RNA–Protein interactions for RNA: ENST00000483969.5

COL8A1-207, Transcript of collagen type VIII alpha 1 chain, humanhuman

TSL 3

Gene COL8A1, Length 832 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-207ENST00000483969 CTXN2P0C2S0 81 aa7.13□□□□□ -1.27
COL8A1-207ENST00000483969 ZNF182P17025 639 aaPredicted RBP7.13□□□□□ -1.27
COL8A1-207ENST00000483969 MDKP21741 143 aaPredicted RBP7.13□□□□□ -1.27
COL8A1-207ENST00000483969 CD24P25063 80 aa7.13□□□□□ -1.27
COL8A1-207ENST00000483969 CD1BP29016 333 aa7.13□□□□□ -1.27
COL8A1-207ENST00000483969 ZNF137PP52743 207 aa7.13□□□□□ -1.27
COL8A1-207ENST00000483969 HES1Q14469 280 aa7.13□□□□□ -1.27
COL8A1-207ENST00000483969 GNMTQ14749 295 aa7.13□□□□□ -1.27
COL8A1-207ENST00000483969 CTF1Q16619 201 aa7.13□□□□□ -1.27
COL8A1-207ENST00000483969 UBE2NLQ5JXB2 153 aa7.13□□□□□ -1.27
COL8A1-207ENST00000483969 FAM53AQ6NSI3 398 aaPredicted RBP7.13□□□□□ -1.27
COL8A1-207ENST00000483969 C11orf88Q6PI97 169 aa7.13□□□□□ -1.27
COL8A1-207ENST00000483969 CCBE1Q6UXH8 406 aaPredicted RBP7.13□□□□□ -1.27
COL8A1-207ENST00000483969 Q6ZS49 121 aa7.13□□□□□ -1.27
COL8A1-207ENST00000483969 Q6ZSV7 163 aa7.13□□□□□ -1.27
COL8A1-207ENST00000483969 C5orf24Q7Z6I8 188 aa7.13□□□□□ -1.27
COL8A1-207ENST00000483969 CLVS1Q8IUQ0 354 aaPredicted RBP7.13□□□□□ -1.27
COL8A1-207ENST00000483969 DRAM1Q8N682 238 aa7.13□□□□□ -1.27
COL8A1-207ENST00000483969 OR10J5Q8NHC4 309 aa7.13□□□□□ -1.27
COL8A1-207ENST00000483969 OR2T6Q8NHC8 308 aa7.13□□□□□ -1.27
COL8A1-207ENST00000483969 LINC01006Q8NI28 216 aa7.13□□□□□ -1.27
COL8A1-207ENST00000483969 RTN4IP1Q8WWV3 396 aaPredicted RBP7.13□□□□□ -1.27
COL8A1-207ENST00000483969 AP3S1Q92572 193 aa7.13□□□□□ -1.27
COL8A1-207ENST00000483969 ST6GALNAC6Q969X2 333 aa7.13□□□□□ -1.27
COL8A1-207ENST00000483969 RBM14Q96PK6 669 aaKnown RBP7.13□□□□□ -1.27
COL8A1-207ENST00000483969 S1PR3Q99500 378 aa7.13□□□□□ -1.27
COL8A1-207ENST00000483969 BCL7BQ9BQE9 202 aa7.13□□□□□ -1.27
COL8A1-207ENST00000483969 ABHD14AQ9BUJ0 271 aa7.13□□□□□ -1.27
COL8A1-207ENST00000483969 ST6GALNAC5Q9BVH7 336 aa7.13□□□□□ -1.27
COL8A1-207ENST00000483969 SLC23A1Q9UHI7 598 aa7.13□□□□□ -1.27
COL8A1-207ENST00000483969 NAV3Q8IVL0 2385 aa7.13□□□□□ -1.27
COL8A1-207ENST00000483969 SVEP1Q4LDE5 3571 aa7.13□□□□□ -1.27
COL8A1-207ENST00000483969 FBN1P35555 2871 aaKnown RBP7.12□□□□□ -1.27
COL8A1-207ENST00000483969 KRTAP23-1A1A580 65 aa7.12□□□□□ -1.27
COL8A1-207ENST00000483969 M0QZK8 103 aa7.12□□□□□ -1.27
COL8A1-207ENST00000483969 RAB29O14966 203 aa7.12□□□□□ -1.27
COL8A1-207ENST00000483969 SLC31A2O15432 143 aa7.12□□□□□ -1.27
COL8A1-207ENST00000483969 XRCC3O43542 346 aa7.12□□□□□ -1.27
COL8A1-207ENST00000483969 NOL3O60936 208 aaKnown RBP7.12□□□□□ -1.27
COL8A1-207ENST00000483969 OR2F2O95006 317 aa7.12□□□□□ -1.27
COL8A1-207ENST00000483969 SNRNP70P08621 437 aaKnown RBP7.12□□□□□ -1.27
COL8A1-207ENST00000483969 GSTT2P0CG29 244 aa7.12□□□□□ -1.27
COL8A1-207ENST00000483969 GSTT2BP0CG30 244 aa7.12□□□□□ -1.27
COL8A1-207ENST00000483969 SOX6P35712 828 aa7.12□□□□□ -1.27
COL8A1-207ENST00000483969 CBX5P45973 191 aa7.12□□□□□ -1.27
COL8A1-207ENST00000483969 REG1BP48304 166 aa7.12□□□□□ -1.27
COL8A1-207ENST00000483969 TMBIM6P55061 237 aa7.12□□□□□ -1.27
COL8A1-207ENST00000483969 CD83Q01151 205 aa7.12□□□□□ -1.27
COL8A1-207ENST00000483969 DIAPH2-AS1Q14236 149 aa7.12□□□□□ -1.27
COL8A1-207ENST00000483969 Q6ZPA2 131 aa7.12□□□□□ -1.27
COL8A1-207ENST00000483969 ZNF575Q86XF7 245 aa7.12□□□□□ -1.27
COL8A1-207ENST00000483969 TMEM219Q86XT9 240 aa7.12□□□□□ -1.27
COL8A1-207ENST00000483969 SAMD12Q8N8I0 201 aa7.12□□□□□ -1.27
COL8A1-207ENST00000483969 OR2T10Q8NGZ9 312 aa7.12□□□□□ -1.27
COL8A1-207ENST00000483969 OR56B4Q8NH76 319 aa7.12□□□□□ -1.27
COL8A1-207ENST00000483969 RAB2BQ8WUD1 216 aa7.12□□□□□ -1.27
COL8A1-207ENST00000483969 TAF15Q92804 592 aaKnown RBP eCLIP7.12□□□□□ -1.27
COL8A1-207ENST00000483969 SLC25A38Q96DW6 304 aa7.12□□□□□ -1.27
COL8A1-207ENST00000483969 SLC25A33Q9BSK2 321 aa7.12□□□□□ -1.27
COL8A1-207ENST00000483969 NAA50Q9GZZ1 169 aaKnown RBP7.12□□□□□ -1.27
COL8A1-207ENST00000483969 C11orf54Q9H0W9 315 aaPredicted RBP7.12□□□□□ -1.27
COL8A1-207ENST00000483969 AUNIPQ9H7T9 357 aa7.12□□□□□ -1.27
COL8A1-207ENST00000483969 COMMD3Q9UBI1 195 aa7.12□□□□□ -1.27
COL8A1-207ENST00000483969 ZNF230Q9UIE0 474 aaPredicted RBP7.12□□□□□ -1.27
COL8A1-207ENST00000483969 ZNF221Q9UK13 617 aa7.12□□□□□ -1.27
COL8A1-207ENST00000483969 JMJD1CQ15652 2540 aa7.12□□□□□ -1.27
COL8A1-207ENST00000483969 TRBV6-7A0A0A0MS04 114 aa7.11□□□□□ -1.27
COL8A1-207ENST00000483969 A0A1W2PPI3 338 aa7.11□□□□□ -1.27
COL8A1-207ENST00000483969 TMEM235A6NFC5 223 aa7.11□□□□□ -1.27
COL8A1-207ENST00000483969 BET1O15155 118 aa7.11□□□□□ -1.27
COL8A1-207ENST00000483969 CHST1O43916 411 aa7.11□□□□□ -1.27
COL8A1-207ENST00000483969 IGKV1D-33P01593 117 aa7.11□□□□□ -1.27
COL8A1-207ENST00000483969 IGKV1-33P01594 117 aa7.11□□□□□ -1.27
COL8A1-207ENST00000483969 APOA1P02647 267 aa7.11□□□□□ -1.27
COL8A1-207ENST00000483969 TMEM11P17152 192 aa7.11□□□□□ -1.27
COL8A1-207ENST00000483969 EBI3Q14213 229 aa7.11□□□□□ -1.27
COL8A1-207ENST00000483969 HABP2Q14520 560 aaPredicted RBP7.11□□□□□ -1.27
COL8A1-207ENST00000483969 HNF4GQ14541 408 aa7.11□□□□□ -1.27
COL8A1-207ENST00000483969 FAM71F2Q6NXP2 309 aa7.11□□□□□ -1.27
COL8A1-207ENST00000483969 CNIH2Q6PI25 160 aa7.11□□□□□ -1.27
COL8A1-207ENST00000483969 IZUMO1Q8IYV9 350 aa7.11□□□□□ -1.27
COL8A1-207ENST00000483969 OR8H1Q8NGG4 311 aa7.11□□□□□ -1.27
COL8A1-207ENST00000483969 GINS4Q9BRT9 223 aa7.11□□□□□ -1.27
COL8A1-207ENST00000483969 TOLLIPQ9H0E2 274 aa7.11□□□□□ -1.27
COL8A1-207ENST00000483969 RDH8Q9NYR8 311 aa7.11□□□□□ -1.27
COL8A1-207ENST00000483969 OR1A1Q9P1Q5 309 aa7.11□□□□□ -1.27
COL8A1-207ENST00000483969 ELF5Q9UKW6 265 aaPredicted RBP7.11□□□□□ -1.27
COL8A1-207ENST00000483969 GAB2Q9UQC2 676 aa7.11□□□□□ -1.27
COL8A1-207ENST00000483969 RBM7Q9Y580 266 aaKnown RBP7.11□□□□□ -1.27
COL8A1-207ENST00000483969 MXRA5Q9NR99 2828 aa7.11□□□□□ -1.27
COL8A1-207ENST00000483969 IGKV1-6A0A0C4DH72 117 aa7.1□□□□□ -1.27
COL8A1-207ENST00000483969 NCBP2LA6PVI3 153 aaKnown RBP7.1□□□□□ -1.27
COL8A1-207ENST00000483969 PEX14O75381 377 aa7.1□□□□□ -1.27
COL8A1-207ENST00000483969 MOSP00540 346 aa7.1□□□□□ -1.27
COL8A1-207ENST00000483969 MC5RP33032 325 aa7.1□□□□□ -1.27
COL8A1-207ENST00000483969 PRSS3P35030 304 aa7.1□□□□□ -1.27
COL8A1-207ENST00000483969 BLCAPP62952 87 aa7.1□□□□□ -1.27
COL8A1-207ENST00000483969 IGSF11Q5DX21 431 aa7.1□□□□□ -1.27
COL8A1-207ENST00000483969 TMEM69Q5SWH9 247 aa7.1□□□□□ -1.27
COL8A1-207ENST00000483969 ZNF833PQ6ZTB9 187 aa7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms