RNA–Protein interactions for RNA: ENST00000478050.1

SF3B6-202, Transcript of splicing factor 3b subunit 6, humanhuman

TSL 2

Gene SF3B6, Length 720 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B6-202ENST00000478050 UTP20O75691 2785 aaKnown RBP4.16□□□□□ -1.74
SF3B6-202ENST00000478050 RNF212BA8MTL3 300 aa4.16□□□□□ -1.74
SF3B6-202ENST00000478050 IQCF6A8MYZ5 107 aa4.16□□□□□ -1.74
SF3B6-202ENST00000478050 C9JQL5 133 aa4.16□□□□□ -1.74
SF3B6-202ENST00000478050 HSPB6O14558 160 aa4.16□□□□□ -1.74
SF3B6-202ENST00000478050 HS3ST1O14792 307 aa4.16□□□□□ -1.74
SF3B6-202ENST00000478050 SMPD2O60906 423 aa4.16□□□□□ -1.74
SF3B6-202ENST00000478050 AGFG2O95081 481 aa4.16□□□□□ -1.74
SF3B6-202ENST00000478050 CNOT4O95628 575 aaKnown RBP4.16□□□□□ -1.74
SF3B6-202ENST00000478050 HBE1P02100 147 aa4.16□□□□□ -1.74
SF3B6-202ENST00000478050 AMY1AP04745 511 aa4.16□□□□□ -1.74
SF3B6-202ENST00000478050 IFNA4P05014 189 aa4.16□□□□□ -1.74
SF3B6-202ENST00000478050 ACAA1P09110 424 aaPredicted RBP4.16□□□□□ -1.74
SF3B6-202ENST00000478050 SFTPCP11686 197 aa4.16□□□□□ -1.74
SF3B6-202ENST00000478050 ZNF44P15621 663 aa4.16□□□□□ -1.74
SF3B6-202ENST00000478050 ZNF14P17017 642 aaPredicted RBP4.16□□□□□ -1.74
SF3B6-202ENST00000478050 CA6P23280 308 aa4.16□□□□□ -1.74
SF3B6-202ENST00000478050 NFYBP25208 207 aa4.16□□□□□ -1.74
SF3B6-202ENST00000478050 ATP6V0CP27449 155 aa4.16□□□□□ -1.74
SF3B6-202ENST00000478050 CD200P41217 278 aa4.16□□□□□ -1.74
SF3B6-202ENST00000478050 HOXA1P49639 335 aaPredicted RBP4.16□□□□□ -1.74
SF3B6-202ENST00000478050 RAB13P51153 203 aa4.16□□□□□ -1.74
SF3B6-202ENST00000478050 DYNLT3P51808 116 aa4.16□□□□□ -1.74
SF3B6-202ENST00000478050 RAB2AP61019 212 aa4.16□□□□□ -1.74
SF3B6-202ENST00000478050 RAB5BP61020 215 aa4.16□□□□□ -1.74
SF3B6-202ENST00000478050 UBE2NP61088 152 aaKnown RBP4.16□□□□□ -1.74
SF3B6-202ENST00000478050 PPP1CBP62140 327 aa4.16□□□□□ -1.74
SF3B6-202ENST00000478050 ARG2P78540 354 aa4.16□□□□□ -1.74
SF3B6-202ENST00000478050 TGFBR3Q03167 851 aa4.16□□□□□ -1.74
SF3B6-202ENST00000478050 CLINT1Q14677 625 aa4.16□□□□□ -1.74
SF3B6-202ENST00000478050 RHEBQ15382 184 aa4.16□□□□□ -1.74
SF3B6-202ENST00000478050 RNF212Q495C1 297 aa4.16□□□□□ -1.74
SF3B6-202ENST00000478050 CXorf66Q5JRM2 361 aaPredicted RBP4.16□□□□□ -1.74
SF3B6-202ENST00000478050 HES3Q5TGS1 186 aa4.16□□□□□ -1.74
SF3B6-202ENST00000478050 TMEM200BQ69YZ2 307 aa4.16□□□□□ -1.74
SF3B6-202ENST00000478050 IGFL4Q6B9Z1 124 aa4.16□□□□□ -1.74
SF3B6-202ENST00000478050 OR2T2Q6IF00 324 aa4.16□□□□□ -1.74
SF3B6-202ENST00000478050 INO80CQ6PI98 192 aaPredicted RBP4.16□□□□□ -1.74
SF3B6-202ENST00000478050 DHRS13Q6UX07 377 aa4.16□□□□□ -1.74
SF3B6-202ENST00000478050 ZNF497Q6ZNH5 498 aa4.16□□□□□ -1.74
SF3B6-202ENST00000478050 STX12Q86Y82 276 aa4.16□□□□□ -1.74
SF3B6-202ENST00000478050 LINC00518Q8N0U6 118 aa4.16□□□□□ -1.74
SF3B6-202ENST00000478050 OR5C1Q8NGR4 320 aa4.16□□□□□ -1.74
SF3B6-202ENST00000478050 OR2G3Q8NGZ4 309 aa4.16□□□□□ -1.74
SF3B6-202ENST00000478050 RNASE11Q8TAA1 199 aaKnown RBP4.16□□□□□ -1.74
SF3B6-202ENST00000478050 FAM213BQ8TBF2 198 aa4.16□□□□□ -1.74
SF3B6-202ENST00000478050 PLPPR1Q8TBJ4 325 aa4.16□□□□□ -1.74
SF3B6-202ENST00000478050 RXFP4Q8TDU9 374 aa4.16□□□□□ -1.74
SF3B6-202ENST00000478050 NEU4Q8WWR8 484 aaPredicted RBP4.16□□□□□ -1.74
SF3B6-202ENST00000478050 RDH5Q92781 318 aa4.16□□□□□ -1.74
SF3B6-202ENST00000478050 ZNF488Q96MN9 340 aa4.16□□□□□ -1.74
SF3B6-202ENST00000478050 RAB40CQ96S21 281 aa4.16□□□□□ -1.74
SF3B6-202ENST00000478050 ATP5SQ99766 215 aa4.16□□□□□ -1.74
SF3B6-202ENST00000478050 C1orf43Q9BWL3 253 aa4.16□□□□□ -1.74
SF3B6-202ENST00000478050 EGLN1Q9GZT9 426 aa4.16□□□□□ -1.74
SF3B6-202ENST00000478050 EIF5A2Q9GZV4 153 aaKnown RBP4.16□□□□□ -1.74
SF3B6-202ENST00000478050 PARP12Q9H0J9 701 aaKnown RBP4.16□□□□□ -1.74
SF3B6-202ENST00000478050 DEFB127Q9H1M4 99 aa4.16□□□□□ -1.74
SF3B6-202ENST00000478050 SLC35B3Q9H1N7 401 aa4.16□□□□□ -1.74
SF3B6-202ENST00000478050 MEGF9Q9H1U4 602 aa4.16□□□□□ -1.74
SF3B6-202ENST00000478050 SH3BGRL3Q9H299 93 aa4.16□□□□□ -1.74
SF3B6-202ENST00000478050 HIPK2Q9H2X6 1198 aa4.16□□□□□ -1.74
SF3B6-202ENST00000478050 SAV1Q9H4B6 383 aaPredicted RBP4.16□□□□□ -1.74
SF3B6-202ENST00000478050 ZDHHC11Q9H8X9 412 aa4.16□□□□□ -1.74
SF3B6-202ENST00000478050 UNKLQ9H9P5 680 aaKnown RBP4.16□□□□□ -1.74
SF3B6-202ENST00000478050 KCNJ16Q9NPI9 418 aa4.16□□□□□ -1.74
SF3B6-202ENST00000478050 LIN7CQ9NUP9 197 aaKnown RBP4.16□□□□□ -1.74
SF3B6-202ENST00000478050 TMEM140Q9NV12 185 aa4.16□□□□□ -1.74
SF3B6-202ENST00000478050 KIAA1456Q9P272 454 aa4.16□□□□□ -1.74
SF3B6-202ENST00000478050 SPRR3Q9UBC9 169 aa4.16□□□□□ -1.74
SF3B6-202ENST00000478050 HIVEP3Q5T1R4 2406 aa4.15□□□□□ -1.74
SF3B6-202ENST00000478050 HEATR1Q9H583 2144 aaKnown RBP4.15□□□□□ -1.74
SF3B6-202ENST00000478050 C7orf77A4D0Y5 90 aa4.15□□□□□ -1.75
SF3B6-202ENST00000478050 ARGFXA6NJG6 315 aa4.15□□□□□ -1.75
SF3B6-202ENST00000478050 COLCA2A8K830 154 aa4.15□□□□□ -1.75
SF3B6-202ENST00000478050 C1orf196B1AJZ1 125 aa4.15□□□□□ -1.75
SF3B6-202ENST00000478050 FAM90A26D6RGX4 464 aa4.15□□□□□ -1.75
SF3B6-202ENST00000478050 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP4.15□□□□□ -1.75
SF3B6-202ENST00000478050 M0R036 132 aa4.15□□□□□ -1.75
SF3B6-202ENST00000478050 SIRPB1O00241 398 aa4.15□□□□□ -1.75
SF3B6-202ENST00000478050 SLC33A1O00400 549 aaPredicted RBP4.15□□□□□ -1.75
SF3B6-202ENST00000478050 SH2D1BO14796 132 aa4.15□□□□□ -1.75
SF3B6-202ENST00000478050 TXNL1O43396 289 aa4.15□□□□□ -1.75
SF3B6-202ENST00000478050 CHST1O43916 411 aa4.15□□□□□ -1.75
SF3B6-202ENST00000478050 NXPH2O95156 264 aa4.15□□□□□ -1.75
SF3B6-202ENST00000478050 IFNA5P01569 189 aa4.15□□□□□ -1.75
SF3B6-202ENST00000478050 IGHG3P01860 377 aa4.15□□□□□ -1.75
SF3B6-202ENST00000478050 MT-ND4LP03901 98 aa4.15□□□□□ -1.75
SF3B6-202ENST00000478050 CRYBA1P05813 215 aa4.15□□□□□ -1.75
SF3B6-202ENST00000478050 SERPINE2P07093 398 aa4.15□□□□□ -1.75
SF3B6-202ENST00000478050 SNRNP70P08621 437 aaKnown RBP4.15□□□□□ -1.75
SF3B6-202ENST00000478050 PGA5P0DJD9 388 aa4.15□□□□□ -1.75
SF3B6-202ENST00000478050 TUBG1P23258 451 aa4.15□□□□□ -1.75
SF3B6-202ENST00000478050 PTAFRP25105 342 aa4.15□□□□□ -1.75
SF3B6-202ENST00000478050 PPP1CCP36873 323 aaKnown RBP4.15□□□□□ -1.75
SF3B6-202ENST00000478050 SULT1A1P50225 295 aa4.15□□□□□ -1.75
SF3B6-202ENST00000478050 PAX9P55771 341 aa4.15□□□□□ -1.75
SF3B6-202ENST00000478050 TAS2R30P59541 319 aa4.15□□□□□ -1.75
SF3B6-202ENST00000478050 ERVK11-1P61568 191 aa4.15□□□□□ -1.75
SF3B6-202ENST00000478050 RPS16P62249 146 aaKnown RBP4.15□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms