RNA–Protein interactions for RNA: ENST00000486704.1

HDAC8-218, Transcript of histone deacetylase 8, humanhuman

TSL 2

Gene HDAC8, Length 330 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-218ENST00000486704 WASHC3Q9Y3C0 194 aa12.56□□□□□ -0.4
HDAC8-218ENST00000486704 BET1O15155 118 aa12.55□□□□□ -0.4
HDAC8-218ENST00000486704 PROP1O75360 226 aa12.55□□□□□ -0.4
HDAC8-218ENST00000486704 GSTT2P0CG29 244 aa12.55□□□□□ -0.4
HDAC8-218ENST00000486704 GSTT2BP0CG30 244 aa12.55□□□□□ -0.4
HDAC8-218ENST00000486704 CNTFRP26992 372 aa12.55□□□□□ -0.4
HDAC8-218ENST00000486704 RPL23AP62750 156 aaKnown RBP12.55□□□□□ -0.4
HDAC8-218ENST00000486704 PITPNAQ00169 270 aa12.55□□□□□ -0.4
HDAC8-218ENST00000486704 CFHR3Q02985 330 aa12.55□□□□□ -0.4
HDAC8-218ENST00000486704 PNLIPRP3Q17RR3 467 aa12.55□□□□□ -0.4
HDAC8-218ENST00000486704 C5orf64Q2M2E5 130 aa12.55□□□□□ -0.4
HDAC8-218ENST00000486704 CDNFQ49AH0 187 aa12.55□□□□□ -0.4
HDAC8-218ENST00000486704 KHDC1LQ5JSQ8 128 aa12.55□□□□□ -0.4
HDAC8-218ENST00000486704 KPRPQ5T749 579 aaPredicted RBP12.55□□□□□ -0.4
HDAC8-218ENST00000486704 RNF152Q8N8N0 203 aa12.55□□□□□ -0.4
HDAC8-218ENST00000486704 MAFIPQ8WZ33 124 aa12.55□□□□□ -0.4
HDAC8-218ENST00000486704 SLC25A38Q96DW6 304 aa12.55□□□□□ -0.4
HDAC8-218ENST00000486704 RITA1Q96K30 269 aa12.55□□□□□ -0.4
HDAC8-218ENST00000486704 RNF5Q99942 180 aa12.55□□□□□ -0.4
HDAC8-218ENST00000486704 DCSTAMPQ9H295 470 aa12.55□□□□□ -0.4
HDAC8-218ENST00000486704 ZFP57Q9NU63 452 aa12.55□□□□□ -0.4
HDAC8-218ENST00000486704 KIAA1456Q9P272 454 aa12.55□□□□□ -0.4
HDAC8-218ENST00000486704 ZNF230Q9UIE0 474 aaPredicted RBP12.55□□□□□ -0.4
HDAC8-218ENST00000486704 GAB2Q9UQC2 676 aa12.55□□□□□ -0.4
HDAC8-218ENST00000486704 A0A0A6YYH2 397 aa12.54□□□□□ -0.4
HDAC8-218ENST00000486704 A6NJ64 397 aa12.54□□□□□ -0.4
HDAC8-218ENST00000486704 AIREO43918 545 aa12.54□□□□□ -0.4
HDAC8-218ENST00000486704 OR5H8P0DN80 308 aa12.54□□□□□ -0.4
HDAC8-218ENST00000486704 FOXE3Q13461 319 aa12.54□□□□□ -0.4
HDAC8-218ENST00000486704 BEAN1Q3B7T3 259 aa12.54□□□□□ -0.4
HDAC8-218ENST00000486704 ZNF260Q3ZCT1 412 aa12.54□□□□□ -0.4
HDAC8-218ENST00000486704 IDNKQ5T6J7 187 aa12.54□□□□□ -0.4
HDAC8-218ENST00000486704 TEX38Q6PEX7 206 aa12.54□□□□□ -0.4
HDAC8-218ENST00000486704 CROCCP3Q8IVE0 287 aa12.54□□□□□ -0.4
HDAC8-218ENST00000486704 WFDC9Q8NEX5 89 aa12.54□□□□□ -0.4
HDAC8-218ENST00000486704 ELF5Q9UKW6 265 aaPredicted RBP12.54□□□□□ -0.4
HDAC8-218ENST00000486704 IGKV1D-8A0A087WSZ0 117 aa12.53□□□□□ -0.4
HDAC8-218ENST00000486704 TMEM235A6NFC5 223 aa12.53□□□□□ -0.4
HDAC8-218ENST00000486704 G3V4G9 280 aa12.53□□□□□ -0.4
HDAC8-218ENST00000486704 SPDEFO95238 335 aa12.53□□□□□ -0.4
HDAC8-218ENST00000486704 IGHG4P01861 327 aa12.53□□□□□ -0.4
HDAC8-218ENST00000486704 PF4P02776 101 aa12.53□□□□□ -0.4
HDAC8-218ENST00000486704 TFAP2AP05549 437 aa12.53□□□□□ -0.4
HDAC8-218ENST00000486704 ELANEP08246 267 aa12.53□□□□□ -0.4
HDAC8-218ENST00000486704 VDAC1P21796 283 aa12.53□□□□□ -0.4
HDAC8-218ENST00000486704 PDLIM3Q53GG5 364 aaPredicted RBP12.53□□□□□ -0.4
HDAC8-218ENST00000486704 GLDNQ6ZMI3 551 aaPredicted RBP12.53□□□□□ -0.4
HDAC8-218ENST00000486704 PDPNQ86YL7 162 aa12.53□□□□□ -0.4
HDAC8-218ENST00000486704 H1FOOQ8IZA3 346 aaPredicted RBP12.53□□□□□ -0.4
HDAC8-218ENST00000486704 OR5H6Q8NGV6 325 aa12.53□□□□□ -0.4
HDAC8-218ENST00000486704 OR2D2Q9H210 308 aa12.53□□□□□ -0.4
HDAC8-218ENST00000486704 RNF150Q9ULK6 438 aa12.53□□□□□ -0.4
HDAC8-218ENST00000486704 SPATA2Q9UM82 520 aa12.53□□□□□ -0.4
HDAC8-218ENST00000486704 NOTCH3Q9UM47 2321 aa12.53□□□□□ -0.4
HDAC8-218ENST00000486704 IGHV7-81A0A0B4J1V7 117 aa12.52□□□□□ -0.41
HDAC8-218ENST00000486704 H7C2Y5 167 aa12.52□□□□□ -0.41
HDAC8-218ENST00000486704 RRHO14718 337 aa12.52□□□□□ -0.41
HDAC8-218ENST00000486704 APOA2P02652 100 aa12.52□□□□□ -0.41
HDAC8-218ENST00000486704 CRIP2P52943 208 aaPredicted RBP12.52□□□□□ -0.41
HDAC8-218ENST00000486704 GNG2P59768 71 aa12.52□□□□□ -0.41
HDAC8-218ENST00000486704 ETV3LQ6ZN32 361 aa12.52□□□□□ -0.41
HDAC8-218ENST00000486704 C1QL4Q86Z23 238 aa12.52□□□□□ -0.41
HDAC8-218ENST00000486704 ZNF383Q8NA42 475 aa12.52□□□□□ -0.41
HDAC8-218ENST00000486704 NUDCD2Q8WVJ2 157 aa12.52□□□□□ -0.41
HDAC8-218ENST00000486704 GINS4Q9BRT9 223 aa12.52□□□□□ -0.41
HDAC8-218ENST00000486704 OR51J1Q9H342 316 aa12.52□□□□□ -0.41
HDAC8-218ENST00000486704 M0R1X1 148 aa12.51□□□□□ -0.41
HDAC8-218ENST00000486704 ATP6V0E1O15342 81 aa12.51□□□□□ -0.41
HDAC8-218ENST00000486704 SSX5O60225 188 aa12.51□□□□□ -0.41
HDAC8-218ENST00000486704 CTXN2P0C2S0 81 aa12.51□□□□□ -0.41
HDAC8-218ENST00000486704 OR8U9P0C7N5 309 aa12.51□□□□□ -0.41
HDAC8-218ENST00000486704 CD33P20138 364 aa12.51□□□□□ -0.41
HDAC8-218ENST00000486704 TGFBR1P36897 503 aa12.51□□□□□ -0.41
HDAC8-218ENST00000486704 CXorf66Q5JRM2 361 aaPredicted RBP12.51□□□□□ -0.41
HDAC8-218ENST00000486704 LIN54Q6MZP7 749 aa12.51□□□□□ -0.41
HDAC8-218ENST00000486704 DRAXINQ8NBI3 349 aaPredicted RBP12.51□□□□□ -0.41
HDAC8-218ENST00000486704 OR8U1Q8NH10 309 aa12.51□□□□□ -0.41
HDAC8-218ENST00000486704 SDHAF2Q9NX18 166 aa12.51□□□□□ -0.41
HDAC8-218ENST00000486704 IGKV1-16P04430 117 aa12.5□□□□□ -0.41
HDAC8-218ENST00000486704 PSMB8P28062 276 aa12.5□□□□□ -0.41
HDAC8-218ENST00000486704 TAGLNQ01995 201 aaKnown RBP12.5□□□□□ -0.41
HDAC8-218ENST00000486704 ZNF660Q6AZW8 331 aaPredicted RBP12.5□□□□□ -0.41
HDAC8-218ENST00000486704 CNIH2Q6PI25 160 aa12.5□□□□□ -0.41
HDAC8-218ENST00000486704 ZNF695Q8IW36 515 aa12.5□□□□□ -0.41
HDAC8-218ENST00000486704 LINC00482Q8N8I6 264 aa12.5□□□□□ -0.41
HDAC8-218ENST00000486704 KLHL30-AS1Q8NEE0 82 aa12.5□□□□□ -0.41
HDAC8-218ENST00000486704 MYOZ3Q8TDC0 251 aa12.5□□□□□ -0.41
HDAC8-218ENST00000486704 C5orf30Q96GV9 206 aa12.5□□□□□ -0.41
HDAC8-218ENST00000486704 TSNAXQ99598 290 aaKnown RBP12.5□□□□□ -0.41
HDAC8-218ENST00000486704 ST6GALNAC5Q9BVH7 336 aa12.5□□□□□ -0.41
HDAC8-218ENST00000486704 FBXL15Q9H469 300 aa12.5□□□□□ -0.41
HDAC8-218ENST00000486704 NUDT19A8MXV4 375 aa12.49□□□□□ -0.41
HDAC8-218ENST00000486704 RPLP1P05386 114 aaKnown RBP12.49□□□□□ -0.41
HDAC8-218ENST00000486704 PPIFP30405 207 aaKnown RBP12.49□□□□□ -0.41
HDAC8-218ENST00000486704 RPS19P39019 145 aaKnown RBP12.49□□□□□ -0.41
HDAC8-218ENST00000486704 CDX1P47902 265 aaPredicted RBP12.49□□□□□ -0.41
HDAC8-218ENST00000486704 THBS3P49746 956 aa12.49□□□□□ -0.41
HDAC8-218ENST00000486704 NDPQ00604 133 aa12.49□□□□□ -0.41
HDAC8-218ENST00000486704 PSG5Q15238 335 aa12.49□□□□□ -0.41
HDAC8-218ENST00000486704 C19orf54Q5BKX5 351 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 73.6 ms