RNA–Protein interactions for RNA: ENST00000476739.5

HDAC3-208, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 422 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-208ENST00000476739 FAM106CPP0CH98 169 aa7.73□□□□□ -1.17
HDAC3-208ENST00000476739 IL3RAP26951 378 aa7.73□□□□□ -1.17
HDAC3-208ENST00000476739 KIR2DS4P43632 304 aa7.73□□□□□ -1.17
HDAC3-208ENST00000476739 RAB25P57735 213 aa7.73□□□□□ -1.17
HDAC3-208ENST00000476739 EBI3Q14213 229 aa7.73□□□□□ -1.17
HDAC3-208ENST00000476739 HES1Q14469 280 aa7.73□□□□□ -1.17
HDAC3-208ENST00000476739 RPL39P5Q59GN2 51 aa7.73□□□□□ -1.17
HDAC3-208ENST00000476739 STEAP3Q658P3 488 aa7.73□□□□□ -1.17
HDAC3-208ENST00000476739 THNSL2Q86YJ6 484 aa7.73□□□□□ -1.17
HDAC3-208ENST00000476739 TGIF2LXQ8IUE1 241 aa7.73□□□□□ -1.17
HDAC3-208ENST00000476739 SAMD12Q8N8I0 201 aa7.73□□□□□ -1.17
HDAC3-208ENST00000476739 OR2AK2Q8NG84 335 aa7.73□□□□□ -1.17
HDAC3-208ENST00000476739 OR4A4PQ8NGN8 299 aa7.73□□□□□ -1.17
HDAC3-208ENST00000476739 OR4C13Q8NGP0 309 aa7.73□□□□□ -1.17
HDAC3-208ENST00000476739 ABHD14BQ96IU4 210 aa7.73□□□□□ -1.17
HDAC3-208ENST00000476739 ZNF251Q9BRH9 671 aa7.73□□□□□ -1.17
HDAC3-208ENST00000476739 CCDC32Q9BV29 185 aa7.73□□□□□ -1.17
HDAC3-208ENST00000476739 ST6GALNAC5Q9BVH7 336 aa7.73□□□□□ -1.17
HDAC3-208ENST00000476739 MRPL20Q9BYC9 149 aaKnown RBP7.73□□□□□ -1.17
HDAC3-208ENST00000476739 NPFFR1Q9GZQ6 430 aa7.73□□□□□ -1.17
HDAC3-208ENST00000476739 ABCG5Q9H222 651 aa7.73□□□□□ -1.17
HDAC3-208ENST00000476739 DCSTAMPQ9H295 470 aa7.73□□□□□ -1.17
HDAC3-208ENST00000476739 RANBP3Q9H6Z4 567 aaPredicted RBP7.73□□□□□ -1.17
HDAC3-208ENST00000476739 ZC4H2Q9NQZ6 224 aa7.73□□□□□ -1.17
HDAC3-208ENST00000476739 RDH8Q9NYR8 311 aa7.73□□□□□ -1.17
HDAC3-208ENST00000476739 COMMD3Q9UBI1 195 aa7.73□□□□□ -1.17
HDAC3-208ENST00000476739 RNF150Q9ULK6 438 aa7.73□□□□□ -1.17
HDAC3-208ENST00000476739 MGAT4AQ9UM21 535 aa7.73□□□□□ -1.17
HDAC3-208ENST00000476739 TRBV6-7A0A0A0MS04 114 aa7.72□□□□□ -1.17
HDAC3-208ENST00000476739 A0A1B0GUS0 222 aa7.72□□□□□ -1.17
HDAC3-208ENST00000476739 HMX3A6NHT5 357 aa7.72□□□□□ -1.17
HDAC3-208ENST00000476739 HSPA12AO43301 675 aa7.72□□□□□ -1.17
HDAC3-208ENST00000476739 LANCL1O43813 399 aa7.72□□□□□ -1.17
HDAC3-208ENST00000476739 TMEM127O75204 238 aa7.72□□□□□ -1.17
HDAC3-208ENST00000476739 S100A6P06703 90 aa7.72□□□□□ -1.17
HDAC3-208ENST00000476739 FCER2P06734 321 aa7.72□□□□□ -1.17
HDAC3-208ENST00000476739 TMEM11P17152 192 aa7.72□□□□□ -1.17
HDAC3-208ENST00000476739 DTYMKP23919 212 aa7.72□□□□□ -1.17
HDAC3-208ENST00000476739 ZBTB25P24278 435 aa7.72□□□□□ -1.17
HDAC3-208ENST00000476739 TALDO1P37837 337 aa7.72□□□□□ -1.17
HDAC3-208ENST00000476739 CBX5P45973 191 aa7.72□□□□□ -1.17
HDAC3-208ENST00000476739 ARHGDIBP52566 201 aa7.72□□□□□ -1.17
HDAC3-208ENST00000476739 ARL6IP1Q15041 203 aa7.72□□□□□ -1.17
HDAC3-208ENST00000476739 SRSF7Q16629 238 aaKnown RBP eCLIP7.72□□□□□ -1.17
HDAC3-208ENST00000476739 PNLIPRP3Q17RR3 467 aa7.72□□□□□ -1.17
HDAC3-208ENST00000476739 UBE2NLQ5JXB2 153 aa7.72□□□□□ -1.17
HDAC3-208ENST00000476739 GLDNQ6ZMI3 551 aaPredicted RBP7.72□□□□□ -1.17
HDAC3-208ENST00000476739 Q6ZS49 121 aa7.72□□□□□ -1.17
HDAC3-208ENST00000476739 ZNF833PQ6ZTB9 187 aa7.72□□□□□ -1.17
HDAC3-208ENST00000476739 Q8N2B8 174 aa7.72□□□□□ -1.17
HDAC3-208ENST00000476739 MFSD4AQ8N468 514 aa7.72□□□□□ -1.17
HDAC3-208ENST00000476739 Q8N6K4 173 aa7.72□□□□□ -1.17
HDAC3-208ENST00000476739 GVQW1Q8N7I0 195 aa7.72□□□□□ -1.17
HDAC3-208ENST00000476739 EAF1Q96JC9 268 aaPredicted RBP7.72□□□□□ -1.17
HDAC3-208ENST00000476739 RITA1Q96K30 269 aa7.72□□□□□ -1.17
HDAC3-208ENST00000476739 CABLES2Q9BTV7 478 aa7.72□□□□□ -1.17
HDAC3-208ENST00000476739 AUNIPQ9H7T9 357 aa7.72□□□□□ -1.17
HDAC3-208ENST00000476739 SERTAD4Q9NUC0 356 aa7.72□□□□□ -1.17
HDAC3-208ENST00000476739 A0A0A6YYH2 397 aa7.71□□□□□ -1.18
HDAC3-208ENST00000476739 MEIS3P1A6NDR6 274 aa7.71□□□□□ -1.18
HDAC3-208ENST00000476739 A6NJ64 397 aa7.71□□□□□ -1.18
HDAC3-208ENST00000476739 ITGB1BP1O14713 200 aa7.71□□□□□ -1.18
HDAC3-208ENST00000476739 RAB29O14966 203 aa7.71□□□□□ -1.18
HDAC3-208ENST00000476739 XRCC3O43542 346 aa7.71□□□□□ -1.18
HDAC3-208ENST00000476739 HPGDSO60760 199 aa7.71□□□□□ -1.18
HDAC3-208ENST00000476739 SCGNO76038 276 aa7.71□□□□□ -1.18
HDAC3-208ENST00000476739 CT45A6P0DMU7 189 aa7.71□□□□□ -1.18
HDAC3-208ENST00000476739 CT45A5P0DMU8 189 aa7.71□□□□□ -1.18
HDAC3-208ENST00000476739 CT45A7P0DMV0 189 aa7.71□□□□□ -1.18
HDAC3-208ENST00000476739 CD1BP29016 333 aa7.71□□□□□ -1.18
HDAC3-208ENST00000476739 RORCP51449 518 aa7.71□□□□□ -1.18
HDAC3-208ENST00000476739 F2RL1P55085 397 aa7.71□□□□□ -1.18
HDAC3-208ENST00000476739 LINC00205P59089 165 aa7.71□□□□□ -1.18
HDAC3-208ENST00000476739 KIR2DS1Q14954 304 aa7.71□□□□□ -1.18
HDAC3-208ENST00000476739 ABCA11PQ4W5N1 156 aa7.71□□□□□ -1.18
HDAC3-208ENST00000476739 C16orf82Q7Z2V1 217 aa7.71□□□□□ -1.18
HDAC3-208ENST00000476739 LYSMD2Q8IV50 215 aa7.71□□□□□ -1.18
HDAC3-208ENST00000476739 C5orf56Q8N8D9 126 aa7.71□□□□□ -1.18
HDAC3-208ENST00000476739 POC5Q8NA72 575 aa7.71□□□□□ -1.18
HDAC3-208ENST00000476739 OR6F1Q8NGZ6 308 aa7.71□□□□□ -1.18
HDAC3-208ENST00000476739 OR2T6Q8NHC8 308 aa7.71□□□□□ -1.18
HDAC3-208ENST00000476739 PHF21AQ96BD5 680 aa7.71□□□□□ -1.18
HDAC3-208ENST00000476739 KCTD12Q96CX2 325 aaKnown RBP7.71□□□□□ -1.18
HDAC3-208ENST00000476739 S100A16Q96FQ6 103 aaKnown RBP7.71□□□□□ -1.18
HDAC3-208ENST00000476739 C5orf30Q96GV9 206 aa7.71□□□□□ -1.18
HDAC3-208ENST00000476739 CITED1Q99966 193 aa7.71□□□□□ -1.18
HDAC3-208ENST00000476739 NABP2Q9BQ15 211 aa7.71□□□□□ -1.18
HDAC3-208ENST00000476739 PRSS22Q9GZN4 317 aa7.71□□□□□ -1.18
HDAC3-208ENST00000476739 TOLLIPQ9H0E2 274 aa7.71□□□□□ -1.18
HDAC3-208ENST00000476739 PLSCR3Q9NRY6 295 aa7.71□□□□□ -1.18
HDAC3-208ENST00000476739 MOB4Q9Y3A3 225 aa7.71□□□□□ -1.18
HDAC3-208ENST00000476739 LINC01548A6NM66 108 aa7.7□□□□□ -1.18
HDAC3-208ENST00000476739 LPLP06858 475 aa7.7□□□□□ -1.18
HDAC3-208ENST00000476739 OR8U9P0C7N5 309 aa7.7□□□□□ -1.18
HDAC3-208ENST00000476739 VSIG10L2P0DP72 767 aa7.7□□□□□ -1.18
HDAC3-208ENST00000476739 ELK1P19419 428 aa7.7□□□□□ -1.18
HDAC3-208ENST00000476739 CNTFRP26992 372 aa7.7□□□□□ -1.18
HDAC3-208ENST00000476739 TAS2R20P59543 309 aa7.7□□□□□ -1.18
HDAC3-208ENST00000476739 PITPNAQ00169 270 aa7.7□□□□□ -1.18
HDAC3-208ENST00000476739 C11orf88Q6PI97 169 aa7.7□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms