RNA–Protein interactions for RNA: ENST00000483851.6

SHOX2-204, Transcript of short stature homeobox 2, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SHOX2, Length 1,866 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-204ENST00000483851 SMCO1Q147U7 214 aa21.68■■□□□ 1.06
SHOX2-204ENST00000483851 NMSQ5H8A3 153 aa21.68■■□□□ 1.06
SHOX2-204ENST00000483851 ABHD14BQ96IU4 210 aa21.68■■□□□ 1.06
SHOX2-204ENST00000483851 RNF150Q9ULK6 438 aa21.68■■□□□ 1.06
SHOX2-204ENST00000483851 MBPP02686 304 aaPredicted RBP21.67■■□□□ 1.06
SHOX2-204ENST00000483851 STPG2Q8N412 459 aa21.67■■□□□ 1.06
SHOX2-204ENST00000483851 LSM10Q969L4 123 aaKnown RBP21.67■■□□□ 1.06
SHOX2-204ENST00000483851 PSG11Q9UQ72 335 aa21.67■■□□□ 1.06
SHOX2-204ENST00000483851 RELNP78509 3460 aa21.67■■□□□ 1.06
SHOX2-204ENST00000483851 RPL12P30050 165 aaKnown RBP21.66■■□□□ 1.06
SHOX2-204ENST00000483851 FAM53AQ6NSI3 398 aaPredicted RBP21.66■■□□□ 1.06
SHOX2-204ENST00000483851 LYPD2Q6UXB3 125 aa21.66■■□□□ 1.06
SHOX2-204ENST00000483851 MEX3AA1L020 520 aaKnown RBP21.66■■□□□ 1.06
SHOX2-204ENST00000483851 A6NNC1 897 aa21.66■■□□□ 1.06
SHOX2-204ENST00000483851 GPR37O15354 613 aa21.66■■□□□ 1.06
SHOX2-204ENST00000483851 IGHV2-70P01814 119 aa21.66■■□□□ 1.06
SHOX2-204ENST00000483851 OR4D5Q8NGN0 318 aa21.66■■□□□ 1.06
SHOX2-204ENST00000483851 BBC3Q96PG8 261 aaPredicted RBP21.66■■□□□ 1.06
SHOX2-204ENST00000483851 TMA7Q9Y2S6 64 aaKnown RBP21.66■■□□□ 1.06
SHOX2-204ENST00000483851 K7EPK0 472 aa21.65■■□□□ 1.06
SHOX2-204ENST00000483851 DVL1O14640 695 aa21.65■■□□□ 1.06
SHOX2-204ENST00000483851 ST8SIA5O15466 376 aa21.65■■□□□ 1.06
SHOX2-204ENST00000483851 GPR12P47775 334 aa21.65■■□□□ 1.06
SHOX2-204ENST00000483851 LTC4SQ16873 150 aa21.65■■□□□ 1.06
SHOX2-204ENST00000483851 FOXRED2Q8IWF2 684 aa21.65■■□□□ 1.06
SHOX2-204ENST00000483851 FAM71E2Q8N5Q1 922 aa21.65■■□□□ 1.06
SHOX2-204ENST00000483851 ZNF436-AS1Q8NC38 126 aaPredicted RBP21.65■■□□□ 1.06
SHOX2-204ENST00000483851 OR1S2Q8NGQ3 325 aa21.65■■□□□ 1.06
SHOX2-204ENST00000483851 TMED6Q8WW62 240 aa21.65■■□□□ 1.06
SHOX2-204ENST00000483851 CTSZQ9UBR2 303 aa21.65■■□□□ 1.06
SHOX2-204ENST00000483851 Q3ZCU0 254 aa21.64■■□□□ 1.06
SHOX2-204ENST00000483851 ZNF585BQ52M93 769 aa21.64■■□□□ 1.06
SHOX2-204ENST00000483851 RNF141Q8WVD5 230 aa21.64■■□□□ 1.06
SHOX2-204ENST00000483851 PLEKHA2Q9HB19 425 aa21.64■■□□□ 1.06
SHOX2-204ENST00000483851 C19orf12Q9NSK7 152 aa21.64■■□□□ 1.06
SHOX2-204ENST00000483851 RPUSD1Q9UJJ7 312 aaKnown RBP21.64■■□□□ 1.06
SHOX2-204ENST00000483851 CFAP46Q8IYW2 2715 aa21.64■■□□□ 1.05
SHOX2-204ENST00000483851 TRBV23-1A0A0A0MS06 115 aa21.64■■□□□ 1.05
SHOX2-204ENST00000483851 A0A1W2PPR1 153 aa21.64■■□□□ 1.05
SHOX2-204ENST00000483851 ST8SIA3O43173 380 aa21.64■■□□□ 1.05
SHOX2-204ENST00000483851 OMGP23515 440 aa21.64■■□□□ 1.05
SHOX2-204ENST00000483851 RPL7L1Q6DKI1 246 aaKnown RBP21.64■■□□□ 1.05
SHOX2-204ENST00000483851 ZNF843Q8N446 348 aa21.64■■□□□ 1.05
SHOX2-204ENST00000483851 MARC2Q969Z3 335 aa21.64■■□□□ 1.05
SHOX2-204ENST00000483851 C5orf30Q96GV9 206 aa21.64■■□□□ 1.05
SHOX2-204ENST00000483851 ZNF714Q96N38 554 aa21.64■■□□□ 1.05
SHOX2-204ENST00000483851 LSM5Q9Y4Y9 91 aaKnown RBP21.64■■□□□ 1.05
SHOX2-204ENST00000483851 A0A1B0GU03 582 aa21.63■■□□□ 1.05
SHOX2-204ENST00000483851 RAB19A4D1S5 217 aa21.63■■□□□ 1.05
SHOX2-204ENST00000483851 E5RGE8 158 aa21.63■■□□□ 1.05
SHOX2-204ENST00000483851 FCN3O75636 299 aa21.63■■□□□ 1.05
SHOX2-204ENST00000483851 ATG12O94817 140 aa21.63■■□□□ 1.05
SHOX2-204ENST00000483851 CLDN1O95832 211 aa21.63■■□□□ 1.05
SHOX2-204ENST00000483851 GAPDHP04406 335 aaKnown RBP21.63■■□□□ 1.05
SHOX2-204ENST00000483851 EIF5AP63241 154 aaKnown RBP21.63■■□□□ 1.05
SHOX2-204ENST00000483851 HEPN1Q6WQI6 88 aa21.63■■□□□ 1.05
SHOX2-204ENST00000483851 CD300LFQ8TDQ1 290 aa21.63■■□□□ 1.05
SHOX2-204ENST00000483851 RAB39BQ96DA2 213 aa21.63■■□□□ 1.05
SHOX2-204ENST00000483851 TIMD4Q96H15 378 aa21.63■■□□□ 1.05
SHOX2-204ENST00000483851 ABHD14AQ9BUJ0 271 aa21.63■■□□□ 1.05
SHOX2-204ENST00000483851 NSG2Q9Y328 171 aa21.63■■□□□ 1.05
SHOX2-204ENST00000483851 KLF2Q9Y5W3 355 aaPredicted RBP21.63■■□□□ 1.05
SHOX2-204ENST00000483851 ZNF16P17020 682 aaPredicted RBP21.62■■□□□ 1.05
SHOX2-204ENST00000483851 TMEM200BQ69YZ2 307 aa21.62■■□□□ 1.05
SHOX2-204ENST00000483851 UQCC3Q6UW78 93 aa21.62■■□□□ 1.05
SHOX2-204ENST00000483851 FGFRL1Q8N441 504 aa21.62■■□□□ 1.05
SHOX2-204ENST00000483851 RAB1CQ92928 201 aa21.62■■□□□ 1.05
SHOX2-204ENST00000483851 IFI27L2Q9H2X8 130 aa21.62■■□□□ 1.05
SHOX2-204ENST00000483851 LAMP3Q9UQV4 416 aa21.62■■□□□ 1.05
SHOX2-204ENST00000483851 POMT1Q9Y6A1 747 aa21.62■■□□□ 1.05
SHOX2-204ENST00000483851 TMEM155Q4W5P6 130 aa21.62■■□□□ 1.05
SHOX2-204ENST00000483851 ZNF439Q8NDP4 499 aa21.62■■□□□ 1.05
SHOX2-204ENST00000483851 LYNX1G3V0Z9 82 aa21.61■■□□□ 1.05
SHOX2-204ENST00000483851 LYNX1P0DP58 116 aa21.61■■□□□ 1.05
SHOX2-204ENST00000483851 DAOP14920 347 aa21.61■■□□□ 1.05
SHOX2-204ENST00000483851 ZNF134P52741 427 aa21.61■■□□□ 1.05
SHOX2-204ENST00000483851 ZNF273Q14593 569 aa21.61■■□□□ 1.05
SHOX2-204ENST00000483851 FBXL17Q9UF56 701 aa21.61■■□□□ 1.05
SHOX2-204ENST00000483851 IGKV1-39P01597 117 aa21.6■■□□□ 1.05
SHOX2-204ENST00000483851 IGKV1D-39P04432 117 aa21.6■■□□□ 1.05
SHOX2-204ENST00000483851 TMEM33P57088 247 aa21.6■■□□□ 1.05
SHOX2-204ENST00000483851 RPL30P62888 115 aaKnown RBP21.6■■□□□ 1.05
SHOX2-204ENST00000483851 TCTEX1D2Q8WW35 142 aa21.6■■□□□ 1.05
SHOX2-204ENST00000483851 H1FXQ92522 213 aaKnown RBP21.6■■□□□ 1.05
SHOX2-204ENST00000483851 C11orf1Q9H5F2 150 aa21.6■■□□□ 1.05
SHOX2-204ENST00000483851 MIOXQ9UGB7 285 aa21.6■■□□□ 1.05
SHOX2-204ENST00000483851 SCGB1D2O95969 90 aa21.6■■□□□ 1.05
SHOX2-204ENST00000483851 NKX2-1P43699 371 aaPredicted RBP21.6■■□□□ 1.05
SHOX2-204ENST00000483851 CT45A1Q5HYN5 189 aa21.6■■□□□ 1.05
SHOX2-204ENST00000483851 BPIFCQ8NFQ6 507 aa21.6■■□□□ 1.05
SHOX2-204ENST00000483851 CT45A3Q8NHU0 189 aa21.6■■□□□ 1.05
SHOX2-204ENST00000483851 ARV1Q9H2C2 271 aa21.6■■□□□ 1.05
SHOX2-204ENST00000483851 CHODLQ9H9P2 273 aa21.6■■□□□ 1.05
SHOX2-204ENST00000483851 RALYQ9UKM9 306 aaKnown RBP21.6■■□□□ 1.05
SHOX2-204ENST00000483851 NUDT19A8MXV4 375 aa21.59■■□□□ 1.05
SHOX2-204ENST00000483851 RAB29O14966 203 aa21.59■■□□□ 1.05
SHOX2-204ENST00000483851 DUTP33316 252 aaKnown RBP21.59■■□□□ 1.05
SHOX2-204ENST00000483851 LPAR6P43657 344 aa21.59■■□□□ 1.05
SHOX2-204ENST00000483851 DMBX1Q8NFW5 382 aa21.59■■□□□ 1.05
SHOX2-204ENST00000483851 SAT2Q96F10 170 aaPredicted RBP21.59■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms