RNA–Protein interactions for RNA: ENST00000478938.1

SDF4-206, Transcript of stromal cell derived factor 4, humanhuman

TSL 2

Gene SDF4, Length 2,591 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-206ENST00000478938 PLCXD2Q0VAA5 305 aa18.01■□□□□ 0.47
SDF4-206ENST00000478938 PRAMEF20Q5VT98 475 aa18.01■□□□□ 0.47
SDF4-206ENST00000478938 MMABQ96EY8 250 aaPredicted RBP18.01■□□□□ 0.47
SDF4-206ENST00000478938 MALLQ13021 153 aa18.01■□□□□ 0.47
SDF4-206ENST00000478938 IL36BQ9NZH7 164 aa18.01■□□□□ 0.47
SDF4-206ENST00000478938 TRAV9-2A0A087WT02 112 aa18■□□□□ 0.47
SDF4-206ENST00000478938 H0Y8X5 98 aa18■□□□□ 0.47
SDF4-206ENST00000478938 PGLYRP1O75594 196 aaPredicted RBP18■□□□□ 0.47
SDF4-206ENST00000478938 LGALS4P56470 323 aa18■□□□□ 0.47
SDF4-206ENST00000478938 CLDN15P56746 228 aa18■□□□□ 0.47
SDF4-206ENST00000478938 MYBPHQ13203 477 aa18■□□□□ 0.47
SDF4-206ENST00000478938 GAB4Q2WGN9 574 aa18■□□□□ 0.47
SDF4-206ENST00000478938 VWA1Q6PCB0 445 aa18■□□□□ 0.47
SDF4-206ENST00000478938 VASH2Q86V25 355 aa18■□□□□ 0.47
SDF4-206ENST00000478938 OSR2Q8N2R0 312 aa18■□□□□ 0.47
SDF4-206ENST00000478938 PDCD6O75340 191 aa18■□□□□ 0.47
SDF4-206ENST00000478938 NHLH1Q02575 133 aa18■□□□□ 0.47
SDF4-206ENST00000478938 PSG7Q13046 419 aa18■□□□□ 0.47
SDF4-206ENST00000478938 FAM58AQ8N1B3 248 aa18■□□□□ 0.47
SDF4-206ENST00000478938 OCC1Q8TAD7 63 aa18■□□□□ 0.47
SDF4-206ENST00000478938 BORCS7Q96B45 105 aa18■□□□□ 0.47
SDF4-206ENST00000478938 TIMM9Q9Y5J7 89 aa18■□□□□ 0.47
SDF4-206ENST00000478938 SELENOKQ9Y6D0 94 aa18■□□□□ 0.47
SDF4-206ENST00000478938 CNTRLQ7Z7A1 2325 aa17.99■□□□□ 0.47
SDF4-206ENST00000478938 MUC21A0A0G2JKD1 596 aa17.99■□□□□ 0.47
SDF4-206ENST00000478938 MUC21A0A140T8X8 626 aa17.99■□□□□ 0.47
SDF4-206ENST00000478938 NPIPB13A6NJU9 1138 aa17.99■□□□□ 0.47
SDF4-206ENST00000478938 NPIPB4C9JG80 1138 aa17.99■□□□□ 0.47
SDF4-206ENST00000478938 C17orf112F2Z3M2 114 aa17.99■□□□□ 0.47
SDF4-206ENST00000478938 G3V3Y1 287 aa17.99■□□□□ 0.47
SDF4-206ENST00000478938 PDE6DO43924 150 aa17.99■□□□□ 0.47
SDF4-206ENST00000478938 CELA3BP08861 270 aa17.99■□□□□ 0.47
SDF4-206ENST00000478938 Q56UQ5 140 aa17.99■□□□□ 0.47
SDF4-206ENST00000478938 MUC21Q5SSG8 566 aa17.99■□□□□ 0.47
SDF4-206ENST00000478938 NAT8BQ9UHF3 227 aa17.99■□□□□ 0.47
SDF4-206ENST00000478938 CDH23Q9H251 3354 aa17.99■□□□□ 0.47
SDF4-206ENST00000478938 SAA2-SAA4A0A096LPE2 208 aa17.99■□□□□ 0.47
SDF4-206ENST00000478938 ADH1BP00325 375 aa17.99■□□□□ 0.47
SDF4-206ENST00000478938 SERPINE2P07093 398 aa17.99■□□□□ 0.47
SDF4-206ENST00000478938 APOBEC3AP31941 199 aaPredicted RBP17.99■□□□□ 0.47
SDF4-206ENST00000478938 TFF3Q07654 80 aa17.99■□□□□ 0.47
SDF4-206ENST00000478938 OR8B8Q15620 311 aa17.99■□□□□ 0.47
SDF4-206ENST00000478938 OR2AE1Q8NHA4 323 aa17.99■□□□□ 0.47
SDF4-206ENST00000478938 SOHLH2Q9NX45 425 aa17.99■□□□□ 0.47
SDF4-206ENST00000478938 CD207Q9UJ71 328 aa17.99■□□□□ 0.47
SDF4-206ENST00000478938 CD300LBA8K4G0 201 aa17.98■□□□□ 0.47
SDF4-206ENST00000478938 OR7C1O76099 320 aaPredicted RBP17.98■□□□□ 0.47
SDF4-206ENST00000478938 NUDT3O95989 172 aa17.98■□□□□ 0.47
SDF4-206ENST00000478938 OR1D5P58170 312 aa17.98■□□□□ 0.47
SDF4-206ENST00000478938 RPS21P63220 83 aaKnown RBP17.98■□□□□ 0.47
SDF4-206ENST00000478938 LHX8Q68G74 356 aa17.98■□□□□ 0.47
SDF4-206ENST00000478938 TMEM211Q6ICI0 200 aa17.98■□□□□ 0.47
SDF4-206ENST00000478938 SFXN3Q9BWM7 321 aa17.98■□□□□ 0.47
SDF4-206ENST00000478938 TRAV8-6A0A0B4J262 113 aa17.98■□□□□ 0.47
SDF4-206ENST00000478938 A0A1W2PQD3 144 aa17.98■□□□□ 0.47
SDF4-206ENST00000478938 F2RP25116 425 aa17.98■□□□□ 0.47
SDF4-206ENST00000478938 CCR5P51681 352 aa17.98■□□□□ 0.47
SDF4-206ENST00000478938 ARF1P84077 181 aaKnown RBP17.98■□□□□ 0.47
SDF4-206ENST00000478938 C2orf27AQ580R0 203 aa17.98■□□□□ 0.47
SDF4-206ENST00000478938 FAM71F2Q6NXP2 309 aa17.98■□□□□ 0.47
SDF4-206ENST00000478938 IL36GQ9NZH8 169 aa17.98■□□□□ 0.47
SDF4-206ENST00000478938 RP1P56715 2156 aa17.98■□□□□ 0.47
SDF4-206ENST00000478938 RAB29O14966 203 aa17.97■□□□□ 0.47
SDF4-206ENST00000478938 LGALS7P47929 136 aa17.97■□□□□ 0.47
SDF4-206ENST00000478938 RPS16P62249 146 aaKnown RBP17.97■□□□□ 0.47
SDF4-206ENST00000478938 TSKUQ8WUA8 353 aa17.97■□□□□ 0.47
SDF4-206ENST00000478938 QTRT1Q9BXR0 403 aaKnown RBP17.97■□□□□ 0.47
SDF4-206ENST00000478938 MTIF3Q9H2K0 278 aaKnown RBP17.97■□□□□ 0.47
SDF4-206ENST00000478938 SIRPB1O00241 398 aa17.97■□□□□ 0.47
SDF4-206ENST00000478938 ARF6P62330 175 aa17.97■□□□□ 0.47
SDF4-206ENST00000478938 PMCHL1Q16048 86 aa17.97■□□□□ 0.47
SDF4-206ENST00000478938 BVES-AS1Q5T3Y7 98 aa17.97■□□□□ 0.47
SDF4-206ENST00000478938 ZNF324BQ6AW86 544 aaPredicted RBP17.97■□□□□ 0.47
SDF4-206ENST00000478938 SLC25A47Q6Q0C1 308 aa17.97■□□□□ 0.47
SDF4-206ENST00000478938 PRSS57Q6UWY2 283 aa17.97■□□□□ 0.47
SDF4-206ENST00000478938 OR4P4Q8NGL7 312 aa17.97■□□□□ 0.47
SDF4-206ENST00000478938 DEGS1O15121 323 aa17.96■□□□□ 0.47
SDF4-206ENST00000478938 OR7C2O60412 319 aa17.96■□□□□ 0.47
SDF4-206ENST00000478938 IGKV1-39P01597 117 aa17.96■□□□□ 0.47
SDF4-206ENST00000478938 IGKV1D-39P04432 117 aa17.96■□□□□ 0.47
SDF4-206ENST00000478938 COX5AP20674 150 aa17.96■□□□□ 0.47
SDF4-206ENST00000478938 SRIP30626 198 aa17.96■□□□□ 0.47
SDF4-206ENST00000478938 OTX2P32243 289 aa17.96■□□□□ 0.47
SDF4-206ENST00000478938 OR8I2Q8N0Y5 310 aa17.96■□□□□ 0.47
SDF4-206ENST00000478938 DEFB125Q8N687 156 aa17.96■□□□□ 0.47
SDF4-206ENST00000478938 RDH5Q92781 318 aa17.96■□□□□ 0.47
SDF4-206ENST00000478938 LIPT2A6NK58 231 aa17.96■□□□□ 0.47
SDF4-206ENST00000478938 K7EN84 100 aa17.96■□□□□ 0.47
SDF4-206ENST00000478938 DRD1P21728 446 aa17.96■□□□□ 0.47
SDF4-206ENST00000478938 OR10J3Q5JRS4 329 aa17.96■□□□□ 0.47
SDF4-206ENST00000478938 MED12Q93074 2177 aa17.96■□□□□ 0.47
SDF4-206ENST00000478938 SCO2A0A1W2PP80 73 aa17.95■□□□□ 0.46
SDF4-206ENST00000478938 SLC35B1P78383 322 aa17.95■□□□□ 0.46
SDF4-206ENST00000478938 RSPO1Q2MKA7 263 aaPredicted RBP17.95■□□□□ 0.46
SDF4-206ENST00000478938 C19orf35Q6ZS72 473 aa17.95■□□□□ 0.46
SDF4-206ENST00000478938 OR10P1Q8NGE3 313 aa17.95■□□□□ 0.46
SDF4-206ENST00000478938 GNG7O60262 68 aa17.95■□□□□ 0.46
SDF4-206ENST00000478938 HTD2P86397 168 aa17.95■□□□□ 0.46
SDF4-206ENST00000478938 PAX2Q02962 417 aa17.95■□□□□ 0.46
SDF4-206ENST00000478938 MMD2Q8IY49 270 aa17.95■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms