RNA–Protein interactions for RNA: ENST00000479894.1

HDLBP-238, Transcript of high density lipoprotein binding protein, human

TSL 5

Gene HDLBP, Length 840 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HDLBP-238	ENST00000479894	ITGB1BP1	O14713	200 aa		12.38	□□□□□ -0.43
HDLBP-238	ENST00000479894	YPEL1	O60688	119 aa		12.38	□□□□□ -0.43
HDLBP-238	ENST00000479894	LYL1	P12980	280 aa		12.38	□□□□□ -0.43
HDLBP-238	ENST00000479894	TBP	P20226	339 aa		12.38	□□□□□ -0.43
HDLBP-238	ENST00000479894	ETV6	P41212	452 aa		12.38	□□□□□ -0.43
HDLBP-238	ENST00000479894	OR3A3	P47888	321 aa		12.38	□□□□□ -0.43
HDLBP-238	ENST00000479894	RAB7A	P51149	207 aa		12.38	□□□□□ -0.43
HDLBP-238	ENST00000479894	ZNF45	Q02386	682 aa		12.38	□□□□□ -0.43
HDLBP-238	ENST00000479894	TCTEX1D4	Q5JR98	221 aa		12.38	□□□□□ -0.43
HDLBP-238	ENST00000479894	OR1L1	Q8NH94	360 aa		12.38	□□□□□ -0.43
HDLBP-238	ENST00000479894	GPX8	Q8TED1	209 aa		12.38	□□□□□ -0.43
HDLBP-238	ENST00000479894	S100Z	Q8WXG8	99 aa		12.38	□□□□□ -0.43
HDLBP-238	ENST00000479894	YPEL2	Q96QA6	119 aa		12.38	□□□□□ -0.43
HDLBP-238	ENST00000479894	GINS4	Q9BRT9	223 aa		12.38	□□□□□ -0.43
HDLBP-238	ENST00000479894	GAR1	Q9NY12	217 aa	Known RBP	12.38	□□□□□ -0.43
HDLBP-238	ENST00000479894	SLC23A1	Q9UHI7	598 aa		12.38	□□□□□ -0.43
HDLBP-238	ENST00000479894	ANXA10	Q9UJ72	324 aa		12.38	□□□□□ -0.43
HDLBP-238	ENST00000479894	CSMD3	Q7Z407	3707 aa		12.37	□□□□□ -0.43
HDLBP-238	ENST00000479894	MEX3A	A1L020	520 aa	Known RBP	12.37	□□□□□ -0.43
HDLBP-238	ENST00000479894	OOSP1	A8MZH6	123 aa		12.37	□□□□□ -0.43
HDLBP-238	ENST00000479894	SSX5	O60225	188 aa		12.37	□□□□□ -0.43
HDLBP-238	ENST00000479894	ARG1	P05089	322 aa		12.37	□□□□□ -0.43
HDLBP-238	ENST00000479894	GSTT2B	P0CG30	244 aa		12.37	□□□□□ -0.43
HDLBP-238	ENST00000479894	COX7A1	P24310	79 aa		12.37	□□□□□ -0.43
HDLBP-238	ENST00000479894	HTR1D	P28221	377 aa		12.37	□□□□□ -0.43
HDLBP-238	ENST00000479894	ZNF626	Q68DY1	528 aa		12.37	□□□□□ -0.43
HDLBP-238	ENST00000479894	CCDC144NL	Q6NUI1	221 aa		12.37	□□□□□ -0.43
HDLBP-238	ENST00000479894		Q6ZS46	218 aa		12.37	□□□□□ -0.43
HDLBP-238	ENST00000479894	LINC00311	Q8N616	119 aa		12.37	□□□□□ -0.43
HDLBP-238	ENST00000479894	OR2AK2	Q8NG84	335 aa		12.37	□□□□□ -0.43
HDLBP-238	ENST00000479894	OR10X1	Q8NGY0	326 aa		12.37	□□□□□ -0.43
HDLBP-238	ENST00000479894	MALSU1	Q96EH3	234 aa		12.37	□□□□□ -0.43
HDLBP-238	ENST00000479894	HUWE1	Q7Z6Z7	4374 aa	Known RBP	12.36	□□□□□ -0.43
HDLBP-238	ENST00000479894	TRBV6-7	A0A0A0MS04	114 aa		12.36	□□□□□ -0.43
HDLBP-238	ENST00000479894	LEUTX	A8MZ59	168 aa		12.36	□□□□□ -0.43
HDLBP-238	ENST00000479894		J3QR06	171 aa		12.36	□□□□□ -0.43
HDLBP-238	ENST00000479894	GSTZ1	O43708	216 aa	Predicted RBP	12.36	□□□□□ -0.43
HDLBP-238	ENST00000479894	NAT1	P18440	290 aa		12.36	□□□□□ -0.43
HDLBP-238	ENST00000479894	CEACAM6	P40199	344 aa		12.36	□□□□□ -0.43
HDLBP-238	ENST00000479894	AP3S2	P59780	193 aa		12.36	□□□□□ -0.43
HDLBP-238	ENST00000479894	BLCAP	P62952	87 aa		12.36	□□□□□ -0.43
HDLBP-238	ENST00000479894	LTC4S	Q16873	150 aa		12.36	□□□□□ -0.43
HDLBP-238	ENST00000479894	TMEM95	Q3KNT9	176 aa		12.36	□□□□□ -0.43
HDLBP-238	ENST00000479894	MORN2	Q502X0	79 aa		12.36	□□□□□ -0.43
HDLBP-238	ENST00000479894	CENPV	Q7Z7K6	275 aa	Predicted RBP	12.36	□□□□□ -0.43
HDLBP-238	ENST00000479894	CCDC190	Q86UF4	302 aa		12.36	□□□□□ -0.43
HDLBP-238	ENST00000479894	TMEM219	Q86XT9	240 aa		12.36	□□□□□ -0.43
HDLBP-238	ENST00000479894	MRPL41	Q8IXM3	137 aa	Known RBP	12.36	□□□□□ -0.43
HDLBP-238	ENST00000479894	OR5AP2	Q8NGF4	316 aa		12.36	□□□□□ -0.43
HDLBP-238	ENST00000479894	OR4X2	Q8NGF9	303 aa		12.36	□□□□□ -0.43
HDLBP-238	ENST00000479894	SMIM4	Q8WVI0	70 aa		12.36	□□□□□ -0.43
HDLBP-238	ENST00000479894	ABHD1	Q96SE0	405 aa		12.36	□□□□□ -0.43
HDLBP-238	ENST00000479894	CABLES2	Q9BTV7	478 aa		12.36	□□□□□ -0.43
HDLBP-238	ENST00000479894	PALMD	Q9NP74	551 aa		12.36	□□□□□ -0.43
HDLBP-238	ENST00000479894	ABCB10	Q9NRK6	738 aa		12.36	□□□□□ -0.43
HDLBP-238	ENST00000479894	MTFP1	Q9UDX5	166 aa		12.36	□□□□□ -0.43
HDLBP-238	ENST00000479894	ZNF230	Q9UIE0	474 aa	Predicted RBP	12.36	□□□□□ -0.43
HDLBP-238	ENST00000479894	SLC22A5	O76082	557 aa		12.35	□□□□□ -0.43
HDLBP-238	ENST00000479894	SCT	P09683	121 aa		12.35	□□□□□ -0.43
HDLBP-238	ENST00000479894	GSTT2	P0CG29	244 aa		12.35	□□□□□ -0.43
HDLBP-238	ENST00000479894	DYNLT3	P51808	116 aa		12.35	□□□□□ -0.43
HDLBP-238	ENST00000479894	MADCAM1	Q13477	382 aa		12.35	□□□□□ -0.43
HDLBP-238	ENST00000479894	PYDC2	Q56P42	97 aa		12.35	□□□□□ -0.43
HDLBP-238	ENST00000479894	TMEM17	Q86X19	198 aa		12.35	□□□□□ -0.43
HDLBP-238	ENST00000479894	GDPD1	Q8N9F7	314 aa		12.35	□□□□□ -0.43
HDLBP-238	ENST00000479894	OR5H2	Q8NGV7	314 aa		12.35	□□□□□ -0.43
HDLBP-238	ENST00000479894	DEDD2	Q8WXF8	326 aa		12.35	□□□□□ -0.43
HDLBP-238	ENST00000479894	BORCS5	Q969J3	196 aa		12.35	□□□□□ -0.43
HDLBP-238	ENST00000479894	SOST	Q9BQB4	213 aa		12.35	□□□□□ -0.43
HDLBP-238	ENST00000479894	TOLLIP	Q9H0E2	274 aa		12.35	□□□□□ -0.43
HDLBP-238	ENST00000479894	DPM3	Q9P2X0	92 aa		12.35	□□□□□ -0.43
HDLBP-238	ENST00000479894	ELF5	Q9UKW6	265 aa	Predicted RBP	12.35	□□□□□ -0.43
HDLBP-238	ENST00000479894	ANAPC10	Q9UM13	185 aa		12.35	□□□□□ -0.43
HDLBP-238	ENST00000479894	PSG11	Q9UQ72	335 aa		12.35	□□□□□ -0.43
HDLBP-238	ENST00000479894	ODF3B	A8MYP8	253 aa		12.34	□□□□□ -0.43
HDLBP-238	ENST00000479894	ZNF736	B4DX44	427 aa	Predicted RBP	12.34	□□□□□ -0.43
HDLBP-238	ENST00000479894	BET1	O15155	118 aa		12.34	□□□□□ -0.43
HDLBP-238	ENST00000479894	TXNL1	O43396	289 aa		12.34	□□□□□ -0.43
HDLBP-238	ENST00000479894	MMP23A	O75900	390 aa		12.34	□□□□□ -0.43
HDLBP-238	ENST00000479894	IGLV1-47	P01700	117 aa		12.34	□□□□□ -0.43
HDLBP-238	ENST00000479894	IFNA6	P05013	189 aa		12.34	□□□□□ -0.43
HDLBP-238	ENST00000479894	RAB13	P51153	203 aa		12.34	□□□□□ -0.43
HDLBP-238	ENST00000479894	TAS2R19	P59542	299 aa		12.34	□□□□□ -0.43
HDLBP-238	ENST00000479894	CDK10	Q15131	360 aa		12.34	□□□□□ -0.43
HDLBP-238	ENST00000479894	HLA-DRB5	Q30154	266 aa		12.34	□□□□□ -0.43
HDLBP-238	ENST00000479894	PLA1A	Q53H76	456 aa		12.34	□□□□□ -0.43
HDLBP-238	ENST00000479894	SLC25A48	Q6ZT89	311 aa	Known RBP	12.34	□□□□□ -0.43
HDLBP-238	ENST00000479894	PIPOX	Q9P0Z9	390 aa		12.34	□□□□□ -0.43
HDLBP-238	ENST00000479894	RBM7	Q9Y580	266 aa	Known RBP	12.34	□□□□□ -0.43
HDLBP-238	ENST00000479894	SORL1	Q92673	2214 aa		12.33	□□□□□ -0.44
HDLBP-238	ENST00000479894	BUB1B-PAK6	H3BSN5	160 aa		12.33	□□□□□ -0.44
HDLBP-238	ENST00000479894	OR5H8	P0DN80	308 aa		12.33	□□□□□ -0.44
HDLBP-238	ENST00000479894	BRS3	P32247	399 aa		12.33	□□□□□ -0.44
HDLBP-238	ENST00000479894	FAU	P35544	74 aa	Known RBP	12.33	□□□□□ -0.44
HDLBP-238	ENST00000479894	INPP1	P49441	399 aa		12.33	□□□□□ -0.44
HDLBP-238	ENST00000479894	MEF2D	Q14814	521 aa		12.33	□□□□□ -0.44
HDLBP-238	ENST00000479894	ETV3L	Q6ZN32	361 aa		12.33	□□□□□ -0.44
HDLBP-238	ENST00000479894	LHFPL4	Q7Z7J7	247 aa		12.33	□□□□□ -0.44
HDLBP-238	ENST00000479894		Q8N402	240 aa		12.33	□□□□□ -0.44
HDLBP-238	ENST00000479894	TMEM229B	Q8NBD8	167 aa		12.33	□□□□□ -0.44

Retrieved 100 of 20,778 RNA–protein pairs in 98.6 ms