RNA–Protein interactions for RNA: ENST00000486868.1

PRKCB-207, Transcript of protein kinase C beta, humanhuman

TSL 3

Gene PRKCB, Length 467 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-207ENST00000486868 THBS3P49746 956 aa9.59□□□□□ -0.87
PRKCB-207ENST00000486868 TMEM33P57088 247 aa9.59□□□□□ -0.87
PRKCB-207ENST00000486868 RPL30P62888 115 aaKnown RBP9.59□□□□□ -0.87
PRKCB-207ENST00000486868 TAGLNQ01995 201 aaKnown RBP9.59□□□□□ -0.87
PRKCB-207ENST00000486868 CT45A1Q5HYN5 189 aa9.59□□□□□ -0.87
PRKCB-207ENST00000486868 TMEM200BQ69YZ2 307 aa9.59□□□□□ -0.87
PRKCB-207ENST00000486868 EIF5AL1Q6IS14 154 aaKnown RBP9.59□□□□□ -0.87
PRKCB-207ENST00000486868 SPAG16Q8N0X2 631 aa9.59□□□□□ -0.87
PRKCB-207ENST00000486868 FGFRL1Q8N441 504 aa9.59□□□□□ -0.87
PRKCB-207ENST00000486868 CT45A3Q8NHU0 189 aa9.59□□□□□ -0.87
PRKCB-207ENST00000486868 C8orf46Q8TAG6 207 aa9.59□□□□□ -0.87
PRKCB-207ENST00000486868 TCTEX1D2Q8WW35 142 aa9.59□□□□□ -0.87
PRKCB-207ENST00000486868 RAB1CQ92928 201 aa9.59□□□□□ -0.87
PRKCB-207ENST00000486868 TIMD4Q96H15 378 aa9.59□□□□□ -0.87
PRKCB-207ENST00000486868 ZNF471Q9BX82 626 aaPredicted RBP9.59□□□□□ -0.87
PRKCB-207ENST00000486868 SLC25A31Q9H0C2 315 aa9.59□□□□□ -0.87
PRKCB-207ENST00000486868 CYTL1Q9NRR1 136 aa9.59□□□□□ -0.87
PRKCB-207ENST00000486868 RCL1Q9Y2P8 373 aaKnown RBP9.59□□□□□ -0.87
PRKCB-207ENST00000486868 PRELID3BQ9Y3B1 194 aa9.59□□□□□ -0.87
PRKCB-207ENST00000486868 KLF2Q9Y5W3 355 aaPredicted RBP9.59□□□□□ -0.87
PRKCB-207ENST00000486868 AUP1Q9Y679 476 aa9.59□□□□□ -0.87
PRKCB-207ENST00000486868 DYSFO75923 2080 aa9.59□□□□□ -0.87
PRKCB-207ENST00000486868 TPRP12270 2363 aaKnown RBP9.58□□□□□ -0.88
PRKCB-207ENST00000486868 PKD1L2Q7Z442 2459 aa9.58□□□□□ -0.88
PRKCB-207ENST00000486868 A0A1W2PPH5 198 aa9.58□□□□□ -0.88
PRKCB-207ENST00000486868 MSGN1A6NI15 193 aa9.58□□□□□ -0.88
PRKCB-207ENST00000486868 DVL1O14640 695 aa9.58□□□□□ -0.88
PRKCB-207ENST00000486868 PROP1O75360 226 aa9.58□□□□□ -0.88
PRKCB-207ENST00000486868 JTBO76095 146 aa9.58□□□□□ -0.88
PRKCB-207ENST00000486868 HPRT1P00492 218 aa9.58□□□□□ -0.88
PRKCB-207ENST00000486868 IGKV1-5P01602 117 aa9.58□□□□□ -0.88
PRKCB-207ENST00000486868 COL8A2P25067 703 aa9.58□□□□□ -0.88
PRKCB-207ENST00000486868 ZNF134P52741 427 aa9.58□□□□□ -0.88
PRKCB-207ENST00000486868 AKR1C2P52895 323 aa9.58□□□□□ -0.88
PRKCB-207ENST00000486868 DLX6P56179 175 aa9.58□□□□□ -0.88
PRKCB-207ENST00000486868 BRWD1-AS2P59051 145 aa9.58□□□□□ -0.88
PRKCB-207ENST00000486868 BAXQ07812 192 aa9.58□□□□□ -0.88
PRKCB-207ENST00000486868 AARDQ4LEZ3 155 aa9.58□□□□□ -0.88
PRKCB-207ENST00000486868 LYPD2Q6UXB3 125 aa9.58□□□□□ -0.88
PRKCB-207ENST00000486868 BAP18Q8IXM2 172 aa9.58□□□□□ -0.88
PRKCB-207ENST00000486868 OR8H3Q8N146 312 aa9.58□□□□□ -0.88
PRKCB-207ENST00000486868 OR2C3Q8N628 320 aa9.58□□□□□ -0.88
PRKCB-207ENST00000486868 RNASE11Q8TAA1 199 aaKnown RBP9.58□□□□□ -0.88
PRKCB-207ENST00000486868 DDB2Q92466 427 aa9.58□□□□□ -0.88
PRKCB-207ENST00000486868 TNFRSF14Q92956 283 aa9.58□□□□□ -0.88
PRKCB-207ENST00000486868 GPHA2Q96T91 129 aa9.58□□□□□ -0.88
PRKCB-207ENST00000486868 C19orf12Q9NSK7 152 aa9.58□□□□□ -0.88
PRKCB-207ENST00000486868 CTSZQ9UBR2 303 aa9.58□□□□□ -0.88
PRKCB-207ENST00000486868 RALYQ9UKM9 306 aaKnown RBP9.58□□□□□ -0.88
PRKCB-207ENST00000486868 WSB1Q9Y6I7 421 aa9.58□□□□□ -0.88
PRKCB-207ENST00000486868 ICE1Q9Y2F5 2266 aa9.57□□□□□ -0.88
PRKCB-207ENST00000486868 A0A0G2JRQ6 117 aa9.57□□□□□ -0.88
PRKCB-207ENST00000486868 A6NNC1 897 aa9.57□□□□□ -0.88
PRKCB-207ENST00000486868 C17orf98A8MV24 154 aa9.57□□□□□ -0.88
PRKCB-207ENST00000486868 WRBO00258 174 aa9.57□□□□□ -0.88
PRKCB-207ENST00000486868 MED6O75586 246 aa9.57□□□□□ -0.88
PRKCB-207ENST00000486868 FCN3O75636 299 aa9.57□□□□□ -0.88
PRKCB-207ENST00000486868 SCGB1D2O95969 90 aa9.57□□□□□ -0.88
PRKCB-207ENST00000486868 SOD3P08294 240 aa9.57□□□□□ -0.88
PRKCB-207ENST00000486868 ZNF16P17020 682 aaPredicted RBP9.57□□□□□ -0.88
PRKCB-207ENST00000486868 VAMP2P63027 116 aa9.57□□□□□ -0.88
PRKCB-207ENST00000486868 ZNF273Q14593 569 aa9.57□□□□□ -0.88
PRKCB-207ENST00000486868 CXorf66Q5JRM2 361 aaPredicted RBP9.57□□□□□ -0.88
PRKCB-207ENST00000486868 ZNF841Q6ZN19 808 aa9.57□□□□□ -0.88
PRKCB-207ENST00000486868 UBAC2Q8NBM4 344 aa9.57□□□□□ -0.88
PRKCB-207ENST00000486868 FAM210AQ96ND0 272 aa9.57□□□□□ -0.88
PRKCB-207ENST00000486868 S1PR3Q99500 378 aa9.57□□□□□ -0.88
PRKCB-207ENST00000486868 SPOCK3Q9BQ16 436 aa9.57□□□□□ -0.88
PRKCB-207ENST00000486868 ZNF251Q9BRH9 671 aa9.57□□□□□ -0.88
PRKCB-207ENST00000486868 ARV1Q9H2C2 271 aa9.57□□□□□ -0.88
PRKCB-207ENST00000486868 CHODLQ9H9P2 273 aa9.57□□□□□ -0.88
PRKCB-207ENST00000486868 CTNNBIP1Q9NSA3 81 aaPredicted RBP9.57□□□□□ -0.88
PRKCB-207ENST00000486868 LYRM2Q9NU23 88 aaPredicted RBP9.57□□□□□ -0.88
PRKCB-207ENST00000486868 ARFGEF3Q5TH69 2177 aa9.57□□□□□ -0.88
PRKCB-207ENST00000486868 DSCAMO60469 2012 aa9.56□□□□□ -0.88
PRKCB-207ENST00000486868 DSPP15924 2871 aaKnown RBP9.56□□□□□ -0.88
PRKCB-207ENST00000486868 COL6A6A6NMZ7 2263 aa9.56□□□□□ -0.88
PRKCB-207ENST00000486868 CACNA1DQ01668 2161 aa9.56□□□□□ -0.88
PRKCB-207ENST00000486868 TANC2Q9HCD6 1990 aa9.56□□□□□ -0.88
PRKCB-207ENST00000486868 LINC00473A8K010 186 aa9.56□□□□□ -0.88
PRKCB-207ENST00000486868 M0R1X1 148 aa9.56□□□□□ -0.88
PRKCB-207ENST00000486868 SCAF4O95104 1147 aaKnown RBP9.56□□□□□ -0.88
PRKCB-207ENST00000486868 RRASP10301 218 aa9.56□□□□□ -0.88
PRKCB-207ENST00000486868 ZNF137PP52743 207 aa9.56□□□□□ -0.88
PRKCB-207ENST00000486868 POLR2GP62487 172 aaKnown RBP eCLIP9.56□□□□□ -0.88
PRKCB-207ENST00000486868 RPL23AP62750 156 aaKnown RBP9.56□□□□□ -0.88
PRKCB-207ENST00000486868 POU2AF1Q16633 256 aa9.56□□□□□ -0.88
PRKCB-207ENST00000486868 LTC4SQ16873 150 aa9.56□□□□□ -0.88
PRKCB-207ENST00000486868 MIDNQ504T8 468 aa9.56□□□□□ -0.88
PRKCB-207ENST00000486868 NCR3LG1Q68D85 454 aa9.56□□□□□ -0.88
PRKCB-207ENST00000486868 DHRS7BQ6IAN0 325 aaPredicted RBP9.56□□□□□ -0.88
PRKCB-207ENST00000486868 FAM53AQ6NSI3 398 aaPredicted RBP9.56□□□□□ -0.88
PRKCB-207ENST00000486868 Q6ZRM9 215 aa9.56□□□□□ -0.88
PRKCB-207ENST00000486868 FOXRED2Q8IWF2 684 aa9.56□□□□□ -0.88
PRKCB-207ENST00000486868 ODF3L1Q8IXM7 274 aa9.56□□□□□ -0.88
PRKCB-207ENST00000486868 SLC7A5P1Q8MH63 180 aa9.56□□□□□ -0.88
PRKCB-207ENST00000486868 OR8B3Q8NGG8 313 aa9.56□□□□□ -0.88
PRKCB-207ENST00000486868 OR4S2Q8NH73 311 aa9.56□□□□□ -0.88
PRKCB-207ENST00000486868 NEIL1Q96FI4 390 aaPredicted RBP9.56□□□□□ -0.88
PRKCB-207ENST00000486868 SMIM8Q96KF7 97 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms