RNA–Protein interactions for RNA: ENST00000486023.1

COL6A1-204, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 2

Gene COL6A1, Length 968 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-204ENST00000486023 RBM7Q9Y580 266 aaKnown RBP13.86□□□□□ -0.19
COL6A1-204ENST00000486023 A3GALT2U3KPV4 340 aa13.86□□□□□ -0.19
COL6A1-204ENST00000486023 PRKDCP78527 4128 aaKnown RBP13.86□□□□□ -0.19
COL6A1-204ENST00000486023 PLXNB1O43157 2135 aa13.85□□□□□ -0.19
COL6A1-204ENST00000486023 G3V318 75 aa13.85□□□□□ -0.19
COL6A1-204ENST00000486023 J3QRK9 145 aa13.85□□□□□ -0.19
COL6A1-204ENST00000486023 CLEC2LP0C7M8 214 aa13.85□□□□□ -0.19
COL6A1-204ENST00000486023 OR8U9P0C7N5 309 aa13.85□□□□□ -0.19
COL6A1-204ENST00000486023 SNRPBP14678 240 aaKnown RBP13.85□□□□□ -0.19
COL6A1-204ENST00000486023 FGF9P31371 208 aaPredicted RBP13.85□□□□□ -0.19
COL6A1-204ENST00000486023 SDC2P34741 201 aa13.85□□□□□ -0.19
COL6A1-204ENST00000486023 THBS3P49746 956 aa13.85□□□□□ -0.19
COL6A1-204ENST00000486023 DEFB136Q30KP8 78 aa13.85□□□□□ -0.19
COL6A1-204ENST00000486023 CDNFQ49AH0 187 aa13.85□□□□□ -0.19
COL6A1-204ENST00000486023 FAM71F2Q6NXP2 309 aa13.85□□□□□ -0.19
COL6A1-204ENST00000486023 OR4A4PQ8NGN8 299 aa13.85□□□□□ -0.19
COL6A1-204ENST00000486023 OR8U1Q8NH10 309 aa13.85□□□□□ -0.19
COL6A1-204ENST00000486023 OR10J5Q8NHC4 309 aa13.85□□□□□ -0.19
COL6A1-204ENST00000486023 MRAPQ8TCY5 172 aa13.85□□□□□ -0.19
COL6A1-204ENST00000486023 OR51J1Q9H342 316 aa13.85□□□□□ -0.19
COL6A1-204ENST00000486023 WASHC3Q9Y3C0 194 aa13.85□□□□□ -0.19
COL6A1-204ENST00000486023 OR5H14A6NHG9 310 aa13.84□□□□□ -0.19
COL6A1-204ENST00000486023 H0YJW9 148 aa13.84□□□□□ -0.19
COL6A1-204ENST00000486023 M0R1X1 148 aa13.84□□□□□ -0.19
COL6A1-204ENST00000486023 MFNGO00587 321 aa13.84□□□□□ -0.19
COL6A1-204ENST00000486023 ITGB1BP1O14713 200 aa13.84□□□□□ -0.19
COL6A1-204ENST00000486023 ATP6V0E1O15342 81 aa13.84□□□□□ -0.19
COL6A1-204ENST00000486023 CD36P16671 472 aa13.84□□□□□ -0.19
COL6A1-204ENST00000486023 HOXD3P31249 432 aaPredicted RBP13.84□□□□□ -0.19
COL6A1-204ENST00000486023 MC5RP33032 325 aa13.84□□□□□ -0.19
COL6A1-204ENST00000486023 RPS16P62249 146 aaKnown RBP13.84□□□□□ -0.19
COL6A1-204ENST00000486023 FOXE3Q13461 319 aa13.84□□□□□ -0.19
COL6A1-204ENST00000486023 KIR2DS1Q14954 304 aa13.84□□□□□ -0.19
COL6A1-204ENST00000486023 ECSCRQ19T08 205 aa13.84□□□□□ -0.19
COL6A1-204ENST00000486023 TMEM65Q6PI78 240 aa13.84□□□□□ -0.19
COL6A1-204ENST00000486023 ETV3LQ6ZN32 361 aa13.84□□□□□ -0.19
COL6A1-204ENST00000486023 LINC00482Q8N8I6 264 aa13.84□□□□□ -0.19
COL6A1-204ENST00000486023 NPBQ8NG41 125 aa13.84□□□□□ -0.19
COL6A1-204ENST00000486023 GINS4Q9BRT9 223 aa13.84□□□□□ -0.19
COL6A1-204ENST00000486023 ST6GALNAC5Q9BVH7 336 aa13.84□□□□□ -0.19
COL6A1-204ENST00000486023 GHITMQ9H3K2 345 aa13.84□□□□□ -0.19
COL6A1-204ENST00000486023 IGHV7-81A0A0B4J1V7 117 aa13.83□□□□□ -0.2
COL6A1-204ENST00000486023 FCN1O00602 326 aa13.83□□□□□ -0.2
COL6A1-204ENST00000486023 HLA-DRB1P01911 266 aa13.83□□□□□ -0.2
COL6A1-204ENST00000486023 TFAP2AP05549 437 aa13.83□□□□□ -0.2
COL6A1-204ENST00000486023 ELANEP08246 267 aa13.83□□□□□ -0.2
COL6A1-204ENST00000486023 OR5H8P0DN80 308 aa13.83□□□□□ -0.2
COL6A1-204ENST00000486023 MYCNOSP40205 109 aa13.83□□□□□ -0.2
COL6A1-204ENST00000486023 SERPINB10P48595 397 aa13.83□□□□□ -0.2
COL6A1-204ENST00000486023 SFXN4Q6P4A7 337 aa13.83□□□□□ -0.2
COL6A1-204ENST00000486023 TPRA1Q86W33 373 aa13.83□□□□□ -0.2
COL6A1-204ENST00000486023 PTX4Q96A99 478 aa13.83□□□□□ -0.2
COL6A1-204ENST00000486023 RCC1LQ96I51 464 aaKnown RBP13.83□□□□□ -0.2
COL6A1-204ENST00000486023 OR5B12Q96R08 314 aa13.83□□□□□ -0.2
COL6A1-204ENST00000486023 AURKAIP1Q9NWT8 199 aaPredicted RBP13.83□□□□□ -0.2
COL6A1-204ENST00000486023 TRAV41A0A0B4J266 112 aa13.82□□□□□ -0.2
COL6A1-204ENST00000486023 CCL24O00175 119 aa13.82□□□□□ -0.2
COL6A1-204ENST00000486023 RRHO14718 337 aa13.82□□□□□ -0.2
COL6A1-204ENST00000486023 PROP1O75360 226 aa13.82□□□□□ -0.2
COL6A1-204ENST00000486023 IGF1P05019 195 aa13.82□□□□□ -0.2
COL6A1-204ENST00000486023 IDNKQ5T6J7 187 aa13.82□□□□□ -0.2
COL6A1-204ENST00000486023 ZNF383Q8NA42 475 aa13.82□□□□□ -0.2
COL6A1-204ENST00000486023 OR5AN1Q8NGI8 311 aa13.82□□□□□ -0.2
COL6A1-204ENST00000486023 LGALS14Q8TCE9 139 aa13.82□□□□□ -0.2
COL6A1-204ENST00000486023 RAX2Q96IS3 184 aa13.82□□□□□ -0.2
COL6A1-204ENST00000486023 OR2D2Q9H210 308 aa13.82□□□□□ -0.2
COL6A1-204ENST00000486023 KLK15Q9H2R5 256 aa13.82□□□□□ -0.2
COL6A1-204ENST00000486023 METTL1Q9UBP6 276 aaKnown RBP13.82□□□□□ -0.2
COL6A1-204ENST00000486023 IGKV1D-8A0A087WSZ0 117 aa13.81□□□□□ -0.2
COL6A1-204ENST00000486023 IGHG4P01861 327 aa13.81□□□□□ -0.2
COL6A1-204ENST00000486023 APOA2P02652 100 aa13.81□□□□□ -0.2
COL6A1-204ENST00000486023 CX3CL1P78423 397 aa13.81□□□□□ -0.2
COL6A1-204ENST00000486023 CFHR3Q02985 330 aa13.81□□□□□ -0.2
COL6A1-204ENST00000486023 PSG5Q15238 335 aa13.81□□□□□ -0.2
COL6A1-204ENST00000486023 REC114Q7Z4M0 266 aa13.81□□□□□ -0.2
COL6A1-204ENST00000486023 CASTOR1Q8WTX7 329 aa13.81□□□□□ -0.2
COL6A1-204ENST00000486023 FAM103A1Q9BTL3 118 aaKnown RBP13.81□□□□□ -0.2
COL6A1-204ENST00000486023 CENPOQ9BU64 300 aa13.81□□□□□ -0.2
COL6A1-204ENST00000486023 SLC35D1Q9NTN3 355 aa13.81□□□□□ -0.2
COL6A1-204ENST00000486023 TRBV6-7A0A0A0MS04 114 aa13.8□□□□□ -0.2
COL6A1-204ENST00000486023 TMEM235A6NFC5 223 aa13.8□□□□□ -0.2
COL6A1-204ENST00000486023 NDUFA3O95167 84 aa13.8□□□□□ -0.2
COL6A1-204ENST00000486023 IGKV1-16P04430 117 aa13.8□□□□□ -0.2
COL6A1-204ENST00000486023 CDX1P47902 265 aaPredicted RBP13.8□□□□□ -0.2
COL6A1-204ENST00000486023 GNG2P59768 71 aa13.8□□□□□ -0.2
COL6A1-204ENST00000486023 KCTD21Q4G0X4 260 aa13.8□□□□□ -0.2
COL6A1-204ENST00000486023 NUDCD2Q8WVJ2 157 aa13.8□□□□□ -0.2
COL6A1-204ENST00000486023 DPF1Q92782 380 aa13.8□□□□□ -0.2
COL6A1-204ENST00000486023 FLYWCH2Q96CP2 140 aaKnown RBP13.8□□□□□ -0.2
COL6A1-204ENST00000486023 P2RX4Q99571 388 aa13.8□□□□□ -0.2
COL6A1-204ENST00000486023 SDHAF2Q9NX18 166 aa13.8□□□□□ -0.2
COL6A1-204ENST00000486023 FBXO7Q9Y3I1 522 aa13.8□□□□□ -0.2
COL6A1-204ENST00000486023 A0A1W2PN81 502 aa13.79□□□□□ -0.2
COL6A1-204ENST00000486023 RBBP9O75884 186 aa13.79□□□□□ -0.2
COL6A1-204ENST00000486023 DUS4LO95620 317 aaKnown RBP13.79□□□□□ -0.2
COL6A1-204ENST00000486023 PSMB8P28062 276 aa13.79□□□□□ -0.2
COL6A1-204ENST00000486023 SLC6A1P30531 599 aa13.79□□□□□ -0.2
COL6A1-204ENST00000486023 CHRNA7P36544 502 aa13.79□□□□□ -0.2
COL6A1-204ENST00000486023 KRTAP10-11P60412 298 aa13.79□□□□□ -0.2
COL6A1-204ENST00000486023 GNB1P62873 340 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms