RNA–Protein interactions for RNA: ENST00000486184.1

NUP50-216, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 821 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-216ENST00000486184 ZNF79Q15937 498 aa9.18□□□□□ -0.94
NUP50-216ENST00000486184 LY6EQ16553 131 aa9.18□□□□□ -0.94
NUP50-216ENST00000486184 RPL39P5Q59GN2 51 aa9.18□□□□□ -0.94
NUP50-216ENST00000486184 TRIQKQ629K1 86 aa9.18□□□□□ -0.94
NUP50-216ENST00000486184 NIPBLQ6KC79 2804 aaeCLIP9.18□□□□□ -0.94
NUP50-216ENST00000486184 STEAP1BQ6NZ63 245 aa9.18□□□□□ -0.94
NUP50-216ENST00000486184 LINC00299Q6ZSB3 139 aa9.18□□□□□ -0.94
NUP50-216ENST00000486184 ZNF833PQ6ZTB9 187 aa9.18□□□□□ -0.94
NUP50-216ENST00000486184 ODF3L1Q8IXM7 274 aa9.18□□□□□ -0.94
NUP50-216ENST00000486184 TOMM5Q8N4H5 51 aa9.18□□□□□ -0.94
NUP50-216ENST00000486184 DRAM1Q8N682 238 aa9.18□□□□□ -0.94
NUP50-216ENST00000486184 ZNF645Q8N7E2 425 aa9.18□□□□□ -0.94
NUP50-216ENST00000486184 OR56B4Q8NH76 319 aa9.18□□□□□ -0.94
NUP50-216ENST00000486184 SECTM1Q8WVN6 248 aa9.18□□□□□ -0.94
NUP50-216ENST00000486184 GIMAP1Q8WWP7 306 aa9.18□□□□□ -0.94
NUP50-216ENST00000486184 BORCS5Q969J3 196 aa9.18□□□□□ -0.94
NUP50-216ENST00000486184 ST6GALNAC6Q969X2 333 aa9.18□□□□□ -0.94
NUP50-216ENST00000486184 AGMATQ9BSE5 352 aa9.18□□□□□ -0.94
NUP50-216ENST00000486184 RAB18Q9NP72 206 aa9.18□□□□□ -0.94
NUP50-216ENST00000486184 SETD2Q9BYW2 2564 aaPredicted RBP9.17□□□□□ -0.94
NUP50-216ENST00000486184 DISC1C4P0D8 188 aa9.17□□□□□ -0.94
NUP50-216ENST00000486184 CLDN34H7C241 214 aa9.17□□□□□ -0.94
NUP50-216ENST00000486184 M0R1X1 148 aa9.17□□□□□ -0.94
NUP50-216ENST00000486184 TUSC2O75896 110 aa9.17□□□□□ -0.94
NUP50-216ENST00000486184 VENTXO95231 258 aa9.17□□□□□ -0.94
NUP50-216ENST00000486184 AMY2AP04746 511 aa9.17□□□□□ -0.94
NUP50-216ENST00000486184 CRYBA1P05813 215 aa9.17□□□□□ -0.94
NUP50-216ENST00000486184 SNRNP70P08621 437 aaKnown RBP9.17□□□□□ -0.94
NUP50-216ENST00000486184 UBA52P62987 128 aaKnown RBP9.17□□□□□ -0.94
NUP50-216ENST00000486184 CBX3Q13185 183 aa9.17□□□□□ -0.94
NUP50-216ENST00000486184 VAX1Q5SQQ9 334 aa9.17□□□□□ -0.94
NUP50-216ENST00000486184 ZNF57Q68EA5 555 aaPredicted RBP9.17□□□□□ -0.94
NUP50-216ENST00000486184 ARRDC1Q8N5I2 433 aa9.17□□□□□ -0.94
NUP50-216ENST00000486184 ZDHHC22Q8N966 263 aa9.17□□□□□ -0.94
NUP50-216ENST00000486184 GDPD1Q8N9F7 314 aa9.17□□□□□ -0.94
NUP50-216ENST00000486184 AKR1E2Q96JD6 320 aa9.17□□□□□ -0.94
NUP50-216ENST00000486184 MRPL20Q9BYC9 149 aaKnown RBP9.17□□□□□ -0.94
NUP50-216ENST00000486184 CHIAQ9BZP6 476 aa9.17□□□□□ -0.94
NUP50-216ENST00000486184 SRRQ9GZT4 340 aa9.17□□□□□ -0.94
NUP50-216ENST00000486184 SLC5A7Q9GZV3 580 aa9.17□□□□□ -0.94
NUP50-216ENST00000486184 ESM1Q9NQ30 184 aa9.17□□□□□ -0.94
NUP50-216ENST00000486184 TCF19Q9Y242 345 aa9.17□□□□□ -0.94
NUP50-216ENST00000486184 RBMX2Q9Y388 322 aaKnown RBP9.17□□□□□ -0.94
NUP50-216ENST00000486184 IGHV3-72A0A0B4J1Y9 119 aa9.16□□□□□ -0.94
NUP50-216ENST00000486184 ANKRD20A5PA0PJZ0 165 aa9.16□□□□□ -0.94
NUP50-216ENST00000486184 OR5H14A6NHG9 310 aa9.16□□□□□ -0.94
NUP50-216ENST00000486184 H7C2Y5 167 aa9.16□□□□□ -0.94
NUP50-216ENST00000486184 IGKV1D-33P01593 117 aa9.16□□□□□ -0.94
NUP50-216ENST00000486184 IGKV1-33P01594 117 aa9.16□□□□□ -0.94
NUP50-216ENST00000486184 APOA2P02652 100 aa9.16□□□□□ -0.94
NUP50-216ENST00000486184 CD74P04233 296 aa9.16□□□□□ -0.94
NUP50-216ENST00000486184 RNASE1P07998 156 aaKnown RBP9.16□□□□□ -0.94
NUP50-216ENST00000486184 TMEM11P17152 192 aa9.16□□□□□ -0.94
NUP50-216ENST00000486184 CD24P25063 80 aa9.16□□□□□ -0.94
NUP50-216ENST00000486184 CD1BP29016 333 aa9.16□□□□□ -0.94
NUP50-216ENST00000486184 S100GP29377 79 aa9.16□□□□□ -0.94
NUP50-216ENST00000486184 MC5RP33032 325 aa9.16□□□□□ -0.94
NUP50-216ENST00000486184 LSAMPQ13449 338 aa9.16□□□□□ -0.94
NUP50-216ENST00000486184 SCGB2B2Q4G0G5 96 aa9.16□□□□□ -0.94
NUP50-216ENST00000486184 DHRS7BQ6IAN0 325 aaPredicted RBP9.16□□□□□ -0.94
NUP50-216ENST00000486184 LPCAT3Q6P1A2 487 aa9.16□□□□□ -0.94
NUP50-216ENST00000486184 C16orf87Q6PH81 154 aa9.16□□□□□ -0.94
NUP50-216ENST00000486184 DHRS11Q6UWP2 260 aa9.16□□□□□ -0.94
NUP50-216ENST00000486184 OR2T10Q8NGZ9 312 aa9.16□□□□□ -0.94
NUP50-216ENST00000486184 ZFAND2BQ8WV99 257 aa9.16□□□□□ -0.94
NUP50-216ENST00000486184 MOB3AQ96BX8 217 aa9.16□□□□□ -0.94
NUP50-216ENST00000486184 ADTRPQ96IZ2 230 aa9.16□□□□□ -0.94
NUP50-216ENST00000486184 WDR12Q9GZL7 423 aaKnown RBP9.16□□□□□ -0.94
NUP50-216ENST00000486184 TINAGL1Q9GZM7 467 aaPredicted RBP9.16□□□□□ -0.94
NUP50-216ENST00000486184 MCUBQ9NWR8 336 aa9.16□□□□□ -0.94
NUP50-216ENST00000486184 SDHAF2Q9NX18 166 aa9.16□□□□□ -0.94
NUP50-216ENST00000486184 GAB2Q9UQC2 676 aa9.16□□□□□ -0.94
NUP50-216ENST00000486184 IGKV1D-13A0A0B4J2D9 117 aa9.15□□□□□ -0.94
NUP50-216ENST00000486184 GPR137BO60478 399 aa9.15□□□□□ -0.94
NUP50-216ENST00000486184 MOSP00540 346 aa9.15□□□□□ -0.94
NUP50-216ENST00000486184 IGKV1-13P0DP09 117 aa9.15□□□□□ -0.94
NUP50-216ENST00000486184 PGAM2P15259 253 aa9.15□□□□□ -0.94
NUP50-216ENST00000486184 THBS3P49746 956 aa9.15□□□□□ -0.94
NUP50-216ENST00000486184 PRIMA1Q86XR5 153 aa9.15□□□□□ -0.94
NUP50-216ENST00000486184 TMEM219Q86XT9 240 aa9.15□□□□□ -0.94
NUP50-216ENST00000486184 THNSL2Q86YJ6 484 aa9.15□□□□□ -0.94
NUP50-216ENST00000486184 CMTM1Q8IZ96 169 aa9.15□□□□□ -0.94
NUP50-216ENST00000486184 DRAXINQ8NBI3 349 aaPredicted RBP9.15□□□□□ -0.94
NUP50-216ENST00000486184 ZBTB34Q8NCN2 500 aa9.15□□□□□ -0.94
NUP50-216ENST00000486184 OR4C16Q8NGL9 310 aa9.15□□□□□ -0.94
NUP50-216ENST00000486184 CFHR4Q92496 578 aa9.15□□□□□ -0.94
NUP50-216ENST00000486184 NABP2Q9BQ15 211 aa9.15□□□□□ -0.94
NUP50-216ENST00000486184 ZNF251Q9BRH9 671 aa9.15□□□□□ -0.94
NUP50-216ENST00000486184 SLC25A33Q9BSK2 321 aa9.15□□□□□ -0.94
NUP50-216ENST00000486184 ANK3Q12955 4377 aaKnown RBP9.14□□□□□ -0.95
NUP50-216ENST00000486184 A6NDX4 124 aa9.14□□□□□ -0.95
NUP50-216ENST00000486184 CT45A6P0DMU7 189 aa9.14□□□□□ -0.95
NUP50-216ENST00000486184 CT45A5P0DMU8 189 aa9.14□□□□□ -0.95
NUP50-216ENST00000486184 CT45A7P0DMV0 189 aa9.14□□□□□ -0.95
NUP50-216ENST00000486184 ECI1P42126 302 aa9.14□□□□□ -0.95
NUP50-216ENST00000486184 PPP5CP53041 499 aa9.14□□□□□ -0.95
NUP50-216ENST00000486184 RPL15P61313 204 aaKnown RBP9.14□□□□□ -0.95
NUP50-216ENST00000486184 SRSF2Q01130 221 aaKnown RBP9.14□□□□□ -0.95
NUP50-216ENST00000486184 TAGLNQ01995 201 aaKnown RBP9.14□□□□□ -0.95
NUP50-216ENST00000486184 CATR1Q13166 79 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms