RNA–Protein interactions for RNA: ENST00000482996.5

VARS-225, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 728 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-225ENST00000482996 PNLIPRP3Q17RR3 467 aa10.94□□□□□ -0.66
VARS-225ENST00000482996 BEAN1Q3B7T3 259 aa10.94□□□□□ -0.66
VARS-225ENST00000482996 RPL39P5Q59GN2 51 aa10.94□□□□□ -0.66
VARS-225ENST00000482996 FAM131AQ6UXB0 335 aa10.94□□□□□ -0.66
VARS-225ENST00000482996 AGMATQ9BSE5 352 aa10.94□□□□□ -0.66
VARS-225ENST00000482996 CENPOQ9BU64 300 aa10.94□□□□□ -0.66
VARS-225ENST00000482996 NAA50Q9GZZ1 169 aaKnown RBP10.94□□□□□ -0.66
VARS-225ENST00000482996 ZNF107Q9UII5 783 aaPredicted RBP10.94□□□□□ -0.66
VARS-225ENST00000482996 DAPK2Q9UIK4 370 aa10.94□□□□□ -0.66
VARS-225ENST00000482996 IGKV1-6A0A0C4DH72 117 aa10.93□□□□□ -0.66
VARS-225ENST00000482996 H7C2Y5 167 aa10.93□□□□□ -0.66
VARS-225ENST00000482996 BET1O15155 118 aa10.93□□□□□ -0.66
VARS-225ENST00000482996 SCGNO76038 276 aa10.93□□□□□ -0.66
VARS-225ENST00000482996 CT45A6P0DMU7 189 aa10.93□□□□□ -0.66
VARS-225ENST00000482996 CT45A5P0DMU8 189 aa10.93□□□□□ -0.66
VARS-225ENST00000482996 CT45A7P0DMV0 189 aa10.93□□□□□ -0.66
VARS-225ENST00000482996 OR5H8P0DN80 308 aa10.93□□□□□ -0.66
VARS-225ENST00000482996 VBP1P61758 197 aa10.93□□□□□ -0.66
VARS-225ENST00000482996 C5orf64Q2M2E5 130 aa10.93□□□□□ -0.66
VARS-225ENST00000482996 CXorf66Q5JRM2 361 aaPredicted RBP10.93□□□□□ -0.66
VARS-225ENST00000482996 SFXN4Q6P4A7 337 aa10.93□□□□□ -0.66
VARS-225ENST00000482996 WFDC9Q8NEX5 89 aa10.93□□□□□ -0.66
VARS-225ENST00000482996 RBMXL1Q96E39 390 aaKnown RBP10.93□□□□□ -0.66
VARS-225ENST00000482996 HSPB9Q9BQS6 159 aa10.93□□□□□ -0.66
VARS-225ENST00000482996 DCSTAMPQ9H295 470 aa10.93□□□□□ -0.66
VARS-225ENST00000482996 RDH8Q9NYR8 311 aa10.93□□□□□ -0.66
VARS-225ENST00000482996 RNF150Q9ULK6 438 aa10.93□□□□□ -0.66
VARS-225ENST00000482996 RBBP9O75884 186 aa10.92□□□□□ -0.66
VARS-225ENST00000482996 DIRAS3O95661 229 aa10.92□□□□□ -0.66
VARS-225ENST00000482996 HLA-DRB1P01911 266 aa10.92□□□□□ -0.66
VARS-225ENST00000482996 IGF1P05019 195 aa10.92□□□□□ -0.66
VARS-225ENST00000482996 ELANEP08246 267 aa10.92□□□□□ -0.66
VARS-225ENST00000482996 GSTP1P09211 210 aaKnown RBP10.92□□□□□ -0.66
VARS-225ENST00000482996 CNTFRP26992 372 aa10.92□□□□□ -0.66
VARS-225ENST00000482996 SDC2P34741 201 aa10.92□□□□□ -0.66
VARS-225ENST00000482996 NCS1P62166 190 aa10.92□□□□□ -0.66
VARS-225ENST00000482996 FOXE3Q13461 319 aa10.92□□□□□ -0.66
VARS-225ENST00000482996 CNPY1Q3B7I2 92 aa10.92□□□□□ -0.66
VARS-225ENST00000482996 CDNFQ49AH0 187 aa10.92□□□□□ -0.66
VARS-225ENST00000482996 OXLD1Q5BKU9 147 aa10.92□□□□□ -0.66
VARS-225ENST00000482996 KPRPQ5T749 579 aaPredicted RBP10.92□□□□□ -0.66
VARS-225ENST00000482996 FOXB2Q5VYV0 432 aa10.92□□□□□ -0.66
VARS-225ENST00000482996 GLDNQ6ZMI3 551 aaPredicted RBP10.92□□□□□ -0.66
VARS-225ENST00000482996 NPBQ8NG41 125 aa10.92□□□□□ -0.66
VARS-225ENST00000482996 OR10J5Q8NHC4 309 aa10.92□□□□□ -0.66
VARS-225ENST00000482996 RITA1Q96K30 269 aa10.92□□□□□ -0.66
VARS-225ENST00000482996 DCUN1D5Q9BTE7 237 aa10.92□□□□□ -0.66
VARS-225ENST00000482996 CABLES2Q9BTV7 478 aa10.92□□□□□ -0.66
VARS-225ENST00000482996 ZNF580Q9UK33 172 aa10.92□□□□□ -0.66
VARS-225ENST00000482996 WASHC3Q9Y3C0 194 aa10.92□□□□□ -0.66
VARS-225ENST00000482996 H0YJW9 148 aa10.91□□□□□ -0.66
VARS-225ENST00000482996 NDUFA3O95167 84 aa10.91□□□□□ -0.66
VARS-225ENST00000482996 APOA2P02652 100 aa10.91□□□□□ -0.66
VARS-225ENST00000482996 GSTT2P0CG29 244 aa10.91□□□□□ -0.66
VARS-225ENST00000482996 GSTT2BP0CG30 244 aa10.91□□□□□ -0.66
VARS-225ENST00000482996 SNRPBP14678 240 aaKnown RBP10.91□□□□□ -0.66
VARS-225ENST00000482996 DTYMKP23919 212 aa10.91□□□□□ -0.66
VARS-225ENST00000482996 MXD1Q05195 221 aa10.91□□□□□ -0.66
VARS-225ENST00000482996 PLGLAQ15195 96 aa10.91□□□□□ -0.66
VARS-225ENST00000482996 CTF1Q16619 201 aa10.91□□□□□ -0.66
VARS-225ENST00000482996 SRSF7Q16629 238 aaKnown RBP eCLIP10.91□□□□□ -0.66
VARS-225ENST00000482996 IGSF11Q5DX21 431 aa10.91□□□□□ -0.66
VARS-225ENST00000482996 LIN54Q6MZP7 749 aa10.91□□□□□ -0.66
VARS-225ENST00000482996 ZNF695Q8IW36 515 aa10.91□□□□□ -0.66
VARS-225ENST00000482996 ZNF436-AS1Q8NC38 126 aaPredicted RBP10.91□□□□□ -0.66
VARS-225ENST00000482996 KLHL30-AS1Q8NEE0 82 aa10.91□□□□□ -0.66
VARS-225ENST00000482996 OR5AN1Q8NGI8 311 aa10.91□□□□□ -0.66
VARS-225ENST00000482996 LGALS14Q8TCE9 139 aa10.91□□□□□ -0.66
VARS-225ENST00000482996 MAFIPQ8WZ33 124 aa10.91□□□□□ -0.66
VARS-225ENST00000482996 RNF5Q99942 180 aa10.91□□□□□ -0.66
VARS-225ENST00000482996 GINS4Q9BRT9 223 aa10.91□□□□□ -0.66
VARS-225ENST00000482996 TOLLIPQ9H0E2 274 aa10.91□□□□□ -0.66
VARS-225ENST00000482996 OR51J1Q9H342 316 aa10.91□□□□□ -0.66
VARS-225ENST00000482996 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP10.91□□□□□ -0.66
VARS-225ENST00000482996 PTTG2Q9NZH5 202 aa10.91□□□□□ -0.66
VARS-225ENST00000482996 ZNF230Q9UIE0 474 aaPredicted RBP10.91□□□□□ -0.66
VARS-225ENST00000482996 PRKDCP78527 4128 aaKnown RBP10.91□□□□□ -0.66
VARS-225ENST00000482996 TRBV6-7A0A0A0MS04 114 aa10.9□□□□□ -0.66
VARS-225ENST00000482996 IGHG4P01861 327 aa10.9□□□□□ -0.66
VARS-225ENST00000482996 IGLL1P15814 213 aa10.9□□□□□ -0.66
VARS-225ENST00000482996 SCAND1P57086 179 aa10.9□□□□□ -0.66
VARS-225ENST00000482996 PITPNAQ00169 270 aa10.9□□□□□ -0.66
VARS-225ENST00000482996 Q6ZS49 121 aa10.9□□□□□ -0.66
VARS-225ENST00000482996 C8orf86Q6ZUL3 223 aa10.9□□□□□ -0.66
VARS-225ENST00000482996 REC114Q7Z4M0 266 aa10.9□□□□□ -0.66
VARS-225ENST00000482996 RCC1LQ96I51 464 aaKnown RBP10.9□□□□□ -0.66
VARS-225ENST00000482996 TSNAXQ99598 290 aaKnown RBP10.9□□□□□ -0.66
VARS-225ENST00000482996 PARP11Q9NR21 331 aa10.9□□□□□ -0.66
VARS-225ENST00000482996 RBM7Q9Y580 266 aaKnown RBP10.9□□□□□ -0.66
VARS-225ENST00000482996 ETV7Q9Y603 341 aa10.9□□□□□ -0.66
VARS-225ENST00000482996 IGHV7-81A0A0B4J1V7 117 aa10.89□□□□□ -0.67
VARS-225ENST00000482996 M0R1X1 148 aa10.89□□□□□ -0.67
VARS-225ENST00000482996 RRHO14718 337 aa10.89□□□□□ -0.67
VARS-225ENST00000482996 DUS4LO95620 317 aaKnown RBP10.89□□□□□ -0.67
VARS-225ENST00000482996 RPLP1P05386 114 aaKnown RBP10.89□□□□□ -0.67
VARS-225ENST00000482996 CLEC2LP0C7M8 214 aa10.89□□□□□ -0.67
VARS-225ENST00000482996 OR8U9P0C7N5 309 aa10.89□□□□□ -0.67
VARS-225ENST00000482996 MYCNOSP40205 109 aa10.89□□□□□ -0.67
VARS-225ENST00000482996 THBS3P49746 956 aa10.89□□□□□ -0.67
VARS-225ENST00000482996 GNG2P59768 71 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms