RNA–Protein interactions for RNA: ENST00000477541.1

HLA-DMA-208, Transcript of major histocompatibility complex, class II, DM alpha, humanhuman

Gene HLA-DMA, Length 1,735 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMA-208ENST00000477541 SP9P0CG40 484 aa11.43□□□□□ -0.58
HLA-DMA-208ENST00000477541 RAB4AP20338 218 aa11.43□□□□□ -0.58
HLA-DMA-208ENST00000477541 GZMHP20718 246 aa11.43□□□□□ -0.58
HLA-DMA-208ENST00000477541 ERVS71-1P61550 626 aa11.43□□□□□ -0.58
HLA-DMA-208ENST00000477541 FOXL1Q12952 345 aa11.43□□□□□ -0.58
HLA-DMA-208ENST00000477541 CATR1Q13166 79 aa11.43□□□□□ -0.58
HLA-DMA-208ENST00000477541 USF2Q15853 346 aaPredicted RBP11.43□□□□□ -0.58
HLA-DMA-208ENST00000477541 ACSM6Q6P461 480 aa11.43□□□□□ -0.58
HLA-DMA-208ENST00000477541 BTNL3Q6UXE8 466 aa11.43□□□□□ -0.58
HLA-DMA-208ENST00000477541 FGFRL1Q8N441 504 aa11.43□□□□□ -0.58
HLA-DMA-208ENST00000477541 ZNF645Q8N7E2 425 aa11.43□□□□□ -0.58
HLA-DMA-208ENST00000477541 WDR31Q8NA23 367 aa11.43□□□□□ -0.58
HLA-DMA-208ENST00000477541 OR10P1Q8NGE3 313 aa11.43□□□□□ -0.58
HLA-DMA-208ENST00000477541 OR4F5Q8NH21 305 aa11.43□□□□□ -0.58
HLA-DMA-208ENST00000477541 RDH5Q92781 318 aa11.43□□□□□ -0.58
HLA-DMA-208ENST00000477541 GMPPAQ96IJ6 420 aaPredicted RBP11.43□□□□□ -0.58
HLA-DMA-208ENST00000477541 OR4F4Q96R69 305 aa11.43□□□□□ -0.58
HLA-DMA-208ENST00000477541 PCGF1Q9BSM1 259 aa11.43□□□□□ -0.58
HLA-DMA-208ENST00000477541 RBM7Q9Y580 266 aaKnown RBP11.43□□□□□ -0.58
HLA-DMA-208ENST00000477541 A0A1W2PPQ1 181 aa11.43□□□□□ -0.58
HLA-DMA-208ENST00000477541 TCAPO15273 167 aa11.43□□□□□ -0.58
HLA-DMA-208ENST00000477541 IGKV1D-33P01593 117 aa11.43□□□□□ -0.58
HLA-DMA-208ENST00000477541 IGKV1-33P01594 117 aa11.43□□□□□ -0.58
HLA-DMA-208ENST00000477541 CD55P08174 381 aa11.43□□□□□ -0.58
HLA-DMA-208ENST00000477541 MDKP21741 143 aaPredicted RBP11.43□□□□□ -0.58
HLA-DMA-208ENST00000477541 TUBG1P23258 451 aa11.43□□□□□ -0.58
HLA-DMA-208ENST00000477541 ERVFC1-1P60608 527 aa11.43□□□□□ -0.58
HLA-DMA-208ENST00000477541 PPP1CBP62140 327 aa11.43□□□□□ -0.58
HLA-DMA-208ENST00000477541 WIPI1Q5MNZ9 446 aaPredicted RBP11.43□□□□□ -0.58
HLA-DMA-208ENST00000477541 UNQ6494/PRO21346Q6UXR6 183 aa11.43□□□□□ -0.58
HLA-DMA-208ENST00000477541 DRAM1Q8N682 238 aa11.43□□□□□ -0.58
HLA-DMA-208ENST00000477541 ABHD3Q8WU67 409 aa11.43□□□□□ -0.58
HLA-DMA-208ENST00000477541 FAM216AQ8WUB2 273 aa11.43□□□□□ -0.58
HLA-DMA-208ENST00000477541 RTL8AQ9BWD3 113 aa11.43□□□□□ -0.58
HLA-DMA-208ENST00000477541 ZNF552Q9H707 407 aaPredicted RBP11.43□□□□□ -0.58
HLA-DMA-208ENST00000477541 KCNIP2Q9NS61 270 aa11.43□□□□□ -0.58
HLA-DMA-208ENST00000477541 PPP1R14DQ9NXH3 145 aa11.43□□□□□ -0.58
HLA-DMA-208ENST00000477541 KCNIP1Q9NZI2 227 aa11.43□□□□□ -0.58
HLA-DMA-208ENST00000477541 OR1A1Q9P1Q5 309 aa11.43□□□□□ -0.58
HLA-DMA-208ENST00000477541 RALYQ9UKM9 306 aaKnown RBP11.43□□□□□ -0.58
HLA-DMA-208ENST00000477541 KCNS2Q9ULS6 477 aa11.43□□□□□ -0.58
HLA-DMA-208ENST00000477541 NCKAP5O14513 1909 aa11.42□□□□□ -0.58
HLA-DMA-208ENST00000477541 CHD3Q12873 2000 aaKnown RBP11.42□□□□□ -0.58
HLA-DMA-208ENST00000477541 KIR2DL5BA0A0G2JN68 375 aa11.42□□□□□ -0.58
HLA-DMA-208ENST00000477541 KIR2DL5BA0A0G2JPC4 375 aa11.42□□□□□ -0.58
HLA-DMA-208ENST00000477541 LRRC30A6NM36 301 aa11.42□□□□□ -0.58
HLA-DMA-208ENST00000477541 ZNF705GA8MUZ8 300 aaPredicted RBP11.42□□□□□ -0.58
HLA-DMA-208ENST00000477541 HS3ST1O14792 307 aa11.42□□□□□ -0.58
HLA-DMA-208ENST00000477541 RAB29O14966 203 aa11.42□□□□□ -0.58
HLA-DMA-208ENST00000477541 MPDU1O75352 247 aa11.42□□□□□ -0.58
HLA-DMA-208ENST00000477541 TRAPPC6AO75865 159 aa11.42□□□□□ -0.58
HLA-DMA-208ENST00000477541 GDF1P27539 372 aa11.42□□□□□ -0.58
HLA-DMA-208ENST00000477541 DUSP3P51452 185 aaPredicted RBP11.42□□□□□ -0.58
HLA-DMA-208ENST00000477541 UBE2NP61088 152 aaKnown RBP11.42□□□□□ -0.58
HLA-DMA-208ENST00000477541 GNB2P62879 340 aa11.42□□□□□ -0.58
HLA-DMA-208ENST00000477541 PAX5Q02548 391 aa11.42□□□□□ -0.58
HLA-DMA-208ENST00000477541 P2RY6Q15077 328 aa11.42□□□□□ -0.58
HLA-DMA-208ENST00000477541 FFAR4Q5NUL3 377 aa11.42□□□□□ -0.58
HLA-DMA-208ENST00000477541 C1orf194Q5T5A4 169 aa11.42□□□□□ -0.58
HLA-DMA-208ENST00000477541 LYSMD4Q5XG99 296 aa11.42□□□□□ -0.58
HLA-DMA-208ENST00000477541 TMEM144Q7Z5S9 345 aa11.42□□□□□ -0.58
HLA-DMA-208ENST00000477541 MRPL41Q8IXM3 137 aaKnown RBP11.42□□□□□ -0.58
HLA-DMA-208ENST00000477541 KIR2DL5AQ8N109 375 aa11.42□□□□□ -0.58
HLA-DMA-208ENST00000477541 BATF2Q8N1L9 274 aa11.42□□□□□ -0.58
HLA-DMA-208ENST00000477541 WNT16Q9UBV4 365 aa11.42□□□□□ -0.58
HLA-DMA-208ENST00000477541 TRAPPC2LQ9UL33 140 aa11.42□□□□□ -0.58
HLA-DMA-208ENST00000477541 PPP1R3CQ9UQK1 317 aa11.42□□□□□ -0.58
HLA-DMA-208ENST00000477541 FUT9Q9Y231 359 aa11.42□□□□□ -0.58
HLA-DMA-208ENST00000477541 A0A0G2JMM0 328 aa11.41□□□□□ -0.58
HLA-DMA-208ENST00000477541 A0A1W2PPB8 328 aa11.41□□□□□ -0.58
HLA-DMA-208ENST00000477541 A0A1W2PRS3 328 aa11.41□□□□□ -0.58
HLA-DMA-208ENST00000477541 PMS2P5A8MQ11 134 aa11.41□□□□□ -0.58
HLA-DMA-208ENST00000477541 KIR3DP1A8MWS1 328 aa11.41□□□□□ -0.58
HLA-DMA-208ENST00000477541 M0R143 59 aa11.41□□□□□ -0.58
HLA-DMA-208ENST00000477541 IL18BPO95998 194 aa11.41□□□□□ -0.58
HLA-DMA-208ENST00000477541 OR10J1P30954 320 aa11.41□□□□□ -0.58
HLA-DMA-208ENST00000477541 RPL15P61313 204 aaKnown RBP11.41□□□□□ -0.58
HLA-DMA-208ENST00000477541 FIP1L1Q6UN15 594 aaKnown RBP11.41□□□□□ -0.58
HLA-DMA-208ENST00000477541 C5orf24Q7Z6I8 188 aa11.41□□□□□ -0.58
HLA-DMA-208ENST00000477541 IFI44Q8TCB0 444 aa11.41□□□□□ -0.58
HLA-DMA-208ENST00000477541 IL1F10Q8WWZ1 152 aa11.41□□□□□ -0.58
HLA-DMA-208ENST00000477541 NANOS1Q8WY41 292 aaKnown RBP11.41□□□□□ -0.58
HLA-DMA-208ENST00000477541 NPCDR1Q9BY65 106 aa11.41□□□□□ -0.58
HLA-DMA-208ENST00000477541 SLC25A22Q9H936 323 aa11.41□□□□□ -0.58
HLA-DMA-208ENST00000477541 CRIM1Q9NZV1 1036 aa11.41□□□□□ -0.58
HLA-DMA-208ENST00000477541 B4GALT7Q9UBV7 327 aa11.41□□□□□ -0.58
HLA-DMA-208ENST00000477541 TMEM210A6NLX4 147 aa11.4□□□□□ -0.58
HLA-DMA-208ENST00000477541 NTN3O00634 580 aaPredicted RBP11.4□□□□□ -0.58
HLA-DMA-208ENST00000477541 CLDN14O95500 239 aa11.4□□□□□ -0.58
HLA-DMA-208ENST00000477541 CRYABP02511 175 aaKnown RBP11.4□□□□□ -0.58
HLA-DMA-208ENST00000477541 RFPL3SP0C7P2 107 aa11.4□□□□□ -0.58
HLA-DMA-208ENST00000477541 CCNOP22674 350 aa11.4□□□□□ -0.58
HLA-DMA-208ENST00000477541 CDC34P49427 236 aaPredicted RBP11.4□□□□□ -0.58
HLA-DMA-208ENST00000477541 CYB561P49447 251 aa11.4□□□□□ -0.58
HLA-DMA-208ENST00000477541 ERVK11-1P61568 191 aa11.4□□□□□ -0.58
HLA-DMA-208ENST00000477541 ZNF146Q15072 292 aa11.4□□□□□ -0.58
HLA-DMA-208ENST00000477541 IGFBP7Q16270 282 aa11.4□□□□□ -0.58
HLA-DMA-208ENST00000477541 IZUMO4Q1ZYL8 232 aa11.4□□□□□ -0.58
HLA-DMA-208ENST00000477541 OR8G2PQ6IF36 304 aa11.4□□□□□ -0.58
HLA-DMA-208ENST00000477541 C1orf210Q8IVY1 113 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms