RNA–Protein interactions for RNA: ENST00000480127.1

COL17A1-205, Transcript of collagen type XVII alpha 1 chain, humanhuman

TSL 3

Gene COL17A1, Length 420 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-205ENST00000480127 DENRO43583 198 aaKnown RBP5.52□□□□□ -1.53
COL17A1-205ENST00000480127 SC5DO75845 299 aa5.52□□□□□ -1.53
COL17A1-205ENST00000480127 TRGV3P03979 118 aa5.52□□□□□ -1.53
COL17A1-205ENST00000480127 OR8U9P0C7N5 309 aa5.52□□□□□ -1.53
COL17A1-205ENST00000480127 PSMB8P28062 276 aa5.52□□□□□ -1.53
COL17A1-205ENST00000480127 LGALS7P47929 136 aa5.52□□□□□ -1.53
COL17A1-205ENST00000480127 CX3CL1P78423 397 aa5.52□□□□□ -1.53
COL17A1-205ENST00000480127 HLA-DRB3P79483 266 aa5.52□□□□□ -1.53
COL17A1-205ENST00000480127 TATDN3Q17R31 274 aa5.52□□□□□ -1.53
COL17A1-205ENST00000480127 RTL8BQ17RB0 113 aa5.52□□□□□ -1.53
COL17A1-205ENST00000480127 OGFRL1Q5TC84 451 aaPredicted RBP5.52□□□□□ -1.53
COL17A1-205ENST00000480127 ZNF660Q6AZW8 331 aaPredicted RBP5.52□□□□□ -1.53
COL17A1-205ENST00000480127 FAM71F2Q6NXP2 309 aa5.52□□□□□ -1.53
COL17A1-205ENST00000480127 ZNF833PQ6ZTB9 187 aa5.52□□□□□ -1.53
COL17A1-205ENST00000480127 SVOPQ8N4V2 548 aa5.52□□□□□ -1.53
COL17A1-205ENST00000480127 TCTEX1D1Q8N7M0 179 aa5.52□□□□□ -1.53
COL17A1-205ENST00000480127 OR10J5Q8NHC4 309 aa5.52□□□□□ -1.53
COL17A1-205ENST00000480127 ARPC1AQ92747 370 aa5.52□□□□□ -1.53
COL17A1-205ENST00000480127 RAB3CQ96E17 227 aa5.52□□□□□ -1.53
COL17A1-205ENST00000480127 CNBD2Q96M20 576 aa5.52□□□□□ -1.53
COL17A1-205ENST00000480127 NICN1Q9BSH3 213 aa5.52□□□□□ -1.53
COL17A1-205ENST00000480127 FAM103A1Q9BTL3 118 aaKnown RBP5.52□□□□□ -1.53
COL17A1-205ENST00000480127 KLK15Q9H2R5 256 aa5.52□□□□□ -1.53
COL17A1-205ENST00000480127 GNB4Q9HAV0 340 aa5.52□□□□□ -1.53
COL17A1-205ENST00000480127 PLSCR3Q9NRY6 295 aa5.52□□□□□ -1.53
COL17A1-205ENST00000480127 MBNL3Q9NUK0 354 aaKnown RBP5.52□□□□□ -1.53
COL17A1-205ENST00000480127 AK3Q9UIJ7 227 aa5.52□□□□□ -1.53
COL17A1-205ENST00000480127 SCOCQ9UIL1 159 aa5.52□□□□□ -1.53
COL17A1-205ENST00000480127 IGHV7-81A0A0B4J1V7 117 aa5.51□□□□□ -1.53
COL17A1-205ENST00000480127 A0A0B4J203 849 aa5.51□□□□□ -1.53
COL17A1-205ENST00000480127 A0A0G2JLM5 398 aa5.51□□□□□ -1.53
COL17A1-205ENST00000480127 ANKRD34BA5PLL1 514 aa5.51□□□□□ -1.53
COL17A1-205ENST00000480127 DPPA5A6NC42 116 aa5.51□□□□□ -1.53
COL17A1-205ENST00000480127 TRDCB7Z8K6 153 aa5.51□□□□□ -1.53
COL17A1-205ENST00000480127 SLC17A2O00624 439 aa5.51□□□□□ -1.53
COL17A1-205ENST00000480127 SHOXO15266 292 aa5.51□□□□□ -1.53
COL17A1-205ENST00000480127 SOCS1O15524 211 aa5.51□□□□□ -1.53
COL17A1-205ENST00000480127 SLC25A17O43808 307 aa5.51□□□□□ -1.53
COL17A1-205ENST00000480127 CA2P00918 260 aa5.51□□□□□ -1.53
COL17A1-205ENST00000480127 LGALS1P09382 135 aaKnown RBP5.51□□□□□ -1.53
COL17A1-205ENST00000480127 HSPA13P48723 471 aa5.51□□□□□ -1.53
COL17A1-205ENST00000480127 SLURP1P55000 103 aa5.51□□□□□ -1.53
COL17A1-205ENST00000480127 CLDN12P56749 244 aa5.51□□□□□ -1.53
COL17A1-205ENST00000480127 FXYD3Q14802 87 aa5.51□□□□□ -1.53
COL17A1-205ENST00000480127 HMGN3Q15651 99 aa5.51□□□□□ -1.53
COL17A1-205ENST00000480127 VMA21Q3ZAQ7 101 aa5.51□□□□□ -1.53
COL17A1-205ENST00000480127 LCE2DQ5TA82 110 aaPredicted RBP5.51□□□□□ -1.53
COL17A1-205ENST00000480127 HES5Q5TA89 166 aa5.51□□□□□ -1.53
COL17A1-205ENST00000480127 SIGIRRQ6IA17 410 aa5.51□□□□□ -1.53
COL17A1-205ENST00000480127 C5orf24Q7Z6I8 188 aa5.51□□□□□ -1.53
COL17A1-205ENST00000480127 LRRTM1Q86UE6 522 aa5.51□□□□□ -1.53
COL17A1-205ENST00000480127 SBSPONQ8IVN8 264 aa5.51□□□□□ -1.53
COL17A1-205ENST00000480127 ZNF491Q8N8L2 437 aa5.51□□□□□ -1.53
COL17A1-205ENST00000480127 LFNGQ8NES3 379 aa5.51□□□□□ -1.53
COL17A1-205ENST00000480127 OR5T1Q8NG75 326 aa5.51□□□□□ -1.53
COL17A1-205ENST00000480127 DCUN1D4Q92564 292 aa5.51□□□□□ -1.53
COL17A1-205ENST00000480127 FAM3DQ96BQ1 224 aa5.51□□□□□ -1.53
COL17A1-205ENST00000480127 ARHGAP5-AS1Q96IT6 56 aa5.51□□□□□ -1.53
COL17A1-205ENST00000480127 HARBI1Q96MB7 349 aa5.51□□□□□ -1.53
COL17A1-205ENST00000480127 RCHY1Q96PM5 261 aa5.51□□□□□ -1.53
COL17A1-205ENST00000480127 HDHD3Q9BSH5 251 aaPredicted RBP5.51□□□□□ -1.53
COL17A1-205ENST00000480127 ALX4Q9H161 411 aaPredicted RBP5.51□□□□□ -1.53
COL17A1-205ENST00000480127 OR2D2Q9H210 308 aa5.51□□□□□ -1.53
COL17A1-205ENST00000480127 IFI27L2Q9H2X8 130 aa5.51□□□□□ -1.53
COL17A1-205ENST00000480127 TUBA4BQ9H853 241 aa5.51□□□□□ -1.53
COL17A1-205ENST00000480127 ACOT13Q9NPJ3 140 aa5.51□□□□□ -1.53
COL17A1-205ENST00000480127 SLC35D1Q9NTN3 355 aa5.51□□□□□ -1.53
COL17A1-205ENST00000480127 COA4Q9NYJ1 87 aa5.51□□□□□ -1.53
COL17A1-205ENST00000480127 OR1A1Q9P1Q5 309 aa5.51□□□□□ -1.53
COL17A1-205ENST00000480127 V9GY05 133 aa5.51□□□□□ -1.53
COL17A1-205ENST00000480127 SACSQ9NZJ4 4579 aa5.51□□□□□ -1.53
COL17A1-205ENST00000480127 H0YJW9 148 aa5.5□□□□□ -1.53
COL17A1-205ENST00000480127 J3QRK9 145 aa5.5□□□□□ -1.53
COL17A1-205ENST00000480127 CASQ2O14958 399 aaPredicted RBP5.5□□□□□ -1.53
COL17A1-205ENST00000480127 FABP7O15540 132 aa5.5□□□□□ -1.53
COL17A1-205ENST00000480127 CREBL2O60519 120 aaPredicted RBP5.5□□□□□ -1.53
COL17A1-205ENST00000480127 SPDEFO95238 335 aa5.5□□□□□ -1.53
COL17A1-205ENST00000480127 HSPB1P04792 205 aaKnown RBP5.5□□□□□ -1.53
COL17A1-205ENST00000480127 SCTP09683 121 aa5.5□□□□□ -1.53
COL17A1-205ENST00000480127 UCHL1P09936 223 aa5.5□□□□□ -1.53
COL17A1-205ENST00000480127 LYL1P12980 280 aa5.5□□□□□ -1.53
COL17A1-205ENST00000480127 ZP3P21754 424 aa5.5□□□□□ -1.53
COL17A1-205ENST00000480127 SERPINB10P48595 397 aa5.5□□□□□ -1.53
COL17A1-205ENST00000480127 AQP4P55087 323 aa5.5□□□□□ -1.53
COL17A1-205ENST00000480127 RPS25P62851 125 aaKnown RBP5.5□□□□□ -1.53
COL17A1-205ENST00000480127 UNC119Q13432 240 aa5.5□□□□□ -1.53
COL17A1-205ENST00000480127 TPBGQ13641 420 aa5.5□□□□□ -1.53
COL17A1-205ENST00000480127 C1orf100Q5SVJ3 147 aa5.5□□□□□ -1.53
COL17A1-205ENST00000480127 OVCH2Q7RTZ1 564 aa5.5□□□□□ -1.53
COL17A1-205ENST00000480127 GTSCR1Q86UQ5 136 aa5.5□□□□□ -1.53
COL17A1-205ENST00000480127 PDPNQ86YL7 162 aa5.5□□□□□ -1.53
COL17A1-205ENST00000480127 SGPP2Q8IWX5 399 aa5.5□□□□□ -1.53
COL17A1-205ENST00000480127 GAPTQ8N292 157 aa5.5□□□□□ -1.53
COL17A1-205ENST00000480127 RNF152Q8N8N0 203 aa5.5□□□□□ -1.53
COL17A1-205ENST00000480127 NPBQ8NG41 125 aa5.5□□□□□ -1.53
COL17A1-205ENST00000480127 OR4A4PQ8NGN8 299 aa5.5□□□□□ -1.53
COL17A1-205ENST00000480127 ACOT12Q8WYK0 555 aa5.5□□□□□ -1.53
COL17A1-205ENST00000480127 RITA1Q96K30 269 aa5.5□□□□□ -1.53
COL17A1-205ENST00000480127 MGLLQ99685 303 aa5.5□□□□□ -1.53
COL17A1-205ENST00000480127 CENPOQ9BU64 300 aa5.5□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms