RNA–Protein interactions for RNA: ENST00000477485.1

RTFDC1-206, Transcript of Protein RTF2 homolog, humanhuman

TSL 3

Gene RTFDC1, Length 464 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-206ENST00000477485 LIMS4P0CW20 117 aa5.08□□□□□ -1.6
RTFDC1-206ENST00000477485 CT45A6P0DMU7 189 aa5.08□□□□□ -1.6
RTFDC1-206ENST00000477485 CT45A5P0DMU8 189 aa5.08□□□□□ -1.6
RTFDC1-206ENST00000477485 CT45A7P0DMV0 189 aa5.08□□□□□ -1.6
RTFDC1-206ENST00000477485 MYL12AP19105 171 aa5.08□□□□□ -1.6
RTFDC1-206ENST00000477485 FSTP19883 344 aa5.08□□□□□ -1.6
RTFDC1-206ENST00000477485 CAPGP40121 348 aa5.08□□□□□ -1.6
RTFDC1-206ENST00000477485 LGALS7P47929 136 aa5.08□□□□□ -1.6
RTFDC1-206ENST00000477485 ALDH3A2P51648 485 aa5.08□□□□□ -1.6
RTFDC1-206ENST00000477485 CRIP2P52943 208 aaPredicted RBP5.08□□□□□ -1.6
RTFDC1-206ENST00000477485 DYRK1AQ13627 763 aa5.08□□□□□ -1.6
RTFDC1-206ENST00000477485 KLF5Q13887 457 aaPredicted RBP5.08□□□□□ -1.6
RTFDC1-206ENST00000477485 PSG5Q15238 335 aa5.08□□□□□ -1.6
RTFDC1-206ENST00000477485 Q499Y3 187 aa5.08□□□□□ -1.6
RTFDC1-206ENST00000477485 CCDC58Q4VC31 144 aa5.08□□□□□ -1.6
RTFDC1-206ENST00000477485 FAM71F2Q6NXP2 309 aa5.08□□□□□ -1.6
RTFDC1-206ENST00000477485 CBR4Q8N4T8 237 aa5.08□□□□□ -1.6
RTFDC1-206ENST00000477485 DEFB125Q8N687 156 aa5.08□□□□□ -1.6
RTFDC1-206ENST00000477485 BVESQ8NE79 360 aa5.08□□□□□ -1.6
RTFDC1-206ENST00000477485 LINC00476Q8WZB0 136 aa5.08□□□□□ -1.6
RTFDC1-206ENST00000477485 GHSRQ92847 366 aa5.08□□□□□ -1.6
RTFDC1-206ENST00000477485 SMIM19Q96E16 107 aa5.08□□□□□ -1.6
RTFDC1-206ENST00000477485 OR14A2Q96R54 314 aa5.08□□□□□ -1.6
RTFDC1-206ENST00000477485 TSNAXQ99598 290 aaKnown RBP5.08□□□□□ -1.6
RTFDC1-206ENST00000477485 SULT4A1Q9BR01 284 aa5.08□□□□□ -1.6
RTFDC1-206ENST00000477485 FAAP24Q9BTP7 215 aa5.08□□□□□ -1.6
RTFDC1-206ENST00000477485 ST6GALNAC5Q9BVH7 336 aa5.08□□□□□ -1.6
RTFDC1-206ENST00000477485 MBNL3Q9NUK0 354 aaKnown RBP5.08□□□□□ -1.6
RTFDC1-206ENST00000477485 PEMTQ9UBM1 199 aa5.08□□□□□ -1.6
RTFDC1-206ENST00000477485 PEF1Q9UBV8 284 aaKnown RBP5.08□□□□□ -1.6
RTFDC1-206ENST00000477485 SELENOKQ9Y6D0 94 aa5.08□□□□□ -1.6
RTFDC1-206ENST00000477485 HUWE1Q7Z6Z7 4374 aaKnown RBP5.08□□□□□ -1.6
RTFDC1-206ENST00000477485 A6NJY4 79 aa5.07□□□□□ -1.6
RTFDC1-206ENST00000477485 FAM90A7PA6NKC0 464 aa5.07□□□□□ -1.6
RTFDC1-206ENST00000477485 FAM90A23PA8MXZ1 464 aa5.07□□□□□ -1.6
RTFDC1-206ENST00000477485 OR11H12B2RN74 326 aa5.07□□□□□ -1.6
RTFDC1-206ENST00000477485 DYNC1I1O14576 645 aa5.07□□□□□ -1.6
RTFDC1-206ENST00000477485 GPX5O75715 221 aa5.07□□□□□ -1.6
RTFDC1-206ENST00000477485 SC5DO75845 299 aa5.07□□□□□ -1.6
RTFDC1-206ENST00000477485 IGKV1-16P04430 117 aa5.07□□□□□ -1.6
RTFDC1-206ENST00000477485 CSN3P07498 182 aa5.07□□□□□ -1.6
RTFDC1-206ENST00000477485 CD7P09564 240 aa5.07□□□□□ -1.6
RTFDC1-206ENST00000477485 IGFBP3P17936 291 aaPredicted RBP5.07□□□□□ -1.6
RTFDC1-206ENST00000477485 AADACP22760 399 aa5.07□□□□□ -1.6
RTFDC1-206ENST00000477485 CEACAM6P40199 344 aa5.07□□□□□ -1.6
RTFDC1-206ENST00000477485 RASSF2P50749 326 aa5.07□□□□□ -1.6
RTFDC1-206ENST00000477485 CBX3Q13185 183 aa5.07□□□□□ -1.6
RTFDC1-206ENST00000477485 HMGN3Q15651 99 aa5.07□□□□□ -1.6
RTFDC1-206ENST00000477485 SMN1Q16637 294 aaKnown RBP5.07□□□□□ -1.6
RTFDC1-206ENST00000477485 MOGAT2Q3SYC2 334 aa5.07□□□□□ -1.6
RTFDC1-206ENST00000477485 YIF1BQ5BJH7 314 aa5.07□□□□□ -1.6
RTFDC1-206ENST00000477485 SIGIRRQ6IA17 410 aa5.07□□□□□ -1.6
RTFDC1-206ENST00000477485 ZNF562Q6V9R5 426 aa5.07□□□□□ -1.6
RTFDC1-206ENST00000477485 C6orf201Q7Z4U5 140 aa5.07□□□□□ -1.6
RTFDC1-206ENST00000477485 ZNF554Q86TJ5 538 aa5.07□□□□□ -1.6
RTFDC1-206ENST00000477485 GAPTQ8N292 157 aa5.07□□□□□ -1.6
RTFDC1-206ENST00000477485 Q96M66 194 aa5.07□□□□□ -1.6
RTFDC1-206ENST00000477485 PARP12Q9H0J9 701 aaKnown RBP5.07□□□□□ -1.6
RTFDC1-206ENST00000477485 OR1A1Q9P1Q5 309 aa5.07□□□□□ -1.6
RTFDC1-206ENST00000477485 ZNF221Q9UK13 617 aa5.07□□□□□ -1.6
RTFDC1-206ENST00000477485 LRRC42Q9Y546 428 aa5.07□□□□□ -1.6
RTFDC1-206ENST00000477485 TRBV5-5A0A0J9YX44 114 aa5.06□□□□□ -1.6
RTFDC1-206ENST00000477485 LOC100130705A0A1B0GUX0 176 aa5.06□□□□□ -1.6
RTFDC1-206ENST00000477485 H3BUA1 57 aa5.06□□□□□ -1.6
RTFDC1-206ENST00000477485 M0R1X1 148 aa5.06□□□□□ -1.6
RTFDC1-206ENST00000477485 OR2A4O95047 310 aa5.06□□□□□ -1.6
RTFDC1-206ENST00000477485 SPDEFO95238 335 aa5.06□□□□□ -1.6
RTFDC1-206ENST00000477485 GABRB1P18505 474 aa5.06□□□□□ -1.6
RTFDC1-206ENST00000477485 ZBTB25P24278 435 aa5.06□□□□□ -1.6
RTFDC1-206ENST00000477485 LINC00205P59089 165 aa5.06□□□□□ -1.6
RTFDC1-206ENST00000477485 MED21Q13503 144 aa5.06□□□□□ -1.6
RTFDC1-206ENST00000477485 EXOSC2Q13868 293 aaKnown RBP5.06□□□□□ -1.6
RTFDC1-206ENST00000477485 TNXAQ16473 311 aa5.06□□□□□ -1.6
RTFDC1-206ENST00000477485 CD300EQ496F6 205 aaPredicted RBP5.06□□□□□ -1.6
RTFDC1-206ENST00000477485 OR10K2Q6IF99 312 aa5.06□□□□□ -1.6
RTFDC1-206ENST00000477485 IL34Q6ZMJ4 242 aa5.06□□□□□ -1.6
RTFDC1-206ENST00000477485 SVOPQ8N4V2 548 aa5.06□□□□□ -1.6
RTFDC1-206ENST00000477485 NKAIN3Q8N8D7 197 aa5.06□□□□□ -1.6
RTFDC1-206ENST00000477485 ZNF555Q8NEP9 628 aa5.06□□□□□ -1.6
RTFDC1-206ENST00000477485 RHOXF1Q8NHV9 184 aa5.06□□□□□ -1.6
RTFDC1-206ENST00000477485 EDARADDQ8WWZ3 215 aa5.06□□□□□ -1.6
RTFDC1-206ENST00000477485 ACOT12Q8WYK0 555 aa5.06□□□□□ -1.6
RTFDC1-206ENST00000477485 THRSPQ92748 146 aa5.06□□□□□ -1.6
RTFDC1-206ENST00000477485 SNAPC3Q92966 411 aa5.06□□□□□ -1.6
RTFDC1-206ENST00000477485 HARBI1Q96MB7 349 aa5.06□□□□□ -1.6
RTFDC1-206ENST00000477485 THAP7Q9BT49 309 aaPredicted RBP5.06□□□□□ -1.6
RTFDC1-206ENST00000477485 TMEM59Q9BXS4 323 aa5.06□□□□□ -1.6
RTFDC1-206ENST00000477485 TINAGL1Q9GZM7 467 aaPredicted RBP5.06□□□□□ -1.6
RTFDC1-206ENST00000477485 KCNK15Q9H427 330 aa5.06□□□□□ -1.6
RTFDC1-206ENST00000477485 FGF20Q9NP95 211 aaPredicted RBP5.06□□□□□ -1.6
RTFDC1-206ENST00000477485 SLC35D1Q9NTN3 355 aa5.06□□□□□ -1.6
RTFDC1-206ENST00000477485 PLEKHJ1Q9NW61 149 aa5.06□□□□□ -1.6
RTFDC1-206ENST00000477485 BABAM2Q9NXR7 383 aa5.06□□□□□ -1.6
RTFDC1-206ENST00000477485 IRGMA1A4Y4 181 aa5.05□□□□□ -1.6
RTFDC1-206ENST00000477485 NUPR2A6NF83 97 aa5.05□□□□□ -1.6
RTFDC1-206ENST00000477485 SHOXO15266 292 aa5.05□□□□□ -1.6
RTFDC1-206ENST00000477485 OGG1O15527 345 aa5.05□□□□□ -1.6
RTFDC1-206ENST00000477485 AIREO43918 545 aa5.05□□□□□ -1.6
RTFDC1-206ENST00000477485 TUSC2O75896 110 aa5.05□□□□□ -1.6
RTFDC1-206ENST00000477485 LALBAP00709 142 aa5.05□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms