RNA–Protein interactions for RNA: ENST00000485247.1

PTPN4-210, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 590 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-210ENST00000485247 COQ5Q5HYK3 327 aa3.86□□□□□ -1.79
PTPN4-210ENST00000485247 Q5VSD8 79 aa3.86□□□□□ -1.79
PTPN4-210ENST00000485247 ZNF562Q6V9R5 426 aa3.86□□□□□ -1.79
PTPN4-210ENST00000485247 Q6ZTC4 211 aa3.86□□□□□ -1.79
PTPN4-210ENST00000485247 SPATA12Q7Z6I5 190 aa3.86□□□□□ -1.79
PTPN4-210ENST00000485247 LINC00596Q86U02 117 aa3.86□□□□□ -1.79
PTPN4-210ENST00000485247 UBE2DNLQ8IWF7 75 aa3.86□□□□□ -1.79
PTPN4-210ENST00000485247 AQP11Q8NBQ7 271 aa3.86□□□□□ -1.79
PTPN4-210ENST00000485247 ZNF439Q8NDP4 499 aa3.86□□□□□ -1.79
PTPN4-210ENST00000485247 BBS1Q8NFJ9 593 aa3.86□□□□□ -1.79
PTPN4-210ENST00000485247 OR1L6Q8NGR2 347 aa3.86□□□□□ -1.79
PTPN4-210ENST00000485247 CNIH3Q8TBE1 160 aa3.86□□□□□ -1.79
PTPN4-210ENST00000485247 APOL4Q9BPW4 351 aa3.86□□□□□ -1.79
PTPN4-210ENST00000485247 KRTAP1-5Q9BYS1 174 aa3.86□□□□□ -1.79
PTPN4-210ENST00000485247 YIPF3Q9GZM5 350 aa3.86□□□□□ -1.79
PTPN4-210ENST00000485247 MOB1AQ9H8S9 216 aa3.86□□□□□ -1.79
PTPN4-210ENST00000485247 IL1RAPQ9NPH3 570 aa3.86□□□□□ -1.79
PTPN4-210ENST00000485247 MLXQ9UH92 298 aa3.86□□□□□ -1.79
PTPN4-210ENST00000485247 SNX5Q9Y5X3 404 aa3.86□□□□□ -1.79
PTPN4-210ENST00000485247 R4GMQ9 66 aa3.86□□□□□ -1.79
PTPN4-210ENST00000485247 AGRNO00468 2067 aa3.86□□□□□ -1.79
PTPN4-210ENST00000485247 BBIP1A8MTZ0 92 aa3.85□□□□□ -1.79
PTPN4-210ENST00000485247 MPTX1A8MV57 137 aa3.85□□□□□ -1.79
PTPN4-210ENST00000485247 NME4O00746 187 aa3.85□□□□□ -1.79
PTPN4-210ENST00000485247 IFNA21P01568 189 aa3.85□□□□□ -1.79
PTPN4-210ENST00000485247 IFNA17P01571 189 aa3.85□□□□□ -1.79
PTPN4-210ENST00000485247 HLA-AP01891 365 aaKnown RBP3.85□□□□□ -1.79
PTPN4-210ENST00000485247 MBPP02686 304 aaPredicted RBP3.85□□□□□ -1.79
PTPN4-210ENST00000485247 OCM2P0CE71 109 aa3.85□□□□□ -1.79
PTPN4-210ENST00000485247 OCMP0CE72 109 aaPredicted RBP3.85□□□□□ -1.79
PTPN4-210ENST00000485247 ATF1P18846 271 aa3.85□□□□□ -1.79
PTPN4-210ENST00000485247 PRKACBP22694 351 aa3.85□□□□□ -1.79
PTPN4-210ENST00000485247 HLA-DMBP28068 263 aa3.85□□□□□ -1.79
PTPN4-210ENST00000485247 OR3A3P47888 321 aa3.85□□□□□ -1.79
PTPN4-210ENST00000485247 FXYD3Q14802 87 aa3.85□□□□□ -1.79
PTPN4-210ENST00000485247 MED22Q15528 200 aa3.85□□□□□ -1.79
PTPN4-210ENST00000485247 MICAQ29983 383 aa3.85□□□□□ -1.79
PTPN4-210ENST00000485247 Q3ZCU0 254 aa3.85□□□□□ -1.79
PTPN4-210ENST00000485247 METTL21CQ5VZV1 264 aa3.85□□□□□ -1.79
PTPN4-210ENST00000485247 BTNL8Q6UX41 500 aa3.85□□□□□ -1.79
PTPN4-210ENST00000485247 FAM131AQ6UXB0 335 aa3.85□□□□□ -1.79
PTPN4-210ENST00000485247 CPOQ8IVL8 374 aa3.85□□□□□ -1.79
PTPN4-210ENST00000485247 ODF3L1Q8IXM7 274 aa3.85□□□□□ -1.79
PTPN4-210ENST00000485247 OR5B3Q8NH48 314 aa3.85□□□□□ -1.79
PTPN4-210ENST00000485247 OR4A5Q8NH83 315 aa3.85□□□□□ -1.79
PTPN4-210ENST00000485247 TEX47Q8TBZ9 253 aa3.85□□□□□ -1.79
PTPN4-210ENST00000485247 ASB17Q8WXJ9 295 aa3.85□□□□□ -1.79
PTPN4-210ENST00000485247 THRSPQ92748 146 aa3.85□□□□□ -1.79
PTPN4-210ENST00000485247 USMG5Q96IX5 58 aa3.85□□□□□ -1.79
PTPN4-210ENST00000485247 OPALINQ96PE5 141 aa3.85□□□□□ -1.79
PTPN4-210ENST00000485247 RNF126Q9BV68 326 aa3.85□□□□□ -1.79
PTPN4-210ENST00000485247 MAP6D1Q9H9H5 199 aa3.85□□□□□ -1.79
PTPN4-210ENST00000485247 COA4Q9NYJ1 87 aa3.85□□□□□ -1.79
PTPN4-210ENST00000485247 ZNF581Q9P0T4 197 aa3.85□□□□□ -1.79
PTPN4-210ENST00000485247 METTL1Q9UBP6 276 aaKnown RBP3.85□□□□□ -1.79
PTPN4-210ENST00000485247 SAMD4AQ9UPU9 718 aaKnown RBP3.85□□□□□ -1.79
PTPN4-210ENST00000485247 AP3M1Q9Y2T2 418 aa3.85□□□□□ -1.79
PTPN4-210ENST00000485247 TMEM30CPA0ZSE6 113 aa3.84□□□□□ -1.79
PTPN4-210ENST00000485247 ZNF320A2RRD8 509 aa3.84□□□□□ -1.79
PTPN4-210ENST00000485247 PPP5D1E7EU14 171 aa3.84□□□□□ -1.79
PTPN4-210ENST00000485247 H3BN98 237 aa3.84□□□□□ -1.79
PTPN4-210ENST00000485247 ORC5O43913 435 aa3.84□□□□□ -1.79
PTPN4-210ENST00000485247 ACTL6BO94805 426 aa3.84□□□□□ -1.79
PTPN4-210ENST00000485247 CCNB2O95067 398 aa3.84□□□□□ -1.79
PTPN4-210ENST00000485247 S1PR2O95136 353 aa3.84□□□□□ -1.79
PTPN4-210ENST00000485247 OR2C1O95371 312 aa3.84□□□□□ -1.79
PTPN4-210ENST00000485247 AMBPP02760 352 aa3.84□□□□□ -1.79
PTPN4-210ENST00000485247 SEMG1P04279 462 aa3.84□□□□□ -1.79
PTPN4-210ENST00000485247 SCTP09683 121 aa3.84□□□□□ -1.79
PTPN4-210ENST00000485247 APELAP0DMC3 54 aa3.84□□□□□ -1.79
PTPN4-210ENST00000485247 LGALS7P47929 136 aa3.84□□□□□ -1.79
PTPN4-210ENST00000485247 KCNJ3P48549 501 aa3.84□□□□□ -1.79
PTPN4-210ENST00000485247 CXCR4P61073 352 aa3.84□□□□□ -1.79
PTPN4-210ENST00000485247 MAGOHP61326 146 aaKnown RBP3.84□□□□□ -1.79
PTPN4-210ENST00000485247 PAX5Q02548 391 aa3.84□□□□□ -1.79
PTPN4-210ENST00000485247 PPP1R8Q12972 351 aaKnown RBP3.84□□□□□ -1.79
PTPN4-210ENST00000485247 ZSCAN26Q16670 478 aa3.84□□□□□ -1.79
PTPN4-210ENST00000485247 SLC35D3Q5M8T2 416 aa3.84□□□□□ -1.79
PTPN4-210ENST00000485247 SERTAD4-AS1Q5TG53 156 aa3.84□□□□□ -1.79
PTPN4-210ENST00000485247 FAM90A2PQ658T7 463 aa3.84□□□□□ -1.79
PTPN4-210ENST00000485247 GLYATQ6IB77 296 aa3.84□□□□□ -1.79
PTPN4-210ENST00000485247 ZNF322Q6U7Q0 402 aaPredicted RBP3.84□□□□□ -1.79
PTPN4-210ENST00000485247 GLDNQ6ZMI3 551 aaPredicted RBP3.84□□□□□ -1.79
PTPN4-210ENST00000485247 RBPMS2Q6ZRY4 209 aaKnown RBP3.84□□□□□ -1.79
PTPN4-210ENST00000485247 ZNF767PQ75MW2 155 aa3.84□□□□□ -1.79
PTPN4-210ENST00000485247 ARPINQ7Z6K5 226 aa3.84□□□□□ -1.79
PTPN4-210ENST00000485247 SLC38A6Q8IZM9 456 aa3.84□□□□□ -1.79
PTPN4-210ENST00000485247 CENPSQ8N2Z9 138 aa3.84□□□□□ -1.79
PTPN4-210ENST00000485247 SUMF2Q8NBJ7 301 aa3.84□□□□□ -1.79
PTPN4-210ENST00000485247 UXS1Q8NBZ7 420 aa3.84□□□□□ -1.79
PTPN4-210ENST00000485247 OR1L1Q8NH94 360 aa3.84□□□□□ -1.79
PTPN4-210ENST00000485247 KCNG3Q8TAE7 436 aa3.84□□□□□ -1.79
PTPN4-210ENST00000485247 PP6455Q8WZ26 134 aa3.84□□□□□ -1.79
PTPN4-210ENST00000485247 MCUR1Q96AQ8 359 aa3.84□□□□□ -1.79
PTPN4-210ENST00000485247 FGGYQ96C11 551 aa3.84□□□□□ -1.79
PTPN4-210ENST00000485247 ADAT3Q96EY9 351 aaPredicted RBP3.84□□□□□ -1.79
PTPN4-210ENST00000485247 GALNT14Q96FL9 552 aa3.84□□□□□ -1.79
PTPN4-210ENST00000485247 KCTD14Q9BQ13 255 aaPredicted RBP3.84□□□□□ -1.79
PTPN4-210ENST00000485247 CHRDL1Q9BU40 450 aa3.84□□□□□ -1.79
PTPN4-210ENST00000485247 NDUFAF3Q9BU61 184 aa3.84□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms