RNA–Protein interactions for RNA: ENST00000483338.1

COL4A5-205, Transcript of collagen type IV alpha 5 chain, humanhuman

TSL 1 (best)

Gene COL4A5, Length 3,622 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-205ENST00000483338 TBR1Q16650 682 aa6.66□□□□□ -1.34
COL4A5-205ENST00000483338 ASTLQ6HA08 431 aaPredicted RBP6.66□□□□□ -1.34
COL4A5-205ENST00000483338 OR4N5Q8IXE1 308 aa6.66□□□□□ -1.34
COL4A5-205ENST00000483338 OR4N2Q8NGD1 307 aa6.66□□□□□ -1.34
COL4A5-205ENST00000483338 OR2K2Q8NGT1 345 aa6.66□□□□□ -1.34
COL4A5-205ENST00000483338 OR10G6Q8NH81 332 aa6.66□□□□□ -1.34
COL4A5-205ENST00000483338 COMMD5Q9GZQ3 224 aa6.66□□□□□ -1.34
COL4A5-205ENST00000483338 GP6Q9HCN6 339 aa6.66□□□□□ -1.34
COL4A5-205ENST00000483338 NXT1Q9UKK6 140 aaKnown RBP6.66□□□□□ -1.34
COL4A5-205ENST00000483338 TMEM189A5PLL7 270 aa6.66□□□□□ -1.34
COL4A5-205ENST00000483338 C9orf118A6NHY6 69 aa6.66□□□□□ -1.34
COL4A5-205ENST00000483338 H3BUT2 72 aa6.66□□□□□ -1.34
COL4A5-205ENST00000483338 IGKV1D-33P01593 117 aa6.66□□□□□ -1.34
COL4A5-205ENST00000483338 IGKV1-33P01594 117 aa6.66□□□□□ -1.34
COL4A5-205ENST00000483338 FTH1P19P0C7X4 201 aa6.66□□□□□ -1.34
COL4A5-205ENST00000483338 HNRNPA2B1P22626 353 aaKnown RBP6.66□□□□□ -1.34
COL4A5-205ENST00000483338 ZNF90Q03938 601 aa6.66□□□□□ -1.34
COL4A5-205ENST00000483338 FOXE3Q13461 319 aa6.66□□□□□ -1.34
COL4A5-205ENST00000483338 PLCXD3Q63HM9 321 aa6.66□□□□□ -1.34
COL4A5-205ENST00000483338 SLC23A3Q6PIS1 610 aa6.66□□□□□ -1.34
COL4A5-205ENST00000483338 SLC25A34Q6PIV7 304 aa6.66□□□□□ -1.34
COL4A5-205ENST00000483338 MTURNQ8N3F0 131 aa6.66□□□□□ -1.34
COL4A5-205ENST00000483338 RPP25LQ8N5L8 163 aaKnown RBP6.66□□□□□ -1.34
COL4A5-205ENST00000483338 NEU4Q8WWR8 484 aaPredicted RBP6.66□□□□□ -1.34
COL4A5-205ENST00000483338 RNF183Q96D59 192 aa6.66□□□□□ -1.34
COL4A5-205ENST00000483338 SFXN3Q9BWM7 321 aa6.66□□□□□ -1.34
COL4A5-205ENST00000483338 VN1R3Q9BXE9 311 aa6.66□□□□□ -1.34
COL4A5-205ENST00000483338 METTL7AQ9H8H3 244 aa6.66□□□□□ -1.34
COL4A5-205ENST00000483338 R4GMQ9 66 aa6.66□□□□□ -1.34
COL4A5-205ENST00000483338 MYO7BQ6PIF6 2116 aa6.66□□□□□ -1.34
COL4A5-205ENST00000483338 LAMA2P24043 3122 aaKnown RBP6.66□□□□□ -1.34
COL4A5-205ENST00000483338 ADH4P08319 380 aa6.65□□□□□ -1.34
COL4A5-205ENST00000483338 NPBWR2P48146 333 aa6.65□□□□□ -1.34
COL4A5-205ENST00000483338 PAX9P55771 341 aa6.65□□□□□ -1.34
COL4A5-205ENST00000483338 DCAF12Q5T6F0 453 aa6.65□□□□□ -1.34
COL4A5-205ENST00000483338 CRIPAKQ8N1N5 446 aa6.65□□□□□ -1.34
COL4A5-205ENST00000483338 RAB42Q8N4Z0 105 aa6.65□□□□□ -1.34
COL4A5-205ENST00000483338 NEIL1Q96FI4 390 aaPredicted RBP6.65□□□□□ -1.34
COL4A5-205ENST00000483338 MMP25Q9NPA2 562 aa6.65□□□□□ -1.34
COL4A5-205ENST00000483338 SLC39A9Q9NUM3 307 aa6.65□□□□□ -1.34
COL4A5-205ENST00000483338 MCTS1Q9ULC4 181 aaKnown RBP6.65□□□□□ -1.34
COL4A5-205ENST00000483338 H3BP45 60 aa6.65□□□□□ -1.34
COL4A5-205ENST00000483338 CHST1O43916 411 aa6.65□□□□□ -1.34
COL4A5-205ENST00000483338 OTX2P32243 289 aa6.65□□□□□ -1.34
COL4A5-205ENST00000483338 GPM6AP51674 278 aa6.65□□□□□ -1.34
COL4A5-205ENST00000483338 FXYD4P59646 89 aa6.65□□□□□ -1.34
COL4A5-205ENST00000483338 SMIM20Q8N5G0 67 aa6.65□□□□□ -1.34
COL4A5-205ENST00000483338 OR10G8Q8NGN5 311 aa6.65□□□□□ -1.34
COL4A5-205ENST00000483338 SSC4DQ8WTU2 575 aa6.65□□□□□ -1.34
COL4A5-205ENST00000483338 MBD6Q96DN6 1003 aa6.65□□□□□ -1.34
COL4A5-205ENST00000483338 HDHD3Q9BSH5 251 aaPredicted RBP6.65□□□□□ -1.34
COL4A5-205ENST00000483338 TMEM140Q9NV12 185 aa6.65□□□□□ -1.34
COL4A5-205ENST00000483338 MRPL16Q9NX20 251 aaKnown RBP6.65□□□□□ -1.34
COL4A5-205ENST00000483338 CRIM1Q9NZV1 1036 aa6.65□□□□□ -1.34
COL4A5-205ENST00000483338 BOKQ9UMX3 212 aaPredicted RBP6.65□□□□□ -1.34
COL4A5-205ENST00000483338 IGKV1D-42A0A075B6H8 117 aa6.65□□□□□ -1.35
COL4A5-205ENST00000483338 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP6.65□□□□□ -1.35
COL4A5-205ENST00000483338 TMPRSS2O15393 492 aa6.65□□□□□ -1.35
COL4A5-205ENST00000483338 ADH5P11766 374 aa6.65□□□□□ -1.35
COL4A5-205ENST00000483338 IGFBP2P18065 325 aa6.65□□□□□ -1.35
COL4A5-205ENST00000483338 FAM53BQ14153 422 aa6.65□□□□□ -1.35
COL4A5-205ENST00000483338 KCTD18Q6PI47 426 aaPredicted RBP6.65□□□□□ -1.35
COL4A5-205ENST00000483338 OR8B3Q8NGG8 313 aa6.65□□□□□ -1.35
COL4A5-205ENST00000483338 DPF1Q92782 380 aa6.65□□□□□ -1.35
COL4A5-205ENST00000483338 OR8B2Q96RD0 313 aa6.65□□□□□ -1.35
COL4A5-205ENST00000483338 ULBP2Q9BZM5 246 aa6.65□□□□□ -1.35
COL4A5-205ENST00000483338 FOXQ1Q9C009 403 aa6.65□□□□□ -1.35
COL4A5-205ENST00000483338 SERTAD4Q9NUC0 356 aa6.65□□□□□ -1.35
COL4A5-205ENST00000483338 CCL26Q9Y258 94 aa6.65□□□□□ -1.35
COL4A5-205ENST00000483338 NCOA6Q14686 2063 aaPredicted RBP6.65□□□□□ -1.35
COL4A5-205ENST00000483338 RP1P56715 2156 aa6.65□□□□□ -1.35
COL4A5-205ENST00000483338 hDV102S1A0JD36 115 aa6.64□□□□□ -1.35
COL4A5-205ENST00000483338 FAM181BA6NEQ2 426 aa6.64□□□□□ -1.35
COL4A5-205ENST00000483338 ANKRD30BLA7E2S9 258 aa6.64□□□□□ -1.35
COL4A5-205ENST00000483338 PAGE4O60829 102 aa6.64□□□□□ -1.35
COL4A5-205ENST00000483338 RENP00797 406 aa6.64□□□□□ -1.35
COL4A5-205ENST00000483338 THBS3P49746 956 aa6.64□□□□□ -1.35
COL4A5-205ENST00000483338 RPL32P62910 135 aaKnown RBP6.64□□□□□ -1.35
COL4A5-205ENST00000483338 SSBP2P81877 361 aaPredicted RBP6.64□□□□□ -1.35
COL4A5-205ENST00000483338 HIST1H1AQ02539 215 aaPredicted RBP6.64□□□□□ -1.35
COL4A5-205ENST00000483338 ACKR1Q16570 336 aa6.64□□□□□ -1.35
COL4A5-205ENST00000483338 Q6ZSR6 202 aa6.64□□□□□ -1.35
COL4A5-205ENST00000483338 CITED1Q99966 193 aa6.64□□□□□ -1.35
COL4A5-205ENST00000483338 OBSL1O75147 1896 aa6.64□□□□□ -1.35
COL4A5-205ENST00000483338 SLC22A20A6NK97 555 aa6.64□□□□□ -1.35
COL4A5-205ENST00000483338 FOXI3A8MTJ6 420 aaPredicted RBP6.64□□□□□ -1.35
COL4A5-205ENST00000483338 SHISA8B8ZZ34 492 aa6.64□□□□□ -1.35
COL4A5-205ENST00000483338 CEBPBP17676 345 aa6.64□□□□□ -1.35
COL4A5-205ENST00000483338 PNPLA5Q7Z6Z6 429 aaPredicted RBP6.64□□□□□ -1.35
COL4A5-205ENST00000483338 KIR3DL3Q8N743 410 aa6.64□□□□□ -1.35
COL4A5-205ENST00000483338 OR51T1Q8NGJ9 327 aa6.64□□□□□ -1.35
COL4A5-205ENST00000483338 OR10AG1Q8NH19 301 aa6.64□□□□□ -1.35
COL4A5-205ENST00000483338 SCGB1C1Q8TD33 95 aa6.64□□□□□ -1.35
COL4A5-205ENST00000483338 AP1S3Q96PC3 154 aa6.64□□□□□ -1.35
COL4A5-205ENST00000483338 OR10A2Q9H208 303 aa6.64□□□□□ -1.35
COL4A5-205ENST00000483338 FGF21Q9NSA1 209 aa6.64□□□□□ -1.35
COL4A5-205ENST00000483338 ZNF835Q9Y2P0 537 aa6.64□□□□□ -1.35
COL4A5-205ENST00000483338 TRBV20OR9-2A0A075B6H5 130 aa6.64□□□□□ -1.35
COL4A5-205ENST00000483338 C2orf70A6NJV1 201 aa6.64□□□□□ -1.35
COL4A5-205ENST00000483338 H0Y8G0 127 aa6.64□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms