RNA–Protein interactions for RNA: ENST00000476387.1

COL1A1-205, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 600 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-205ENST00000476387 ZNF230Q9UIE0 474 aaPredicted RBP12.75□□□□□ -0.37
COL1A1-205ENST00000476387 ZNF107Q9UII5 783 aaPredicted RBP12.75□□□□□ -0.37
COL1A1-205ENST00000476387 RNF150Q9ULK6 438 aa12.75□□□□□ -0.37
COL1A1-205ENST00000476387 ETV7Q9Y603 341 aa12.75□□□□□ -0.37
COL1A1-205ENST00000476387 H7C2Y5 167 aa12.74□□□□□ -0.37
COL1A1-205ENST00000476387 GSTP1P09211 210 aaKnown RBP12.74□□□□□ -0.37
COL1A1-205ENST00000476387 GSTT2P0CG29 244 aa12.74□□□□□ -0.37
COL1A1-205ENST00000476387 GSTT2BP0CG30 244 aa12.74□□□□□ -0.37
COL1A1-205ENST00000476387 CT45A6P0DMU7 189 aa12.74□□□□□ -0.37
COL1A1-205ENST00000476387 CT45A5P0DMU8 189 aa12.74□□□□□ -0.37
COL1A1-205ENST00000476387 CT45A7P0DMV0 189 aa12.74□□□□□ -0.37
COL1A1-205ENST00000476387 VDAC1P21796 283 aa12.74□□□□□ -0.37
COL1A1-205ENST00000476387 DTYMKP23919 212 aa12.74□□□□□ -0.37
COL1A1-205ENST00000476387 MC5RP33032 325 aa12.74□□□□□ -0.37
COL1A1-205ENST00000476387 SCAND1P57086 179 aa12.74□□□□□ -0.37
COL1A1-205ENST00000476387 RPL23AP62750 156 aaKnown RBP12.74□□□□□ -0.37
COL1A1-205ENST00000476387 CDNFQ49AH0 187 aa12.74□□□□□ -0.37
COL1A1-205ENST00000476387 IGSF11Q5DX21 431 aa12.74□□□□□ -0.37
COL1A1-205ENST00000476387 GLDNQ6ZMI3 551 aaPredicted RBP12.74□□□□□ -0.37
COL1A1-205ENST00000476387 LINC00482Q8N8I6 264 aa12.74□□□□□ -0.37
COL1A1-205ENST00000476387 HSPB9Q9BQS6 159 aa12.74□□□□□ -0.37
COL1A1-205ENST00000476387 ZFP57Q9NU63 452 aa12.74□□□□□ -0.37
COL1A1-205ENST00000476387 WASHC3Q9Y3C0 194 aa12.74□□□□□ -0.37
COL1A1-205ENST00000476387 LINC01548A6NM66 108 aa12.73□□□□□ -0.37
COL1A1-205ENST00000476387 NUDT19A8MXV4 375 aa12.73□□□□□ -0.37
COL1A1-205ENST00000476387 H0YJW9 148 aa12.73□□□□□ -0.37
COL1A1-205ENST00000476387 AIREO43918 545 aa12.73□□□□□ -0.37
COL1A1-205ENST00000476387 APOA2P02652 100 aa12.73□□□□□ -0.37
COL1A1-205ENST00000476387 CNTFRP26992 372 aa12.73□□□□□ -0.37
COL1A1-205ENST00000476387 GNG2P59768 71 aa12.73□□□□□ -0.37
COL1A1-205ENST00000476387 PITPNAQ00169 270 aa12.73□□□□□ -0.37
COL1A1-205ENST00000476387 SRSF7Q16629 238 aaKnown RBP eCLIP12.73□□□□□ -0.37
COL1A1-205ENST00000476387 HACD4Q5VWC8 232 aa12.73□□□□□ -0.37
COL1A1-205ENST00000476387 TEX38Q6PEX7 206 aa12.73□□□□□ -0.37
COL1A1-205ENST00000476387 ETV3LQ6ZN32 361 aa12.73□□□□□ -0.37
COL1A1-205ENST00000476387 ZNF436-AS1Q8NC38 126 aaPredicted RBP12.73□□□□□ -0.37
COL1A1-205ENST00000476387 OR2D2Q9H210 308 aa12.73□□□□□ -0.37
COL1A1-205ENST00000476387 RBM7Q9Y580 266 aaKnown RBP12.73□□□□□ -0.37
COL1A1-205ENST00000476387 TRBV6-7A0A0A0MS04 114 aa12.72□□□□□ -0.37
COL1A1-205ENST00000476387 TMEM235A6NFC5 223 aa12.72□□□□□ -0.37
COL1A1-205ENST00000476387 RBBP9O75884 186 aa12.72□□□□□ -0.37
COL1A1-205ENST00000476387 HLA-DRB1P01911 266 aa12.72□□□□□ -0.37
COL1A1-205ENST00000476387 TFAP2AP05549 437 aa12.72□□□□□ -0.37
COL1A1-205ENST00000476387 OR5H8P0DN80 308 aa12.72□□□□□ -0.37
COL1A1-205ENST00000476387 THBS3P49746 956 aa12.72□□□□□ -0.37
COL1A1-205ENST00000476387 EGFEM1PQ0D2K5 195 aa12.72□□□□□ -0.37
COL1A1-205ENST00000476387 PLGLAQ15195 96 aa12.72□□□□□ -0.37
COL1A1-205ENST00000476387 PNLIPRP3Q17RR3 467 aa12.72□□□□□ -0.37
COL1A1-205ENST00000476387 C5orf64Q2M2E5 130 aa12.72□□□□□ -0.37
COL1A1-205ENST00000476387 CXorf66Q5JRM2 361 aaPredicted RBP12.72□□□□□ -0.37
COL1A1-205ENST00000476387 Q6ZS49 121 aa12.72□□□□□ -0.37
COL1A1-205ENST00000476387 CROCCP3Q8IVE0 287 aa12.72□□□□□ -0.37
COL1A1-205ENST00000476387 MRPL41Q8IXM3 137 aaKnown RBP12.72□□□□□ -0.37
COL1A1-205ENST00000476387 NPBQ8NG41 125 aa12.72□□□□□ -0.37
COL1A1-205ENST00000476387 NUDCD2Q8WVJ2 157 aa12.72□□□□□ -0.37
COL1A1-205ENST00000476387 TOLLIPQ9H0E2 274 aa12.72□□□□□ -0.37
COL1A1-205ENST00000476387 ELF5Q9UKW6 265 aaPredicted RBP12.72□□□□□ -0.37
COL1A1-205ENST00000476387 M0R1X1 148 aa12.71□□□□□ -0.37
COL1A1-205ENST00000476387 TMEM127O75204 238 aa12.71□□□□□ -0.37
COL1A1-205ENST00000476387 NDUFA3O95167 84 aa12.71□□□□□ -0.37
COL1A1-205ENST00000476387 OR8U9P0C7N5 309 aa12.71□□□□□ -0.37
COL1A1-205ENST00000476387 MYCNOSP40205 109 aa12.71□□□□□ -0.37
COL1A1-205ENST00000476387 DRAXINQ8NBI3 349 aaPredicted RBP12.71□□□□□ -0.37
COL1A1-205ENST00000476387 OR5AN1Q8NGI8 311 aa12.71□□□□□ -0.37
COL1A1-205ENST00000476387 OR5H6Q8NGV6 325 aa12.71□□□□□ -0.37
COL1A1-205ENST00000476387 OR8U1Q8NH10 309 aa12.71□□□□□ -0.37
COL1A1-205ENST00000476387 YIPF6Q96EC8 236 aa12.71□□□□□ -0.37
COL1A1-205ENST00000476387 RITA1Q96K30 269 aa12.71□□□□□ -0.37
COL1A1-205ENST00000476387 MCRIP2Q9BUT9 160 aaKnown RBP12.71□□□□□ -0.37
COL1A1-205ENST00000476387 ST6GALNAC5Q9BVH7 336 aa12.71□□□□□ -0.37
COL1A1-205ENST00000476387 PARP11Q9NR21 331 aa12.71□□□□□ -0.37
COL1A1-205ENST00000476387 K7EIL1 84 aa12.7□□□□□ -0.38
COL1A1-205ENST00000476387 IGF1P05019 195 aa12.7□□□□□ -0.38
COL1A1-205ENST00000476387 LSM3P62310 102 aaKnown RBP12.7□□□□□ -0.38
COL1A1-205ENST00000476387 FOXE3Q13461 319 aa12.7□□□□□ -0.38
COL1A1-205ENST00000476387 ZNF260Q3ZCT1 412 aa12.7□□□□□ -0.38
COL1A1-205ENST00000476387 LIN54Q6MZP7 749 aa12.7□□□□□ -0.38
COL1A1-205ENST00000476387 PDPNQ86YL7 162 aa12.7□□□□□ -0.38
COL1A1-205ENST00000476387 KLHL30-AS1Q8NEE0 82 aa12.7□□□□□ -0.38
COL1A1-205ENST00000476387 DPF1Q92782 380 aa12.7□□□□□ -0.38
COL1A1-205ENST00000476387 SLC25A38Q96DW6 304 aa12.7□□□□□ -0.38
COL1A1-205ENST00000476387 RNF5Q99942 180 aa12.7□□□□□ -0.38
COL1A1-205ENST00000476387 DCSTAMPQ9H295 470 aa12.7□□□□□ -0.38
COL1A1-205ENST00000476387 OR51J1Q9H342 316 aa12.7□□□□□ -0.38
COL1A1-205ENST00000476387 ZNF580Q9UK33 172 aa12.7□□□□□ -0.38
COL1A1-205ENST00000476387 IGKV1D-8A0A087WSZ0 117 aa12.69□□□□□ -0.38
COL1A1-205ENST00000476387 A0A0A6YYH2 397 aa12.69□□□□□ -0.38
COL1A1-205ENST00000476387 A6NJ64 397 aa12.69□□□□□ -0.38
COL1A1-205ENST00000476387 RRHO14718 337 aa12.69□□□□□ -0.38
COL1A1-205ENST00000476387 ELANEP08246 267 aa12.69□□□□□ -0.38
COL1A1-205ENST00000476387 CTXN2P0C2S0 81 aa12.69□□□□□ -0.38
COL1A1-205ENST00000476387 TGFBR1P36897 503 aa12.69□□□□□ -0.38
COL1A1-205ENST00000476387 KRTAP10-11P60412 298 aa12.69□□□□□ -0.38
COL1A1-205ENST00000476387 CBX3Q13185 183 aa12.69□□□□□ -0.38
COL1A1-205ENST00000476387 C8orf86Q6ZUL3 223 aa12.69□□□□□ -0.38
COL1A1-205ENST00000476387 ZNF695Q8IW36 515 aa12.69□□□□□ -0.38
COL1A1-205ENST00000476387 ZNF383Q8NA42 475 aa12.69□□□□□ -0.38
COL1A1-205ENST00000476387 P2RX4Q99571 388 aa12.69□□□□□ -0.38
COL1A1-205ENST00000476387 TSNAXQ99598 290 aaKnown RBP12.69□□□□□ -0.38
COL1A1-205ENST00000476387 FBXL15Q9H469 300 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms