RNA–Protein interactions for RNA: ENST00000474825.1

ATG4A-207, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 3

Gene ATG4A, Length 502 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-207ENST00000474825 UTP20O75691 2785 aaKnown RBP5.42□□□□□ -1.54
ATG4A-207ENST00000474825 USF3Q68DE3 2245 aa5.42□□□□□ -1.54
ATG4A-207ENST00000474825 DSCAML1Q8TD84 2053 aa5.41□□□□□ -1.54
ATG4A-207ENST00000474825 MALRD1Q5VYJ5 2156 aa5.41□□□□□ -1.54
ATG4A-207ENST00000474825 IGHV3-43A0A0B4J1X8 118 aa5.41□□□□□ -1.54
ATG4A-207ENST00000474825 A0A1W2PPH5 198 aa5.41□□□□□ -1.54
ATG4A-207ENST00000474825 RNF212BA8MTL3 300 aa5.41□□□□□ -1.54
ATG4A-207ENST00000474825 A8MV72 311 aaPredicted RBP5.41□□□□□ -1.54
ATG4A-207ENST00000474825 C22orf46C9J442 243 aa5.41□□□□□ -1.54
ATG4A-207ENST00000474825 M0R1W7 72 aa5.41□□□□□ -1.54
ATG4A-207ENST00000474825 GOSR2O14653 212 aa5.41□□□□□ -1.54
ATG4A-207ENST00000474825 HSD17B6O14756 317 aa5.41□□□□□ -1.54
ATG4A-207ENST00000474825 SLC31A2O15432 143 aa5.41□□□□□ -1.54
ATG4A-207ENST00000474825 RBFOX2O43251 390 aaKnown RBP eCLIP5.41□□□□□ -1.54
ATG4A-207ENST00000474825 SNAPC5O75971 98 aa5.41□□□□□ -1.54
ATG4A-207ENST00000474825 IGLV1-47P01700 117 aa5.41□□□□□ -1.54
ATG4A-207ENST00000474825 IGHV1-8P0DP01 117 aa5.41□□□□□ -1.54
ATG4A-207ENST00000474825 IGHV3-43DP0DP04 118 aa5.41□□□□□ -1.54
ATG4A-207ENST00000474825 SLC25A4P12235 298 aa5.41□□□□□ -1.54
ATG4A-207ENST00000474825 SLC25A6P12236 298 aa5.41□□□□□ -1.54
ATG4A-207ENST00000474825 LYL1P12980 280 aa5.41□□□□□ -1.54
ATG4A-207ENST00000474825 RPA2P15927 270 aa5.41□□□□□ -1.54
ATG4A-207ENST00000474825 CCL3L1P16619 93 aa5.41□□□□□ -1.54
ATG4A-207ENST00000474825 OMGP23515 440 aa5.41□□□□□ -1.54
ATG4A-207ENST00000474825 S100GP29377 79 aa5.41□□□□□ -1.54
ATG4A-207ENST00000474825 DSCR9P59020 149 aa5.41□□□□□ -1.54
ATG4A-207ENST00000474825 RPL30P62888 115 aaKnown RBP5.41□□□□□ -1.54
ATG4A-207ENST00000474825 CYCSP99999 105 aaKnown RBP5.41□□□□□ -1.54
ATG4A-207ENST00000474825 SLC9A3R2Q15599 337 aa5.41□□□□□ -1.54
ATG4A-207ENST00000474825 SP6Q3SY56 376 aa5.41□□□□□ -1.54
ATG4A-207ENST00000474825 ARSJQ5FYB0 599 aaPredicted RBP5.41□□□□□ -1.54
ATG4A-207ENST00000474825 NMSQ5H8A3 153 aa5.41□□□□□ -1.54
ATG4A-207ENST00000474825 UTF1Q5T230 341 aa5.41□□□□□ -1.54
ATG4A-207ENST00000474825 FAM71F2Q6NXP2 309 aa5.41□□□□□ -1.54
ATG4A-207ENST00000474825 NOXA1Q86UR1 476 aa5.41□□□□□ -1.54
ATG4A-207ENST00000474825 SELENOHQ8IZQ5 122 aaKnown RBP5.41□□□□□ -1.54
ATG4A-207ENST00000474825 LRRC75A-AS1Q8N1F1 130 aa5.41□□□□□ -1.54
ATG4A-207ENST00000474825 ZNF525Q8N782 197 aa5.41□□□□□ -1.54
ATG4A-207ENST00000474825 CASTOR1Q8WTX7 329 aa5.41□□□□□ -1.54
ATG4A-207ENST00000474825 DDB2Q92466 427 aa5.41□□□□□ -1.54
ATG4A-207ENST00000474825 ST6GALNAC6Q969X2 333 aa5.41□□□□□ -1.54
ATG4A-207ENST00000474825 RAB39BQ96DA2 213 aa5.41□□□□□ -1.54
ATG4A-207ENST00000474825 MBD6Q96DN6 1003 aa5.41□□□□□ -1.54
ATG4A-207ENST00000474825 WDR89Q96FK6 387 aaPredicted RBP5.41□□□□□ -1.54
ATG4A-207ENST00000474825 HYLS1Q96M11 299 aa5.41□□□□□ -1.54
ATG4A-207ENST00000474825 HSD17B10Q99714 261 aaKnown RBP5.41□□□□□ -1.54
ATG4A-207ENST00000474825 ABHD14AQ9BUJ0 271 aa5.41□□□□□ -1.54
ATG4A-207ENST00000474825 NMES1Q9C002 83 aa5.41□□□□□ -1.54
ATG4A-207ENST00000474825 OR2D2Q9H210 308 aa5.41□□□□□ -1.54
ATG4A-207ENST00000474825 RANBP3Q9H6Z4 567 aaPredicted RBP5.41□□□□□ -1.54
ATG4A-207ENST00000474825 GNG12Q9UBI6 72 aa5.41□□□□□ -1.54
ATG4A-207ENST00000474825 PSG11Q9UQ72 335 aa5.41□□□□□ -1.54
ATG4A-207ENST00000474825 TMED3Q9Y3Q3 217 aa5.41□□□□□ -1.54
ATG4A-207ENST00000474825 LOC105371242A0A075B767 164 aa5.4□□□□□ -1.54
ATG4A-207ENST00000474825 TRAV14DV4A0A0A6YYC5 116 aa5.4□□□□□ -1.54
ATG4A-207ENST00000474825 PPIAL4CA0A0B4J2A2 164 aa5.4□□□□□ -1.54
ATG4A-207ENST00000474825 MEX3AA1L020 520 aaKnown RBP5.4□□□□□ -1.54
ATG4A-207ENST00000474825 HMSDA8MTL9 139 aa5.4□□□□□ -1.54
ATG4A-207ENST00000474825 J3QR06 171 aa5.4□□□□□ -1.54
ATG4A-207ENST00000474825 RAB29O14966 203 aa5.4□□□□□ -1.54
ATG4A-207ENST00000474825 PHF1O43189 567 aaPredicted RBP5.4□□□□□ -1.54
ATG4A-207ENST00000474825 PITX3O75364 302 aa5.4□□□□□ -1.54
ATG4A-207ENST00000474825 ADAP1O75689 374 aa5.4□□□□□ -1.54
ATG4A-207ENST00000474825 SIX6O95475 246 aa5.4□□□□□ -1.54
ATG4A-207ENST00000474825 IGKV1-39P01597 117 aa5.4□□□□□ -1.54
ATG4A-207ENST00000474825 IGKV1D-39P04432 117 aa5.4□□□□□ -1.54
ATG4A-207ENST00000474825 LIPFP07098 398 aa5.4□□□□□ -1.54
ATG4A-207ENST00000474825 P0C879 139 aa5.4□□□□□ -1.54
ATG4A-207ENST00000474825 PPIAL4GP0DN37 164 aa5.4□□□□□ -1.54
ATG4A-207ENST00000474825 VDAC1P21796 283 aa5.4□□□□□ -1.54
ATG4A-207ENST00000474825 DUTP33316 252 aaKnown RBP5.4□□□□□ -1.54
ATG4A-207ENST00000474825 GNB2P62879 340 aa5.4□□□□□ -1.54
ATG4A-207ENST00000474825 FGL1Q08830 312 aa5.4□□□□□ -1.54
ATG4A-207ENST00000474825 ZFP69Q49AA0 526 aa5.4□□□□□ -1.54
ATG4A-207ENST00000474825 Q5BKY6 102 aa5.4□□□□□ -1.54
ATG4A-207ENST00000474825 KIAA2026Q5HYC2 2103 aa5.4□□□□□ -1.54
ATG4A-207ENST00000474825 PRAMEF5Q5TYX0 476 aa5.4□□□□□ -1.54
ATG4A-207ENST00000474825 GGNBP1Q5YKI7 109 aa5.4□□□□□ -1.54
ATG4A-207ENST00000474825 LIN54Q6MZP7 749 aa5.4□□□□□ -1.54
ATG4A-207ENST00000474825 TMEM65Q6PI78 240 aa5.4□□□□□ -1.54
ATG4A-207ENST00000474825 ZNF833PQ6ZTB9 187 aa5.4□□□□□ -1.54
ATG4A-207ENST00000474825 LYZL2Q7Z4W2 148 aa5.4□□□□□ -1.54
ATG4A-207ENST00000474825 Q8N7P7 452 aa5.4□□□□□ -1.54
ATG4A-207ENST00000474825 BEND2Q8NDZ0 799 aa5.4□□□□□ -1.54
ATG4A-207ENST00000474825 OR11H4Q8NGC9 324 aa5.4□□□□□ -1.54
ATG4A-207ENST00000474825 OR2T35Q8NGX2 323 aa5.4□□□□□ -1.54
ATG4A-207ENST00000474825 OR9G1Q8NH87 305 aa5.4□□□□□ -1.54
ATG4A-207ENST00000474825 CLDND2Q8NHS1 167 aa5.4□□□□□ -1.54
ATG4A-207ENST00000474825 CD300LFQ8TDQ1 290 aa5.4□□□□□ -1.54
ATG4A-207ENST00000474825 H1FXQ92522 213 aaKnown RBP5.4□□□□□ -1.54
ATG4A-207ENST00000474825 RBPMSQ93062 196 aaKnown RBP5.4□□□□□ -1.54
ATG4A-207ENST00000474825 LSM10Q969L4 123 aaKnown RBP5.4□□□□□ -1.54
ATG4A-207ENST00000474825 ABHD14BQ96IU4 210 aa5.4□□□□□ -1.54
ATG4A-207ENST00000474825 OR10C1Q96KK4 312 aa5.4□□□□□ -1.54
ATG4A-207ENST00000474825 C2orf50Q96LR7 162 aa5.4□□□□□ -1.54
ATG4A-207ENST00000474825 SSBP3Q9BWW4 388 aaPredicted RBP5.4□□□□□ -1.54
ATG4A-207ENST00000474825 BPESC1Q9GZL8 116 aa5.4□□□□□ -1.54
ATG4A-207ENST00000474825 TMEM133Q9H2Q1 129 aa5.4□□□□□ -1.54
ATG4A-207ENST00000474825 LIN7CQ9NUP9 197 aaKnown RBP5.4□□□□□ -1.54
ATG4A-207ENST00000474825 BEX4Q9NWD9 120 aaPredicted RBP5.4□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms