RNA–Protein interactions for RNA: ENST00000483876.1

COL17A1-206, Transcript of collagen type XVII alpha 1 chain, humanhuman

TSL 5

Gene COL17A1, Length 622 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-206ENST00000483876 hADV38S2A0JD32 116 aa4.48□□□□□ -1.69
COL17A1-206ENST00000483876 ZNF729A6NN14 1252 aaPredicted RBP4.48□□□□□ -1.69
COL17A1-206ENST00000483876 MPTX1A8MV57 137 aa4.48□□□□□ -1.69
COL17A1-206ENST00000483876 DEFB108AA8MXU0 73 aa4.48□□□□□ -1.69
COL17A1-206ENST00000483876 C3orf80F5H4A9 247 aa4.48□□□□□ -1.69
COL17A1-206ENST00000483876 H0YIZ8 118 aa4.48□□□□□ -1.69
COL17A1-206ENST00000483876 CCSO14618 274 aa4.48□□□□□ -1.69
COL17A1-206ENST00000483876 HSD17B6O14756 317 aa4.48□□□□□ -1.69
COL17A1-206ENST00000483876 GPR37O15354 613 aa4.48□□□□□ -1.69
COL17A1-206ENST00000483876 BCL2L11O43521 198 aa4.48□□□□□ -1.69
COL17A1-206ENST00000483876 PITX3O75364 302 aa4.48□□□□□ -1.69
COL17A1-206ENST00000483876 DEDDO75618 318 aa4.48□□□□□ -1.69
COL17A1-206ENST00000483876 RP2O75695 350 aa4.48□□□□□ -1.69
COL17A1-206ENST00000483876 SERPINE2P07093 398 aa4.48□□□□□ -1.69
COL17A1-206ENST00000483876 OR8U9P0C7N5 309 aa4.48□□□□□ -1.69
COL17A1-206ENST00000483876 P2RY1P47900 373 aa4.48□□□□□ -1.69
COL17A1-206ENST00000483876 CEBPDP49716 269 aaPredicted RBP4.48□□□□□ -1.69
COL17A1-206ENST00000483876 RAB7AP51149 207 aa4.48□□□□□ -1.69
COL17A1-206ENST00000483876 LOXL3P58215 753 aa4.48□□□□□ -1.69
COL17A1-206ENST00000483876 RAB14P61106 215 aa4.48□□□□□ -1.69
COL17A1-206ENST00000483876 CCL8P80075 99 aa4.48□□□□□ -1.69
COL17A1-206ENST00000483876 EIF4EBP1Q13541 118 aaPredicted RBP4.48□□□□□ -1.69
COL17A1-206ENST00000483876 RAB32Q13637 225 aa4.48□□□□□ -1.69
COL17A1-206ENST00000483876 SMCO1Q147U7 214 aa4.48□□□□□ -1.69
COL17A1-206ENST00000483876 MORN2Q502X0 79 aa4.48□□□□□ -1.69
COL17A1-206ENST00000483876 NMSQ5H8A3 153 aa4.48□□□□□ -1.69
COL17A1-206ENST00000483876 CLLU1Q5K131 121 aa4.48□□□□□ -1.69
COL17A1-206ENST00000483876 PRSS57Q6UWY2 283 aa4.48□□□□□ -1.69
COL17A1-206ENST00000483876 LRRC75A-AS1Q8N1F1 130 aa4.48□□□□□ -1.69
COL17A1-206ENST00000483876 MUC15Q8N387 334 aa4.48□□□□□ -1.69
COL17A1-206ENST00000483876 SLC35G3Q8N808 338 aa4.48□□□□□ -1.69
COL17A1-206ENST00000483876 C8orf31Q8N9H6 132 aa4.48□□□□□ -1.69
COL17A1-206ENST00000483876 ZNF436-AS1Q8NC38 126 aaPredicted RBP4.48□□□□□ -1.69
COL17A1-206ENST00000483876 ZNRF1Q8ND25 227 aa4.48□□□□□ -1.69
COL17A1-206ENST00000483876 OR52L2PQ8NGH6 319 aa4.48□□□□□ -1.69
COL17A1-206ENST00000483876 OR4D5Q8NGN0 318 aa4.48□□□□□ -1.69
COL17A1-206ENST00000483876 OR13A1Q8NGR1 328 aa4.48□□□□□ -1.69
COL17A1-206ENST00000483876 OR8U1Q8NH10 309 aa4.48□□□□□ -1.69
COL17A1-206ENST00000483876 STOML3Q8TAV4 291 aa4.48□□□□□ -1.69
COL17A1-206ENST00000483876 LRRC20Q8TCA0 184 aa4.48□□□□□ -1.69
COL17A1-206ENST00000483876 MRGPRDQ8TDS7 321 aa4.48□□□□□ -1.69
COL17A1-206ENST00000483876 SCARB1Q8WTV0 552 aa4.48□□□□□ -1.69
COL17A1-206ENST00000483876 GAFA1Q96PS6 74 aa4.48□□□□□ -1.69
COL17A1-206ENST00000483876 HSD17B10Q99714 261 aaKnown RBP4.48□□□□□ -1.69
COL17A1-206ENST00000483876 DYNLRB1Q9NP97 96 aa4.48□□□□□ -1.69
COL17A1-206ENST00000483876 YAE1D1Q9NRH1 226 aa4.48□□□□□ -1.69
COL17A1-206ENST00000483876 TMEM106BQ9NUM4 274 aa4.48□□□□□ -1.69
COL17A1-206ENST00000483876 LIN7CQ9NUP9 197 aaKnown RBP4.48□□□□□ -1.69
COL17A1-206ENST00000483876 MED9Q9NWA0 146 aa4.48□□□□□ -1.69
COL17A1-206ENST00000483876 GSKIPQ9P0R6 139 aa4.48□□□□□ -1.69
COL17A1-206ENST00000483876 OR1A1Q9P1Q5 309 aa4.48□□□□□ -1.69
COL17A1-206ENST00000483876 MBD2Q9UBB5 411 aa4.48□□□□□ -1.69
COL17A1-206ENST00000483876 UBQLN2Q9UHD9 624 aa4.48□□□□□ -1.69
COL17A1-206ENST00000483876 LAMP3Q9UQV4 416 aa4.48□□□□□ -1.69
COL17A1-206ENST00000483876 RBM7Q9Y580 266 aaKnown RBP4.48□□□□□ -1.69
COL17A1-206ENST00000483876 LINC00312Q9Y6C7 94 aa4.48□□□□□ -1.69
COL17A1-206ENST00000483876 ZANQ9Y493 2812 aa4.48□□□□□ -1.69
COL17A1-206ENST00000483876 AKAP6Q13023 2319 aa4.47□□□□□ -1.69
COL17A1-206ENST00000483876 TRAV39A0A0B4J263 110 aa4.47□□□□□ -1.69
COL17A1-206ENST00000483876 IGHV1-69-2A0A0G2JMI3 117 aa4.47□□□□□ -1.69
COL17A1-206ENST00000483876 LINC00862A6NCI5 91 aa4.47□□□□□ -1.69
COL17A1-206ENST00000483876 NKX6-3A6NJ46 265 aa4.47□□□□□ -1.69
COL17A1-206ENST00000483876 A6NNC1 897 aa4.47□□□□□ -1.69
COL17A1-206ENST00000483876 FAM90A26D6RGX4 464 aa4.47□□□□□ -1.69
COL17A1-206ENST00000483876 K7EPK0 472 aa4.47□□□□□ -1.69
COL17A1-206ENST00000483876 RBFOX2O43251 390 aaKnown RBP eCLIP4.47□□□□□ -1.69
COL17A1-206ENST00000483876 NDUFB3O43676 98 aa4.47□□□□□ -1.69
COL17A1-206ENST00000483876 TSC22D2O75157 780 aa4.47□□□□□ -1.69
COL17A1-206ENST00000483876 ATP6V1G1O75348 118 aa4.47□□□□□ -1.69
COL17A1-206ENST00000483876 LY86O95711 162 aa4.47□□□□□ -1.69
COL17A1-206ENST00000483876 CYB5R3P00387 301 aaPredicted RBP4.47□□□□□ -1.69
COL17A1-206ENST00000483876 MBPP02686 304 aaPredicted RBP4.47□□□□□ -1.69
COL17A1-206ENST00000483876 GAPDHP04406 335 aaKnown RBP4.47□□□□□ -1.69
COL17A1-206ENST00000483876 HKR1P10072 659 aa4.47□□□□□ -1.69
COL17A1-206ENST00000483876 PVALBP20472 110 aaPredicted RBP4.47□□□□□ -1.69
COL17A1-206ENST00000483876 TAS2R30P59541 319 aa4.47□□□□□ -1.69
COL17A1-206ENST00000483876 UBA52P62987 128 aaKnown RBP4.47□□□□□ -1.69
COL17A1-206ENST00000483876 CATR1Q13166 79 aa4.47□□□□□ -1.69
COL17A1-206ENST00000483876 EXOSC2Q13868 293 aaKnown RBP4.47□□□□□ -1.69
COL17A1-206ENST00000483876 GNMTQ14749 295 aa4.47□□□□□ -1.69
COL17A1-206ENST00000483876 C17orf58Q2M2W7 97 aa4.47□□□□□ -1.69
COL17A1-206ENST00000483876 HFEQ30201 348 aa4.47□□□□□ -1.69
COL17A1-206ENST00000483876 ZNF585BQ52M93 769 aa4.47□□□□□ -1.69
COL17A1-206ENST00000483876 THOC7Q6I9Y2 204 aaKnown RBP4.47□□□□□ -1.69
COL17A1-206ENST00000483876 EIF5AL1Q6IS14 154 aaKnown RBP4.47□□□□□ -1.69
COL17A1-206ENST00000483876 C5orf24Q7Z6I8 188 aa4.47□□□□□ -1.69
COL17A1-206ENST00000483876 DRAM1Q8N682 238 aa4.47□□□□□ -1.69
COL17A1-206ENST00000483876 BOLLQ8N9W6 283 aaKnown RBP4.47□□□□□ -1.69
COL17A1-206ENST00000483876 OR1S1Q8NH92 325 aa4.47□□□□□ -1.69
COL17A1-206ENST00000483876 LHFPL5Q8TAF8 219 aa4.47□□□□□ -1.69
COL17A1-206ENST00000483876 NEU4Q8WWR8 484 aaPredicted RBP4.47□□□□□ -1.69
COL17A1-206ENST00000483876 DCUN1D4Q92564 292 aa4.47□□□□□ -1.69
COL17A1-206ENST00000483876 CCL17Q92583 94 aa4.47□□□□□ -1.69
COL17A1-206ENST00000483876 RAB39BQ96DA2 213 aa4.47□□□□□ -1.69
COL17A1-206ENST00000483876 FAM210AQ96ND0 272 aa4.47□□□□□ -1.69
COL17A1-206ENST00000483876 CCL13Q99616 98 aa4.47□□□□□ -1.69
COL17A1-206ENST00000483876 ARPC5LQ9BPX5 153 aa4.47□□□□□ -1.69
COL17A1-206ENST00000483876 RAB1BQ9H0U4 201 aa4.47□□□□□ -1.69
COL17A1-206ENST00000483876 SLC25A32Q9H2D1 315 aa4.47□□□□□ -1.69
COL17A1-206ENST00000483876 GAL3ST2Q9H3Q3 398 aa4.47□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms