RNA–Protein interactions for RNA: ENST00000475329.5

TRAF4-210, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-210ENST00000475329 HMSDA8MTL9 139 aa11.26□□□□□ -0.61
TRAF4-210ENST00000475329 SNAPC5O75971 98 aa11.26□□□□□ -0.61
TRAF4-210ENST00000475329 MPC2O95563 127 aa11.26□□□□□ -0.61
TRAF4-210ENST00000475329 IGHV2-5P01817 119 aa11.26□□□□□ -0.61
TRAF4-210ENST00000475329 LIPFP07098 398 aa11.26□□□□□ -0.61
TRAF4-210ENST00000475329 PET100P0DJ07 73 aa11.26□□□□□ -0.61
TRAF4-210ENST00000475329 SAA2P0DJI9 122 aaPredicted RBP11.26□□□□□ -0.61
TRAF4-210ENST00000475329 IGHV1-8P0DP01 117 aa11.26□□□□□ -0.61
TRAF4-210ENST00000475329 SLC25A4P12235 298 aa11.26□□□□□ -0.61
TRAF4-210ENST00000475329 VDAC1P21796 283 aa11.26□□□□□ -0.61
TRAF4-210ENST00000475329 PSMB6P28072 239 aa11.26□□□□□ -0.61
TRAF4-210ENST00000475329 RPL39P5Q59GN2 51 aa11.26□□□□□ -0.61
TRAF4-210ENST00000475329 C11orf87Q6NUJ2 197 aa11.26□□□□□ -0.61
TRAF4-210ENST00000475329 ZNF295-AS1Q8N0V1 137 aa11.26□□□□□ -0.61
TRAF4-210ENST00000475329 LYG1Q8N1E2 194 aa11.26□□□□□ -0.61
TRAF4-210ENST00000475329 LY6G5BQ8NDX9 201 aa11.26□□□□□ -0.61
TRAF4-210ENST00000475329 RNASE11Q8TAA1 199 aaKnown RBP11.26□□□□□ -0.61
TRAF4-210ENST00000475329 THAP6Q8TBB0 222 aa11.26□□□□□ -0.61
TRAF4-210ENST00000475329 PIMREGQ9BSJ6 248 aa11.26□□□□□ -0.61
TRAF4-210ENST00000475329 BPESC1Q9GZL8 116 aa11.26□□□□□ -0.61
TRAF4-210ENST00000475329 HSPB11Q9Y547 144 aa11.26□□□□□ -0.61
TRAF4-210ENST00000475329 LOC105371242A0A075B767 164 aa11.25□□□□□ -0.61
TRAF4-210ENST00000475329 LINC00473A8K010 186 aa11.25□□□□□ -0.61
TRAF4-210ENST00000475329 C22orf46C9J442 243 aa11.25□□□□□ -0.61
TRAF4-210ENST00000475329 DUTP33316 252 aaKnown RBP11.25□□□□□ -0.61
TRAF4-210ENST00000475329 KIR2DS2P43631 304 aa11.25□□□□□ -0.61
TRAF4-210ENST00000475329 LPAR6P43657 344 aa11.25□□□□□ -0.61
TRAF4-210ENST00000475329 AKR1C2P52895 323 aa11.25□□□□□ -0.61
TRAF4-210ENST00000475329 ATP5J2P56134 94 aa11.25□□□□□ -0.61
TRAF4-210ENST00000475329 ERVFRD-1P60508 538 aa11.25□□□□□ -0.61
TRAF4-210ENST00000475329 S100A10P60903 97 aa11.25□□□□□ -0.61
TRAF4-210ENST00000475329 IL15RAQ13261 267 aa11.25□□□□□ -0.61
TRAF4-210ENST00000475329 ZNF585BQ52M93 769 aa11.25□□□□□ -0.61
TRAF4-210ENST00000475329 NMSQ5H8A3 153 aa11.25□□□□□ -0.61
TRAF4-210ENST00000475329 OR2B11Q5JQS5 317 aa11.25□□□□□ -0.61
TRAF4-210ENST00000475329 THOC7Q6I9Y2 204 aaKnown RBP11.25□□□□□ -0.61
TRAF4-210ENST00000475329 LAMTOR1Q6IAA8 161 aa11.25□□□□□ -0.61
TRAF4-210ENST00000475329 SPAG16Q8N0X2 631 aa11.25□□□□□ -0.61
TRAF4-210ENST00000475329 CD300LFQ8TDQ1 290 aa11.25□□□□□ -0.61
TRAF4-210ENST00000475329 ADTRPQ96IZ2 230 aa11.25□□□□□ -0.61
TRAF4-210ENST00000475329 S1PR3Q99500 378 aa11.25□□□□□ -0.61
TRAF4-210ENST00000475329 TMEM133Q9H2Q1 129 aa11.25□□□□□ -0.61
TRAF4-210ENST00000475329 ASH1LQ9NR48 2969 aaKnown RBP11.25□□□□□ -0.61
TRAF4-210ENST00000475329 PLSCR3Q9NRY6 295 aa11.25□□□□□ -0.61
TRAF4-210ENST00000475329 MBD2Q9UBB5 411 aa11.25□□□□□ -0.61
TRAF4-210ENST00000475329 ONECUT1Q9UBC0 465 aa11.25□□□□□ -0.61
TRAF4-210ENST00000475329 PRELID3BQ9Y3B1 194 aa11.25□□□□□ -0.61
TRAF4-210ENST00000475329 DCHS2Q6V1P9 2916 aa11.25□□□□□ -0.61
TRAF4-210ENST00000475329 NDUFS8O00217 210 aa11.24□□□□□ -0.61
TRAF4-210ENST00000475329 ARPC5O15511 151 aa11.24□□□□□ -0.61
TRAF4-210ENST00000475329 PROP1O75360 226 aa11.24□□□□□ -0.61
TRAF4-210ENST00000475329 ATG12O94817 140 aa11.24□□□□□ -0.61
TRAF4-210ENST00000475329 IGKV1-39P01597 117 aa11.24□□□□□ -0.61
TRAF4-210ENST00000475329 IGKV1D-39P04432 117 aa11.24□□□□□ -0.61
TRAF4-210ENST00000475329 THBS3P49746 956 aa11.24□□□□□ -0.61
TRAF4-210ENST00000475329 RAB32Q13637 225 aa11.24□□□□□ -0.61
TRAF4-210ENST00000475329 TMEM65Q6PI78 240 aa11.24□□□□□ -0.61
TRAF4-210ENST00000475329 CLEC2AQ6UVW9 174 aa11.24□□□□□ -0.61
TRAF4-210ENST00000475329 ODF3L1Q8IXM7 274 aa11.24□□□□□ -0.61
TRAF4-210ENST00000475329 C11orf42Q8N5U0 333 aa11.24□□□□□ -0.61
TRAF4-210ENST00000475329 LINC00311Q8N616 119 aa11.24□□□□□ -0.61
TRAF4-210ENST00000475329 OR9G1Q8NH87 305 aa11.24□□□□□ -0.61
TRAF4-210ENST00000475329 ZNF596Q8TC21 504 aa11.24□□□□□ -0.61
TRAF4-210ENST00000475329 FAM168AQ92567 244 aa11.24□□□□□ -0.61
TRAF4-210ENST00000475329 LSM10Q969L4 123 aaKnown RBP11.24□□□□□ -0.61
TRAF4-210ENST00000475329 ZFP57Q9NU63 452 aa11.24□□□□□ -0.61
TRAF4-210ENST00000475329 BOLA1Q9Y3E2 137 aa11.24□□□□□ -0.61
TRAF4-210ENST00000475329 SPTAN1Q13813 2472 aaKnown RBP11.23□□□□□ -0.61
TRAF4-210ENST00000475329 J3QR06 171 aa11.23□□□□□ -0.61
TRAF4-210ENST00000475329 L7N2F9 121 aa11.23□□□□□ -0.61
TRAF4-210ENST00000475329 M0R1W7 72 aa11.23□□□□□ -0.61
TRAF4-210ENST00000475329 RBFOX2O43251 390 aaKnown RBP eCLIP11.23□□□□□ -0.611e-6■□□□□ 9.7
TRAF4-210ENST00000475329 ENSAO43768 121 aaKnown RBP11.23□□□□□ -0.61
TRAF4-210ENST00000475329 RAMP3O60896 148 aa11.23□□□□□ -0.61
TRAF4-210ENST00000475329 SCGB1D2O95969 90 aa11.23□□□□□ -0.61
TRAF4-210ENST00000475329 SLC25A6P12236 298 aa11.23□□□□□ -0.61
TRAF4-210ENST00000475329 PAX1P15863 534 aa11.23□□□□□ -0.61
TRAF4-210ENST00000475329 C4BPBP20851 252 aa11.23□□□□□ -0.61
TRAF4-210ENST00000475329 SSTR2P30874 369 aa11.23□□□□□ -0.61
TRAF4-210ENST00000475329 ZNF816Q0VGE8 651 aaPredicted RBP11.23□□□□□ -0.61
TRAF4-210ENST00000475329 SMCO1Q147U7 214 aa11.23□□□□□ -0.61
TRAF4-210ENST00000475329 LGALSLQ3ZCW2 172 aaPredicted RBP11.23□□□□□ -0.61
TRAF4-210ENST00000475329 NCR3LG1Q68D85 454 aa11.23□□□□□ -0.61
TRAF4-210ENST00000475329 FAM71F2Q6NXP2 309 aa11.23□□□□□ -0.61
TRAF4-210ENST00000475329 PRSS54Q6PEW0 395 aa11.23□□□□□ -0.61
TRAF4-210ENST00000475329 ZNF833PQ6ZTB9 187 aa11.23□□□□□ -0.61
TRAF4-210ENST00000475329 ZNF546Q86UE3 836 aa11.23□□□□□ -0.61
TRAF4-210ENST00000475329 OR10X1Q8NGY0 326 aa11.23□□□□□ -0.61
TRAF4-210ENST00000475329 CLDND2Q8NHS1 167 aa11.23□□□□□ -0.61
TRAF4-210ENST00000475329 TNFRSF14Q92956 283 aa11.23□□□□□ -0.61
TRAF4-210ENST00000475329 RRNAD1Q96FB5 475 aaKnown RBP11.23□□□□□ -0.61
TRAF4-210ENST00000475329 ZNF251Q9BRH9 671 aa11.23□□□□□ -0.61
TRAF4-210ENST00000475329 AKAP6Q13023 2319 aa11.23□□□□□ -0.61
TRAF4-210ENST00000475329 A0A1B0GU03 582 aa11.22□□□□□ -0.61
TRAF4-210ENST00000475329 ARHGAP32A7KAX9 2087 aa11.22□□□□□ -0.61
TRAF4-210ENST00000475329 KIAA1324LA8MWY0 1029 aaPredicted RBP11.22□□□□□ -0.61
TRAF4-210ENST00000475329 A8MXK9 166 aa11.22□□□□□ -0.61
TRAF4-210ENST00000475329 TOR1AO14656 332 aa11.22□□□□□ -0.61
TRAF4-210ENST00000475329 FCGR3BO75015 233 aa11.22□□□□□ -0.61
TRAF4-210ENST00000475329 S1PR2O95136 353 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms