RNA–Protein interactions for RNA: ENST00000483407.1

CSDE1-207, Transcript of cold shock domain containing E1, humanhuman

TSL 2

Gene CSDE1, Length 741 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-207ENST00000483407 FRMD6-AS1P0C7T7 363 aa4.54□□□□□ -1.68
CSDE1-207ENST00000483407 GP9P14770 177 aa4.54□□□□□ -1.68
CSDE1-207ENST00000483407 SPNP16150 400 aa4.54□□□□□ -1.68
CSDE1-207ENST00000483407 BDKRB2P30411 391 aa4.54□□□□□ -1.68
CSDE1-207ENST00000483407 RAB9AP51151 201 aa4.54□□□□□ -1.68
CSDE1-207ENST00000483407 GNB1P62873 340 aa4.54□□□□□ -1.68
CSDE1-207ENST00000483407 RAB40BQ12829 278 aa4.54□□□□□ -1.68
CSDE1-207ENST00000483407 SLC22A6Q4U2R8 563 aa4.54□□□□□ -1.68
CSDE1-207ENST00000483407 CCDC58Q4VC31 144 aa4.54□□□□□ -1.68
CSDE1-207ENST00000483407 CT45A1Q5HYN5 189 aa4.54□□□□□ -1.68
CSDE1-207ENST00000483407 SYT6Q5T7P8 510 aaPredicted RBP4.54□□□□□ -1.68
CSDE1-207ENST00000483407 DDI2Q5TDH0 399 aa4.54□□□□□ -1.68
CSDE1-207ENST00000483407 ZNF497Q6ZNH5 498 aa4.54□□□□□ -1.68
CSDE1-207ENST00000483407 ZNF439Q8NDP4 499 aa4.54□□□□□ -1.68
CSDE1-207ENST00000483407 OR10V1Q8NGI7 309 aa4.54□□□□□ -1.68
CSDE1-207ENST00000483407 CT45A3Q8NHU0 189 aa4.54□□□□□ -1.68
CSDE1-207ENST00000483407 OR4C12Q96R67 309 aa4.54□□□□□ -1.68
CSDE1-207ENST00000483407 TM2D2Q9BX73 214 aa4.54□□□□□ -1.68
CSDE1-207ENST00000483407 KLK15Q9H2R5 256 aa4.54□□□□□ -1.68
CSDE1-207ENST00000483407 OR2S2Q9NQN1 319 aa4.54□□□□□ -1.68
CSDE1-207ENST00000483407 PARP11Q9NR21 331 aa4.54□□□□□ -1.68
CSDE1-207ENST00000483407 KCNIP1Q9NZI2 227 aa4.54□□□□□ -1.68
CSDE1-207ENST00000483407 ZNF581Q9P0T4 197 aa4.54□□□□□ -1.68
CSDE1-207ENST00000483407 KIAA1456Q9P272 454 aa4.54□□□□□ -1.68
CSDE1-207ENST00000483407 CKLFQ9UBR5 152 aa4.54□□□□□ -1.68
CSDE1-207ENST00000483407 HSPB7Q9UBY9 170 aa4.54□□□□□ -1.68
CSDE1-207ENST00000483407 MRPS28Q9Y2Q9 187 aaKnown RBP4.54□□□□□ -1.68
CSDE1-207ENST00000483407 GMPPBQ9Y5P6 360 aa4.54□□□□□ -1.68
CSDE1-207ENST00000483407 DNAH9Q9NYC9 4486 aa4.54□□□□□ -1.68
CSDE1-207ENST00000483407 IGHV7-81A0A0B4J1V7 117 aa4.53□□□□□ -1.68
CSDE1-207ENST00000483407 A0A1W2PN81 502 aa4.53□□□□□ -1.68
CSDE1-207ENST00000483407 FAM90A10PA6NDY2 464 aa4.53□□□□□ -1.68
CSDE1-207ENST00000483407 LINC01619G3V211 115 aa4.53□□□□□ -1.68
CSDE1-207ENST00000483407 G3V318 75 aa4.53□□□□□ -1.68
CSDE1-207ENST00000483407 EI24O14681 340 aa4.53□□□□□ -1.68
CSDE1-207ENST00000483407 ARPC1BO15143 372 aaKnown RBP4.53□□□□□ -1.68
CSDE1-207ENST00000483407 LDLRAD4O15165 306 aa4.53□□□□□ -1.68
CSDE1-207ENST00000483407 NBR2O15453 112 aa4.53□□□□□ -1.68
CSDE1-207ENST00000483407 ATP5HO75947 161 aa4.53□□□□□ -1.68
CSDE1-207ENST00000483407 RGS11O94810 467 aa4.53□□□□□ -1.68
CSDE1-207ENST00000483407 HBZP02008 142 aa4.53□□□□□ -1.68
CSDE1-207ENST00000483407 OR8U9P0C7N5 309 aa4.53□□□□□ -1.68
CSDE1-207ENST00000483407 CD40LGP29965 261 aa4.53□□□□□ -1.68
CSDE1-207ENST00000483407 CHRNA7P36544 502 aa4.53□□□□□ -1.68
CSDE1-207ENST00000483407 VHLP40337 213 aa4.53□□□□□ -1.68
CSDE1-207ENST00000483407 ALDH3A2P51648 485 aa4.53□□□□□ -1.68
CSDE1-207ENST00000483407 GTF2A1P52655 376 aaPredicted RBP4.53□□□□□ -1.68
CSDE1-207ENST00000483407 ACTBP60709 375 aa4.53□□□□□ -1.68
CSDE1-207ENST00000483407 PITPNAQ00169 270 aa4.53□□□□□ -1.68
CSDE1-207ENST00000483407 RIPK1Q13546 671 aa4.53□□□□□ -1.68
CSDE1-207ENST00000483407 KIAA0141Q14154 515 aaPredicted RBP4.53□□□□□ -1.68
CSDE1-207ENST00000483407 ECSCRQ19T08 205 aa4.53□□□□□ -1.68
CSDE1-207ENST00000483407 ASPHD1Q5U4P2 390 aa4.53□□□□□ -1.68
CSDE1-207ENST00000483407 PYHIN1Q6K0P9 492 aa4.53□□□□□ -1.68
CSDE1-207ENST00000483407 FAM53AQ6NSI3 398 aaPredicted RBP4.53□□□□□ -1.68
CSDE1-207ENST00000483407 RPL22L1Q6P5R6 122 aaKnown RBP4.53□□□□□ -1.68
CSDE1-207ENST00000483407 TMPRSS11AQ6ZMR5 421 aa4.53□□□□□ -1.68
CSDE1-207ENST00000483407 ZNF554Q86TJ5 538 aa4.53□□□□□ -1.68
CSDE1-207ENST00000483407 TCTEX1D1Q8N7M0 179 aa4.53□□□□□ -1.68
CSDE1-207ENST00000483407 OR4K15Q8NH41 348 aa4.53□□□□□ -1.68
CSDE1-207ENST00000483407 DLX4Q92988 240 aaPredicted RBP4.53□□□□□ -1.68
CSDE1-207ENST00000483407 ISOC1Q96CN7 298 aa4.53□□□□□ -1.68
CSDE1-207ENST00000483407 FLYWCH2Q96CP2 140 aaKnown RBP4.53□□□□□ -1.68
CSDE1-207ENST00000483407 MRPS24Q96EL2 167 aaKnown RBP4.53□□□□□ -1.68
CSDE1-207ENST00000483407 ZNF184Q99676 751 aaPredicted RBP4.53□□□□□ -1.68
CSDE1-207ENST00000483407 ANKRD60Q9BZ19 345 aa4.53□□□□□ -1.68
CSDE1-207ENST00000483407 CST11Q9H112 138 aa4.53□□□□□ -1.68
CSDE1-207ENST00000483407 AMBNQ9NP70 447 aa4.53□□□□□ -1.68
CSDE1-207ENST00000483407 RCC2Q9P258 522 aaKnown RBP4.53□□□□□ -1.68
CSDE1-207ENST00000483407 JPT1Q9UK76 154 aa4.53□□□□□ -1.68
CSDE1-207ENST00000483407 RNF150Q9ULK6 438 aa4.53□□□□□ -1.68
CSDE1-207ENST00000483407 FOXA2Q9Y261 457 aaPredicted RBP4.53□□□□□ -1.68
CSDE1-207ENST00000483407 RPL36Q9Y3U8 105 aaKnown RBP4.53□□□□□ -1.68
CSDE1-207ENST00000483407 PEX16Q9Y5Y5 336 aa4.53□□□□□ -1.68
CSDE1-207ENST00000483407 HERC2O95714 4834 aa4.52□□□□□ -1.69
CSDE1-207ENST00000483407 A0A1W2PP11 408 aa4.52□□□□□ -1.69
CSDE1-207ENST00000483407 GLAP06280 429 aa4.52□□□□□ -1.69
CSDE1-207ENST00000483407 LGALS1P09382 135 aaKnown RBP4.52□□□□□ -1.69
CSDE1-207ENST00000483407 GABRB1P18505 474 aa4.52□□□□□ -1.69
CSDE1-207ENST00000483407 RCC1P18754 421 aaPredicted RBP4.52□□□□□ -1.69
CSDE1-207ENST00000483407 BLVRBP30043 206 aaPredicted RBP4.52□□□□□ -1.69
CSDE1-207ENST00000483407 TMEM267Q0VDI3 215 aaPredicted RBP4.52□□□□□ -1.69
CSDE1-207ENST00000483407 PLGLAQ15195 96 aa4.52□□□□□ -1.69
CSDE1-207ENST00000483407 SRSF7Q16629 238 aaKnown RBP eCLIP4.52□□□□□ -1.69
CSDE1-207ENST00000483407 C5orf64Q2M2E5 130 aa4.52□□□□□ -1.69
CSDE1-207ENST00000483407 MORN2Q502X0 79 aa4.52□□□□□ -1.69
CSDE1-207ENST00000483407 ZNF660Q6AZW8 331 aaPredicted RBP4.52□□□□□ -1.69
CSDE1-207ENST00000483407 AWAT2Q6E213 333 aa4.52□□□□□ -1.69
CSDE1-207ENST00000483407 SUMO4Q6EEV6 95 aa4.52□□□□□ -1.69
CSDE1-207ENST00000483407 ZFAND6Q6FIF0 208 aa4.52□□□□□ -1.69
CSDE1-207ENST00000483407 RAB12Q6IQ22 244 aa4.52□□□□□ -1.69
CSDE1-207ENST00000483407 GLIPR1L1Q6UWM5 242 aa4.52□□□□□ -1.69
CSDE1-207ENST00000483407 LYPD6Q86Y78 171 aa4.52□□□□□ -1.69
CSDE1-207ENST00000483407 SGPP2Q8IWX5 399 aa4.52□□□□□ -1.69
CSDE1-207ENST00000483407 JAGN1Q8N5M9 183 aa4.52□□□□□ -1.69
CSDE1-207ENST00000483407 TMEM217Q8N7C4 229 aa4.52□□□□□ -1.69
CSDE1-207ENST00000483407 MINDY2Q8NBR6 621 aa4.52□□□□□ -1.69
CSDE1-207ENST00000483407 OR52I1Q8NGK6 324 aa4.52□□□□□ -1.69
CSDE1-207ENST00000483407 OR1L1Q8NH94 360 aa4.52□□□□□ -1.69
CSDE1-207ENST00000483407 RHOXF1Q8NHV9 184 aa4.52□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms