9Q07011 255 aa21.86■■□□□ 1.09
HLA-C-208ENST00000487245 ELOBQ15370 118 aa21.86■■□□□ 1.09
HLA-C-208ENST00000487245 TRAT1Q6PIZ9 186 aa21.86■■□□□ 1.09
HLA-C-208ENST00000487245 NINJ1Q92982 152 aa21.86■■□□□ 1.09
HLA-C-208ENST00000487245 RCC1LQ96I51 464 aaKnown RBP21.86■■□□□ 1.09
HLA-C-208ENST00000487245 OR4C12Q96R67 309 aa21.86■■□□□ 1.09
HLA-C-208ENST00000487245 GNG13Q9P2W3 67 aa21.86■■□□□ 1.09
HLA-C-208ENST00000487245 ATP6V1FQ16864 119 aa21.86■■□□□ 1.09
HLA-C-208ENST00000487245 RBMS3Q6XE24 437 aaKnown RBP21.86■■□□□ 1.09
HLA-C-208ENST00000487245 ZNF251Q9BRH9 671 aa21.86■■□□□ 1.09
HLA-C-208ENST00000487245 RBKSQ9H477 322 aa21.86■■□□□ 1.09
HLA-C-208ENST00000487245 VSIRQ9H7M9 311 aa21.86■■□□□ 1.09
HLA-C-208ENST00000487245 ZNF727A8MUV8 499 aa21.85■■□□□ 1.09
HLA-C-208ENST00000487245 HBZP02008 142 aa21.85■■□□□ 1.09
HLA-C-208ENST00000487245 CEBPGP53567 150 aa21.85■■□□□ 1.09
HLA-C-208ENST00000487245 PAX5Q02548 391 aa21.85■■□□□ 1.09
HLA-C-208ENST00000487245 AESQ08117 197 aa21.85■■□□□ 1.09
HLA-C-208ENST00000487245 SLC38A11Q08AI6 406 aa21.85■■□□□ 1.09
HLA-C-208ENST00000487245 C3orf36Q3SXR2 165 aa21.85■■□□□ 1.09
HLA-C-208ENST00000487245 SEM1Q6ZVN7 128 aa21.85■■□□□ 1.09
HLA-C-208ENST00000487245 TAF15Q92804 592 aaKnown RBP eCLIP21.85■■□□□ 1.09
HLA-C-208ENST00000487245 MSL2Q9HCI7 577 aa21.85■■□□□ 1.09
HLA-C-208ENST00000487245 TMEM242Q9NWH2 141 aa21.85■■□□□ 1.09
HLA-C-208ENST00000487245 CATR1Q13166 79 aa21.84■■□□□ 1.09
HLA-C-208ENST00000487245 SPANXN5Q5MJ07 72 aa21.84■■□□□ 1.09
HLA-C-208ENST00000487245 MRGPRGQ86SM5 289 aa21.84■■□□□ 1.09
HLA-C-208ENST00000487245 COQ2Q96H96 371 aa21.84■■□□□ 1.09
HLA-C-208ENST00000487245 UFSP2Q9NUQ7 469 aa21.84■■□□□ 1.09
HLA-C-208ENST00000487245 FZR1Q9UM11 496 aa21.84■■□□□ 1.09
HLA-C-208ENST00000487245 NQO2P16083 231 aa21.83■■□□□ 1.09
HLA-C-208ENST00000487245 COL10A1Q03692 680 aa21.83■■□□□ 1.09
HLA-C-208ENST00000487245 Q6ZS92 163 aa21.83■■□□□ 1.09
HLA-C-208ENST00000487245 Q8WTZ3 238 aa21.83■■□□□ 1.09
HLA-C-208ENST00000487245 CA5BP1Q8WTZ4 195 aa21.83■■□□□ 1.09
HLA-C-208ENST00000487245 C5orf30Q96GV9 206 aa21.83■■□□□ 1.09
HLA-C-208ENST00000487245 ZNF665Q9H7R5 613 aa21.83■■□□□ 1.09
HLA-C-208ENST00000487245 NDUFS6O75380 124 aaKnown RBP21.83■■□□□ 1.08
HLA-C-208ENST00000487245 IFNA1P01562 189 aa21.83■■□□□ 1.08
HLA-C-208ENST00000487245 GABRA2P47869 451 aa21.83■■□□□ 1.08
HLA-C-208ENST00000487245 TIMM23BQ5SRD1 257 aa21.83■■□□□ 1.08
HLA-C-208ENST00000487245 FAM90A1Q86YD7 464 aa21.83■■□□□ 1.08
HLA-C-208ENST00000487245 MRPL37Q9BZE1 423 aaKnown RBP21.83■■□□□ 1.08
HLA-C-208ENST00000487245 OR2D2Q9H210 308 aa21.83■■□□□ 1.08
HLA-C-208ENST00000487245 VAX2Q9UIW0 290 aa21.83■■□□□ 1.08
HLA-C-208ENST00000487245 PTBP3O95758 552 aaKnown RBP21.82■■□□□ 1.08
HLA-C-208ENST00000487245 RPS10P46783 165 aaKnown RBP21.82■■□□□ 1.08
HLA-C-208ENST00000487245 LCN15Q6UWW0 184 aa21.82■■□□□ 1.08
HLA-C-208ENST00000487245 SSX7Q7RTT5 188 aa21.82■■□□□ 1.08
HLA-C-208ENST00000487245 NANPQ8TBE9 248 aa21.82■■□□□ 1.08
HLA-C-208ENST00000487245 CTNNBIP1Q9NSA3 81 aaPredicted RBP21.82■■□□□ 1.08
HLA-C-208ENST00000487245 RPL30P62888 115 aaKnown RBP21.81■■□□□ 1.08
HLA-C-208ENST00000487245 OR52L2PQ8NGH6 319 aa21.81■■□□□ 1.08
HLA-C-208ENST00000487245 LRRC29Q8WV35 223 aa21.81■■□□□ 1.08
HLA-C-208ENST00000487245 LRRC30A6NM36 301 aa21.81■■□□□ 1.08
HLA-C-208ENST00000487245 RAB29O14966 203 aa21.81■■□□□ 1.08
HLA-C-208ENST00000487245 CRYABP02511 175 aaKnown RBP21.81■■□□□ 1.08
HLA-C-208ENST00000487245 RND2P52198 227 aa21.81■■□□□ 1.08
HLA-C-208ENST00000487245 RAB11AP62491 216 aa21.81■■□□□ 1.08
HLA-C-208ENST00000487245 OR13D1Q8NGV5 346 aa21.81■■□□□ 1.08
HLA-C-208ENST00000487245 ZNF318Q5VUA4 2279 aa21.81■■□□□ 1.08
HLA-C-208ENST00000487245 MAP1LC3B2A6NCE7 125 aa21.8■■□□□ 1.08
HLA-C-208ENST00000487245 CXCL1P09341 107 aa21.8■■□□□ 1.08
HLA-C-208ENST00000487245 HOXA5P20719 270 aa21.8■■□□□ 1.08
HLA-C-208ENST00000487245 CFHR2P36980 270 aa21.8■■□□□ 1.08
HLA-C-208ENST00000487245 KIAA0141Q14154 515 aaPredicted RBP21.8■■□□□ 1.08
HLA-C-208ENST00000487245 C1orf185Q5T7R7 199 aa21.8■■□□□ 1.08
HLA-C-208ENST00000487245 MRGPRDQ8TDS7 321 aa21.8■■□□□ 1.08
HLA-C-208ENST00000487245 MAP1LC3BQ9GZQ8 125 aa21.8■■□□□ 1.08
HLA-C-208ENST00000487245 TMPRSS5Q9H3S3 457 aa21.8■■□□□ 1.08
HLA-C-208ENST00000487245 LAMP3Q9UQV4 416 aa21.8■■□□□ 1.08
HLA-C-208ENST00000487245 URB1O60287 2271 aaKnown RBP21.8■■□□□ 1.08
HLA-C-208ENST00000487245 ZFP92A6NM28 416 aa21.79■■□□□ 1.08
HLA-C-208ENST00000487245 RAMP3O60896 148 aa21.79■■□□□ 1.08
HLA-C-208ENST00000487245 CLDN14O95500 239 aa21.79■■□□□ 1.08
HLA-C-208ENST00000487245 CLDN1O95832 211 aa21.79■■□□□ 1.08
HLA-C-208ENST00000487245 ERVFRD-1P60508 538 aa21.79■■□□□ 1.08
HLA-C-208ENST00000487245 ZNF66Q6ZN08 573 aa21.79■■□□□ 1.08
HLA-C-208ENST00000487245 SLC16A13Q7RTY0 426 aa21.79■■□□□ 1.08
HLA-C-208ENST00000487245 OR2Z1Q8NG97 314 aa21.79■■□□□ 1.08
HLA-C-208ENST00000487245 FAM216AQ8WUB2 273 aa21.79■■□□□ 1.08
HLA-C-208ENST00000487245 TMEM147Q9BVK8 224 aa21.79■■□□□ 1.08
HLA-C-208ENST00000487245 ODAMA1E959 279 aa21.79■■□□□ 1.08
HLA-C-208ENST00000487245 SPINT2O43291 252 aa21.79■■□□□ 1.08
HLA-C-208ENST00000487245 TGOLN2O43493 480 aa21.79■■□□□ 1.08
HLA-C-208ENST00000487245 CLN5O75503 358 aa21.79■■□□□ 1.08
HLA-C-208ENST00000487245 ADH4P08319 380 aa21.79■■□□□ 1.08
HLA-C-208ENST00000487245 PRDX2P32119 198 aa21.79■■□□□ 1.08
HLA-C-208ENST00000487245 TIMP3P35625 211 aa21.79■■□□□ 1.08
HLA-C-208ENST00000487245 HTD2P86397 168 aa21.79■■□□□ 1.08
HLA-C-208ENST00000487245 PPP1R35Q8TAP8 253 aa21.79■■□□□ 1.08
HLA-C-208ENST00000487245 SDF2L1Q9HCN8 221 aa21.79■■□□□ 1.08
HLA-C-208ENST00000487245 UBE2L5PA0A1B0GUS4 154 aa21.78■■□□□ 1.08
HLA-C-208ENST00000487245 PMS2P5A8MQ11 134 aa21.78■■□□□ 1.08
HLA-C-208ENST00000487245 CYB5R3P00387 301 aaPredicted RBP21.78■■□□□ 1.08
HLA-C-208ENST00000487245 BRWD1-AS2P59051 145 aa21.78■■□□□ 1.08
HLA-C-208ENST00000487245 TCF15Q12870 199 aa21.78■■□□□ 1.08
HLA-C-208ENST00000487245 ZNF343Q6P1L6 599 aa21.78■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms