RNA–Protein interactions for RNA: ENST00000486515.1

UBR4-214, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 3

Gene UBR4, Length 536 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-214ENST00000486515 UCP3P55916 312 aa5.68□□□□□ -1.5
UBR4-214ENST00000486515 DLX6P56179 175 aa5.68□□□□□ -1.5
UBR4-214ENST00000486515 RAB25P57735 213 aa5.68□□□□□ -1.5
UBR4-214ENST00000486515 LOXL3P58215 753 aa5.68□□□□□ -1.5
UBR4-214ENST00000486515 TAGLNQ01995 201 aaKnown RBP5.68□□□□□ -1.5
UBR4-214ENST00000486515 GNMTQ14749 295 aa5.68□□□□□ -1.5
UBR4-214ENST00000486515 HERPUD1Q15011 391 aa5.68□□□□□ -1.5
UBR4-214ENST00000486515 HLA-DRB5Q30154 266 aa5.68□□□□□ -1.5
UBR4-214ENST00000486515 MINOS1Q5TGZ0 78 aa5.68□□□□□ -1.5
UBR4-214ENST00000486515 AADACL3Q5VUY0 350 aa5.68□□□□□ -1.5
UBR4-214ENST00000486515 THOC7Q6I9Y2 204 aaKnown RBP5.68□□□□□ -1.5
UBR4-214ENST00000486515 CCBE1Q6UXH8 406 aaPredicted RBP5.68□□□□□ -1.5
UBR4-214ENST00000486515 ZNF66Q6ZN08 573 aa5.68□□□□□ -1.5
UBR4-214ENST00000486515 SLC25A48Q6ZT89 311 aaKnown RBP5.68□□□□□ -1.5
UBR4-214ENST00000486515 TCF23Q7RTU1 214 aa5.68□□□□□ -1.5
UBR4-214ENST00000486515 MOB3BQ86TA1 216 aa5.68□□□□□ -1.5
UBR4-214ENST00000486515 KRTAP1-3Q8IUG1 177 aa5.68□□□□□ -1.5
UBR4-214ENST00000486515 LINC00311Q8N616 119 aa5.68□□□□□ -1.5
UBR4-214ENST00000486515 ZDHHC22Q8N966 263 aa5.68□□□□□ -1.5
UBR4-214ENST00000486515 ZBTB8BQ8NAP8 495 aaPredicted RBP5.68□□□□□ -1.5
UBR4-214ENST00000486515 OR11H6Q8NGC7 330 aa5.68□□□□□ -1.5
UBR4-214ENST00000486515 OR4D10Q8NGI6 311 aa5.68□□□□□ -1.5
UBR4-214ENST00000486515 MARCH1Q8TCQ1 289 aa5.68□□□□□ -1.5
UBR4-214ENST00000486515 CD300LFQ8TDQ1 290 aa5.68□□□□□ -1.5
UBR4-214ENST00000486515 TCTEX1D2Q8WW35 142 aa5.68□□□□□ -1.5
UBR4-214ENST00000486515 UPRTQ96BW1 309 aa5.68□□□□□ -1.5
UBR4-214ENST00000486515 MALSU1Q96EH3 234 aa5.68□□□□□ -1.5
UBR4-214ENST00000486515 CYYR1Q96J86 154 aa5.68□□□□□ -1.5
UBR4-214ENST00000486515 HSD17B10Q99714 261 aaKnown RBP5.68□□□□□ -1.5
UBR4-214ENST00000486515 AIFM2Q9BRQ8 373 aa5.68□□□□□ -1.5
UBR4-214ENST00000486515 BEX2Q9BXY8 128 aa5.68□□□□□ -1.5
UBR4-214ENST00000486515 TOLLIPQ9H0E2 274 aa5.68□□□□□ -1.5
UBR4-214ENST00000486515 C11orf54Q9H0W9 315 aaPredicted RBP5.68□□□□□ -1.5
UBR4-214ENST00000486515 UNKLQ9H9P5 680 aaKnown RBP5.68□□□□□ -1.5
UBR4-214ENST00000486515 LIN7CQ9NUP9 197 aaKnown RBP5.68□□□□□ -1.5
UBR4-214ENST00000486515 NUP50Q9UKX7 468 aa5.68□□□□□ -1.5
UBR4-214ENST00000486515 TBL2Q9Y4P3 447 aaKnown RBP5.68□□□□□ -1.5
UBR4-214ENST00000486515 MINOS1-NBL1R4GNA1 71 aa5.68□□□□□ -1.5
UBR4-214ENST00000486515 A0A096LNT2 108 aa5.67□□□□□ -1.5
UBR4-214ENST00000486515 IGHV1-69DA0A0B4J2H0 117 aa5.67□□□□□ -1.5
UBR4-214ENST00000486515 IGKV1-6A0A0C4DH72 117 aa5.67□□□□□ -1.5
UBR4-214ENST00000486515 A0A1W2PPE3 182 aa5.67□□□□□ -1.5
UBR4-214ENST00000486515 OR5H14A6NHG9 310 aa5.67□□□□□ -1.5
UBR4-214ENST00000486515 BUB1B-PAK6H3BSN5 160 aa5.67□□□□□ -1.5
UBR4-214ENST00000486515 H7C2Y5 167 aa5.67□□□□□ -1.5
UBR4-214ENST00000486515 M0R1X1 148 aa5.67□□□□□ -1.5
UBR4-214ENST00000486515 NPFFO15130 113 aa5.67□□□□□ -1.5
UBR4-214ENST00000486515 PLA2G10O15496 165 aa5.67□□□□□ -1.5
UBR4-214ENST00000486515 PRAF2O60831 178 aa5.67□□□□□ -1.5
UBR4-214ENST00000486515 FCN3O75636 299 aa5.67□□□□□ -1.5
UBR4-214ENST00000486515 MMP23AO75900 390 aa5.67□□□□□ -1.5
UBR4-214ENST00000486515 NDUFB6O95139 128 aa5.67□□□□□ -1.5
UBR4-214ENST00000486515 IGHV1-69P01742 117 aa5.67□□□□□ -1.5
UBR4-214ENST00000486515 CTSDP07339 412 aaPredicted RBP5.67□□□□□ -1.5
UBR4-214ENST00000486515 H2AFB2P0C5Z0 115 aa5.67□□□□□ -1.5
UBR4-214ENST00000486515 VAMP1P23763 118 aa5.67□□□□□ -1.5
UBR4-214ENST00000486515 CD34P28906 385 aa5.67□□□□□ -1.5
UBR4-214ENST00000486515 SLC6A1P30531 599 aa5.67□□□□□ -1.5
UBR4-214ENST00000486515 MC5RP33032 325 aa5.67□□□□□ -1.5
UBR4-214ENST00000486515 KIR2DS2P43631 304 aa5.67□□□□□ -1.5
UBR4-214ENST00000486515 CCR6P51684 374 aa5.67□□□□□ -1.5
UBR4-214ENST00000486515 PIGPP57054 158 aa5.67□□□□□ -1.5
UBR4-214ENST00000486515 ERVK-16P61578 105 aa5.67□□□□□ -1.5
UBR4-214ENST00000486515 SRPXP78539 464 aa5.67□□□□□ -1.5
UBR4-214ENST00000486515 PAX2Q02962 417 aa5.67□□□□□ -1.5
UBR4-214ENST00000486515 BAMBIQ13145 260 aa5.67□□□□□ -1.5
UBR4-214ENST00000486515 KLRD1Q13241 179 aa5.67□□□□□ -1.5
UBR4-214ENST00000486515 MSMO1Q15800 293 aa5.67□□□□□ -1.5
UBR4-214ENST00000486515 RTL8BQ17RB0 113 aa5.67□□□□□ -1.5
UBR4-214ENST00000486515 PHLDA2Q53GA4 152 aa5.67□□□□□ -1.5
UBR4-214ENST00000486515 CT45A1Q5HYN5 189 aa5.67□□□□□ -1.5
UBR4-214ENST00000486515 ZNF626Q68DY1 528 aa5.67□□□□□ -1.5
UBR4-214ENST00000486515 FAM71F2Q6NXP2 309 aa5.67□□□□□ -1.5
UBR4-214ENST00000486515 KCTD9Q7L273 389 aa5.67□□□□□ -1.5
UBR4-214ENST00000486515 CIARTQ8N365 385 aaPredicted RBP5.67□□□□□ -1.5
UBR4-214ENST00000486515 TCTEX1D1Q8N7M0 179 aa5.67□□□□□ -1.5
UBR4-214ENST00000486515 Q8N7P7 452 aa5.67□□□□□ -1.5
UBR4-214ENST00000486515 OR13C8Q8NGS7 320 aa5.67□□□□□ -1.5
UBR4-214ENST00000486515 SVIPQ8NHG7 77 aa5.67□□□□□ -1.5
UBR4-214ENST00000486515 CT45A3Q8NHU0 189 aa5.67□□□□□ -1.5
UBR4-214ENST00000486515 RNASE11Q8TAA1 199 aaKnown RBP5.67□□□□□ -1.5
UBR4-214ENST00000486515 ABHD14BQ96IU4 210 aa5.67□□□□□ -1.5
UBR4-214ENST00000486515 C20orf85Q9H1P6 137 aa5.67□□□□□ -1.5
UBR4-214ENST00000486515 NUDT15Q9NV35 164 aa5.67□□□□□ -1.5
UBR4-214ENST00000486515 CDC42EP3Q9UKI2 254 aa5.67□□□□□ -1.5
UBR4-214ENST00000486515 GAB2Q9UQC2 676 aa5.67□□□□□ -1.5
UBR4-214ENST00000486515 HILPDAQ9Y5L2 63 aa5.67□□□□□ -1.5
UBR4-214ENST00000486515 SVEP1Q4LDE5 3571 aa5.67□□□□□ -1.5
UBR4-214ENST00000486515 ROS1P08922 2347 aa5.66□□□□□ -1.5
UBR4-214ENST00000486515 TRAV6A0A075B6T7 132 aa5.66□□□□□ -1.5
UBR4-214ENST00000486515 IGHV3OR16-10A0A075B7F0 116 aa5.66□□□□□ -1.5
UBR4-214ENST00000486515 CENPVL3A0A0U1RRI6 287 aa5.66□□□□□ -1.5
UBR4-214ENST00000486515 INMT-MINDY4F8WBC2 141 aa5.66□□□□□ -1.5
UBR4-214ENST00000486515 RNASEK-C17orf49H0YIS7 233 aa5.66□□□□□ -1.5
UBR4-214ENST00000486515 BOLA2-SMG1P6H3BVE0 249 aa5.66□□□□□ -1.5
UBR4-214ENST00000486515 ARPC1BO15143 372 aaKnown RBP5.66□□□□□ -1.5
UBR4-214ENST00000486515 TNFSF12O43508 249 aa5.66□□□□□ -1.5
UBR4-214ENST00000486515 FAM106CPP0CH98 169 aa5.66□□□□□ -1.5
UBR4-214ENST00000486515 MMP9P14780 707 aa5.66□□□□□ -1.5
UBR4-214ENST00000486515 GNRHRP30968 328 aa5.66□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms