RNA–Protein interactions for RNA: ENST00000484799.1

SMC4-215, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 478 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-215ENST00000484799 ADM2Q7Z4H4 148 aa1.9□□□□□ -2.11
SMC4-215ENST00000484799 NAA40Q86UY6 237 aa1.9□□□□□ -2.11
SMC4-215ENST00000484799 HS3ST5Q8IZT8 346 aa1.9□□□□□ -2.11
SMC4-215ENST00000484799 ZNF664Q8N3J9 261 aa1.9□□□□□ -2.11
SMC4-215ENST00000484799 Q8NAQ8 132 aa1.9□□□□□ -2.11
SMC4-215ENST00000484799 OR8K1Q8NGG5 319 aa1.9□□□□□ -2.11
SMC4-215ENST00000484799 OR2D3Q8NGH3 330 aa1.9□□□□□ -2.11
SMC4-215ENST00000484799 OR2V1Q8NHB1 315 aa1.9□□□□□ -2.11
SMC4-215ENST00000484799 TVP23CQ96ET8 276 aa1.9□□□□□ -2.11
SMC4-215ENST00000484799 CPNE2Q96FN4 548 aaPredicted RBP1.9□□□□□ -2.11
SMC4-215ENST00000484799 ANKRD36BP1Q96IX9 119 aa1.9□□□□□ -2.11
SMC4-215ENST00000484799 EMC3Q9P0I2 261 aa1.9□□□□□ -2.11
SMC4-215ENST00000484799 DKKL1Q9UK85 242 aa1.9□□□□□ -2.11
SMC4-215ENST00000484799 VPREB3Q9UKI3 123 aa1.9□□□□□ -2.11
SMC4-215ENST00000484799 MCTS1Q9ULC4 181 aaKnown RBP1.9□□□□□ -2.11
SMC4-215ENST00000484799 HHLA2Q9UM44 414 aa1.9□□□□□ -2.11
SMC4-215ENST00000484799 GUCA1BQ9UMX6 200 aa1.9□□□□□ -2.11
SMC4-215ENST00000484799 SHANK1Q9Y566 2161 aa1.89□□□□□ -2.11
SMC4-215ENST00000484799 SHROOM3Q8TF72 1996 aa1.89□□□□□ -2.11
SMC4-215ENST00000484799 DHRS12A0PJE2 317 aa1.89□□□□□ -2.11
SMC4-215ENST00000484799 DISC1C4P0D8 188 aa1.89□□□□□ -2.11
SMC4-215ENST00000484799 MRASO14807 208 aa1.89□□□□□ -2.11
SMC4-215ENST00000484799 GSTZ1O43708 216 aaPredicted RBP1.89□□□□□ -2.11
SMC4-215ENST00000484799 CDS2O95674 445 aa1.89□□□□□ -2.11
SMC4-215ENST00000484799 LINC00313P59037 77 aa1.89□□□□□ -2.11
SMC4-215ENST00000484799 TAS2R45P59539 299 aa1.89□□□□□ -2.11
SMC4-215ENST00000484799 MYL6P60660 151 aa1.89□□□□□ -2.11
SMC4-215ENST00000484799 HOXC5Q00444 222 aa1.89□□□□□ -2.11
SMC4-215ENST00000484799 ITGB3BPQ13352 177 aaPredicted RBP1.89□□□□□ -2.11
SMC4-215ENST00000484799 SLC9A3R2Q15599 337 aa1.89□□□□□ -2.11
SMC4-215ENST00000484799 CST6Q15828 149 aa1.89□□□□□ -2.11
SMC4-215ENST00000484799 KRTAP25-1Q3LHN0 102 aa1.89□□□□□ -2.11
SMC4-215ENST00000484799 MRPL51Q4U2R6 128 aaKnown RBP1.89□□□□□ -2.11
SMC4-215ENST00000484799 FAM78BQ5VT40 261 aa1.89□□□□□ -2.11
SMC4-215ENST00000484799 RASSF6Q6ZTQ3 369 aa1.89□□□□□ -2.11
SMC4-215ENST00000484799 TCF24Q7RTU0 167 aa1.89□□□□□ -2.11
SMC4-215ENST00000484799 COMMD7Q86VX2 200 aa1.89□□□□□ -2.11
SMC4-215ENST00000484799 ZNF565Q8N9K5 539 aa1.89□□□□□ -2.11
SMC4-215ENST00000484799 TMEM161BQ8NDZ6 487 aa1.89□□□□□ -2.11
SMC4-215ENST00000484799 C16orf78Q8WTQ4 265 aa1.89□□□□□ -2.11
SMC4-215ENST00000484799 EEF1AKMT1Q8WVE0 214 aa1.89□□□□□ -2.11
SMC4-215ENST00000484799 RAD51AP1Q96B01 352 aa1.89□□□□□ -2.11
SMC4-215ENST00000484799 STACQ99469 402 aa1.89□□□□□ -2.11
SMC4-215ENST00000484799 MND1Q9BWT6 205 aa1.89□□□□□ -2.11
SMC4-215ENST00000484799 NKX6-2Q9C056 277 aaPredicted RBP1.89□□□□□ -2.11
SMC4-215ENST00000484799 FKBP14Q9NWM8 211 aa1.89□□□□□ -2.11
SMC4-215ENST00000484799 CARHSP1Q9Y2V2 147 aaKnown RBP1.89□□□□□ -2.11
SMC4-215ENST00000484799 PCYT1BQ9Y5K3 369 aaPredicted RBP1.89□□□□□ -2.11
SMC4-215ENST00000484799 THSD7AQ9UPZ6 1657 aa1.88□□□□□ -2.11
SMC4-215ENST00000484799 TP53I11O14683 189 aa1.88□□□□□ -2.11
SMC4-215ENST00000484799 KRT75O95678 551 aa1.88□□□□□ -2.11
SMC4-215ENST00000484799 RPS12P25398 132 aaKnown RBP1.88□□□□□ -2.11
SMC4-215ENST00000484799 OR10J1P30954 320 aa1.88□□□□□ -2.11
SMC4-215ENST00000484799 PPP1CCP36873 323 aaKnown RBP1.88□□□□□ -2.11
SMC4-215ENST00000484799 BAMBIQ13145 260 aa1.88□□□□□ -2.11
SMC4-215ENST00000484799 HIST3H3Q16695 136 aa1.88□□□□□ -2.11
SMC4-215ENST00000484799 PLPPR5Q32ZL2 321 aa1.88□□□□□ -2.11
SMC4-215ENST00000484799 ACSM3Q53FZ2 586 aa1.88□□□□□ -2.11
SMC4-215ENST00000484799 PYDC2Q56P42 97 aa1.88□□□□□ -2.11
SMC4-215ENST00000484799 TMPPEQ6ZT21 453 aa1.88□□□□□ -2.11
SMC4-215ENST00000484799 CCDC121Q6ZUS5 278 aa1.88□□□□□ -2.11
SMC4-215ENST00000484799 GPR32P1Q8NGA4 272 aa1.88□□□□□ -2.11
SMC4-215ENST00000484799 OR10P1Q8NGE3 313 aa1.88□□□□□ -2.11
SMC4-215ENST00000484799 MUC7Q8TAX7 377 aa1.88□□□□□ -2.11
SMC4-215ENST00000484799 GPR119Q8TDV5 335 aa1.88□□□□□ -2.11
SMC4-215ENST00000484799 IGF2BP2-AS1Q96M15 143 aa1.88□□□□□ -2.11
SMC4-215ENST00000484799 PKMYT1Q99640 499 aa1.88□□□□□ -2.11
SMC4-215ENST00000484799 LSM5Q9Y4Y9 91 aaKnown RBP1.88□□□□□ -2.11
SMC4-215ENST00000484799 COL5A1P20908 1838 aaPredicted RBP1.88□□□□□ -2.11
SMC4-215ENST00000484799 PTPRJQ12913 1337 aa1.88□□□□□ -2.11
SMC4-215ENST00000484799 DSCAML1Q8TD84 2053 aa1.87□□□□□ -2.11
SMC4-215ENST00000484799 OTOFQ9HC10 1997 aa1.87□□□□□ -2.11
SMC4-215ENST00000484799 A0A1B0GV50 99 aa1.87□□□□□ -2.11
SMC4-215ENST00000484799 GRIFINA4D1Z8 144 aa1.87□□□□□ -2.11
SMC4-215ENST00000484799 CD36P16671 472 aa1.87□□□□□ -2.11
SMC4-215ENST00000484799 NPPCP23582 126 aa1.87□□□□□ -2.11
SMC4-215ENST00000484799 TMEM33P57088 247 aa1.87□□□□□ -2.11
SMC4-215ENST00000484799 DEFA6Q01524 100 aa1.87□□□□□ -2.11
SMC4-215ENST00000484799 EMX1Q04741 257 aaPredicted RBP1.87□□□□□ -2.11
SMC4-215ENST00000484799 C1orf195Q5TG92 126 aa1.87□□□□□ -2.11
SMC4-215ENST00000484799 C5orf46Q6UWT4 87 aa1.87□□□□□ -2.11
SMC4-215ENST00000484799 SDIM1Q6ZPB5 146 aa1.87□□□□□ -2.11
SMC4-215ENST00000484799 LYPD6Q86Y78 171 aa1.87□□□□□ -2.11
SMC4-215ENST00000484799 ZNF567Q8N184 647 aa1.87□□□□□ -2.11
SMC4-215ENST00000484799 UBL4BQ8N7F7 174 aa1.87□□□□□ -2.11
SMC4-215ENST00000484799 LY6G5BQ8NDX9 201 aa1.87□□□□□ -2.11
SMC4-215ENST00000484799 FNDC9Q8TBE3 224 aa1.87□□□□□ -2.11
SMC4-215ENST00000484799 PPP1R14BQ96C90 147 aa1.87□□□□□ -2.11
SMC4-215ENST00000484799 UPK3BQ9BT76 320 aa1.87□□□□□ -2.11
SMC4-215ENST00000484799 SMDT1Q9H4I9 107 aa1.87□□□□□ -2.11
SMC4-215ENST00000484799 OR51B4Q9Y5P0 310 aa1.87□□□□□ -2.11
SMC4-215ENST00000484799 SNAPC4Q5SXM2 1469 aa1.87□□□□□ -2.11
SMC4-215ENST00000484799 NAV1Q8NEY1 1877 aa1.86□□□□□ -2.11
SMC4-215ENST00000484799 DICER1Q9UPY3 1922 aaKnown RBP1.86□□□□□ -2.11
SMC4-215ENST00000484799 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP1.86□□□□□ -2.11
SMC4-215ENST00000484799 IGSF23A1L1A6 192 aa1.86□□□□□ -2.11
SMC4-215ENST00000484799 M0R381 172 aa1.86□□□□□ -2.11
SMC4-215ENST00000484799 SLC17A3O00476 420 aa1.86□□□□□ -2.11
SMC4-215ENST00000484799 RPP14O95059 124 aaKnown RBP1.86□□□□□ -2.11
SMC4-215ENST00000484799 HIST1H1EP10412 219 aaKnown RBP1.86□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms