RNA–Protein interactions for RNA: ENST00000479602.5

DDX56-211, Transcript of DEAD-box helicase 56, humanhuman

TSL 2

Gene DDX56, Length 440 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-211ENST00000479602 RBFOX2O43251 390 aaKnown RBP eCLIP7.15□□□□□ -1.26
DDX56-211ENST00000479602 HSPA12AO43301 675 aa7.15□□□□□ -1.26
DDX56-211ENST00000479602 B3GALNT1O75752 331 aa7.15□□□□□ -1.26
DDX56-211ENST00000479602 TSPAN9O75954 239 aa7.15□□□□□ -1.26
DDX56-211ENST00000479602 GAPDHP04406 335 aaKnown RBP7.15□□□□□ -1.26
DDX56-211ENST00000479602 BRS3P32247 399 aa7.15□□□□□ -1.26
DDX56-211ENST00000479602 PPP1CCP36873 323 aaKnown RBP7.15□□□□□ -1.26
DDX56-211ENST00000479602 CEACAM6P40199 344 aa7.15□□□□□ -1.26
DDX56-211ENST00000479602 PPP5CP53041 499 aa7.15□□□□□ -1.26
DDX56-211ENST00000479602 ARPC4P59998 168 aa7.15□□□□□ -1.26
DDX56-211ENST00000479602 DGCR2P98153 550 aa7.15□□□□□ -1.26
DDX56-211ENST00000479602 KLRD1Q13241 179 aa7.15□□□□□ -1.26
DDX56-211ENST00000479602 EIF4EBP1Q13541 118 aaPredicted RBP7.15□□□□□ -1.26
DDX56-211ENST00000479602 GNMTQ14749 295 aa7.15□□□□□ -1.26
DDX56-211ENST00000479602 LRRC75BQ2VPJ9 315 aa7.15□□□□□ -1.26
DDX56-211ENST00000479602 IGSF11Q5DX21 431 aa7.15□□□□□ -1.26
DDX56-211ENST00000479602 LPCAT3Q6P1A2 487 aa7.15□□□□□ -1.26
DDX56-211ENST00000479602 FAM131AQ6UXB0 335 aa7.15□□□□□ -1.26
DDX56-211ENST00000479602 ZNF66Q6ZN08 573 aa7.15□□□□□ -1.26
DDX56-211ENST00000479602 TMEM17Q86X19 198 aa7.15□□□□□ -1.26
DDX56-211ENST00000479602 Q8N402 240 aa7.15□□□□□ -1.26
DDX56-211ENST00000479602 ZNF645Q8N7E2 425 aa7.15□□□□□ -1.26
DDX56-211ENST00000479602 GVQW1Q8N7I0 195 aa7.15□□□□□ -1.26
DDX56-211ENST00000479602 OR5AN1Q8NGI8 311 aa7.15□□□□□ -1.26
DDX56-211ENST00000479602 OR5H2Q8NGV7 314 aa7.15□□□□□ -1.26
DDX56-211ENST00000479602 OR10X1Q8NGY0 326 aa7.15□□□□□ -1.26
DDX56-211ENST00000479602 S1PR3Q99500 378 aa7.15□□□□□ -1.26
DDX56-211ENST00000479602 ST6GALNAC5Q9BVH7 336 aa7.15□□□□□ -1.26
DDX56-211ENST00000479602 WDR12Q9GZL7 423 aaKnown RBP7.15□□□□□ -1.26
DDX56-211ENST00000479602 RANBP3Q9H6Z4 567 aaPredicted RBP7.15□□□□□ -1.26
DDX56-211ENST00000479602 RAB18Q9NP72 206 aa7.15□□□□□ -1.26
DDX56-211ENST00000479602 KLK11Q9UBX7 282 aa7.15□□□□□ -1.26
DDX56-211ENST00000479602 ZNF230Q9UIE0 474 aaPredicted RBP7.15□□□□□ -1.26
DDX56-211ENST00000479602 SAA2-SAA4A0A096LPE2 208 aa7.14□□□□□ -1.27
DDX56-211ENST00000479602 TRAV39A0A0B4J263 110 aa7.14□□□□□ -1.27
DDX56-211ENST00000479602 NAP1L6A6NFF2 107 aa7.14□□□□□ -1.27
DDX56-211ENST00000479602 M0QZK8 103 aa7.14□□□□□ -1.27
DDX56-211ENST00000479602 FGF16O43320 207 aa7.14□□□□□ -1.27
DDX56-211ENST00000479602 SPDEFO95238 335 aa7.14□□□□□ -1.27
DDX56-211ENST00000479602 PPYP01298 95 aa7.14□□□□□ -1.27
DDX56-211ENST00000479602 IGHV4-59P01825 116 aa7.14□□□□□ -1.27
DDX56-211ENST00000479602 SAA2P0DJI9 122 aaPredicted RBP7.14□□□□□ -1.27
DDX56-211ENST00000479602 RRASP10301 218 aa7.14□□□□□ -1.27
DDX56-211ENST00000479602 COX7A1P24310 79 aa7.14□□□□□ -1.27
DDX56-211ENST00000479602 NFYBP25208 207 aa7.14□□□□□ -1.27
DDX56-211ENST00000479602 MC5RP33032 325 aa7.14□□□□□ -1.27
DDX56-211ENST00000479602 HRH1P35367 487 aa7.14□□□□□ -1.27
DDX56-211ENST00000479602 FAUP35544 74 aaKnown RBP7.14□□□□□ -1.27
DDX56-211ENST00000479602 RAB13P51153 203 aa7.14□□□□□ -1.27
DDX56-211ENST00000479602 LUMP51884 338 aaPredicted RBP7.14□□□□□ -1.27
DDX56-211ENST00000479602 RND3P61587 244 aa7.14□□□□□ -1.27
DDX56-211ENST00000479602 KLF9Q13886 244 aaPredicted RBP7.14□□□□□ -1.27
DDX56-211ENST00000479602 RNASE10Q5GAN6 216 aaKnown RBP7.14□□□□□ -1.27
DDX56-211ENST00000479602 DHRS7BQ6IAN0 325 aaPredicted RBP7.14□□□□□ -1.27
DDX56-211ENST00000479602 Q6ZSV7 163 aa7.14□□□□□ -1.27
DDX56-211ENST00000479602 SNX29P2Q8IUI4 249 aa7.14□□□□□ -1.27
DDX56-211ENST00000479602 Q8N6K4 173 aa7.14□□□□□ -1.27
DDX56-211ENST00000479602 BVESQ8NE79 360 aa7.14□□□□□ -1.27
DDX56-211ENST00000479602 OR52L2PQ8NGH6 319 aa7.14□□□□□ -1.27
DDX56-211ENST00000479602 OR10V1Q8NGI7 309 aa7.14□□□□□ -1.27
DDX56-211ENST00000479602 PIFOQ8TCI5 191 aa7.14□□□□□ -1.27
DDX56-211ENST00000479602 IL1F10Q8WWZ1 152 aa7.14□□□□□ -1.27
DDX56-211ENST00000479602 DDB2Q92466 427 aa7.14□□□□□ -1.27
DDX56-211ENST00000479602 TOMM40LQ969M1 308 aa7.14□□□□□ -1.27
DDX56-211ENST00000479602 ZDHHC16Q969W1 377 aa7.14□□□□□ -1.27
DDX56-211ENST00000479602 RPEQ96AT9 228 aa7.14□□□□□ -1.27
DDX56-211ENST00000479602 SDHCQ99643 169 aaPredicted RBP7.14□□□□□ -1.27
DDX56-211ENST00000479602 HSD17B10Q99714 261 aaKnown RBP7.14□□□□□ -1.27
DDX56-211ENST00000479602 PRRT1Q99946 306 aa7.14□□□□□ -1.27
DDX56-211ENST00000479602 GINS4Q9BRT9 223 aa7.14□□□□□ -1.27
DDX56-211ENST00000479602 OR1A1Q9P1Q5 309 aa7.14□□□□□ -1.27
DDX56-211ENST00000479602 VPREB3Q9UKI3 123 aa7.14□□□□□ -1.27
DDX56-211ENST00000479602 MRPS7Q9Y2R9 242 aaKnown RBP7.14□□□□□ -1.27
DDX56-211ENST00000479602 FAM96BQ9Y3D0 163 aa7.14□□□□□ -1.27
DDX56-211ENST00000479602 DNAH9Q9NYC9 4486 aa7.13□□□□□ -1.27
DDX56-211ENST00000479602 IGHV1-3A0A0C4DH29 117 aa7.13□□□□□ -1.27
DDX56-211ENST00000479602 SLC31A2O15432 143 aa7.13□□□□□ -1.27
DDX56-211ENST00000479602 ST8SIA5O15466 376 aa7.13□□□□□ -1.27
DDX56-211ENST00000479602 GPR137BO60478 399 aa7.13□□□□□ -1.27
DDX56-211ENST00000479602 PROP1O75360 226 aa7.13□□□□□ -1.27
DDX56-211ENST00000479602 IGLV2-14P01704 120 aa7.13□□□□□ -1.27
DDX56-211ENST00000479602 FCER2P06734 321 aa7.13□□□□□ -1.27
DDX56-211ENST00000479602 ZNF735P0CB33 412 aa7.13□□□□□ -1.27
DDX56-211ENST00000479602 AKAIN1P0CW23 69 aa7.13□□□□□ -1.27
DDX56-211ENST00000479602 PTHLHP12272 177 aa7.13□□□□□ -1.27
DDX56-211ENST00000479602 OR3A3P47888 321 aa7.13□□□□□ -1.27
DDX56-211ENST00000479602 LSAMPQ13449 338 aa7.13□□□□□ -1.27
DDX56-211ENST00000479602 UTF1Q5T230 341 aa7.13□□□□□ -1.27
DDX56-211ENST00000479602 AADACL3Q5VUY0 350 aa7.13□□□□□ -1.27
DDX56-211ENST00000479602 STEAP1BQ6NZ63 245 aa7.13□□□□□ -1.27
DDX56-211ENST00000479602 C11orf88Q6PI97 169 aa7.13□□□□□ -1.27
DDX56-211ENST00000479602 LHFPL4Q7Z7J7 247 aa7.13□□□□□ -1.27
DDX56-211ENST00000479602 PDPNQ86YL7 162 aa7.13□□□□□ -1.27
DDX56-211ENST00000479602 TGIF2LXQ8IUE1 241 aa7.13□□□□□ -1.27
DDX56-211ENST00000479602 Q8N2B8 174 aa7.13□□□□□ -1.27
DDX56-211ENST00000479602 OR6F1Q8NGZ6 308 aa7.13□□□□□ -1.27
DDX56-211ENST00000479602 SETD6Q8TBK2 473 aa7.13□□□□□ -1.27
DDX56-211ENST00000479602 NABP2Q9BQ15 211 aa7.13□□□□□ -1.27
DDX56-211ENST00000479602 THAP7Q9BT49 309 aaPredicted RBP7.13□□□□□ -1.27
DDX56-211ENST00000479602 PALMDQ9NP74 551 aa7.13□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms