RNA–Protein interactions for RNA: ENST00000474572.6

USP39-214, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 293 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-214ENST00000474572 BOLLQ8N9W6 283 aaKnown RBP8.13□□□□□ -1.11
USP39-214ENST00000474572 KDF1Q8NAX2 398 aaPredicted RBP8.13□□□□□ -1.11
USP39-214ENST00000474572 HSD17B11Q8NBQ5 300 aa8.13□□□□□ -1.11
USP39-214ENST00000474572 ZNF436-AS1Q8NC38 126 aaPredicted RBP8.13□□□□□ -1.11
USP39-214ENST00000474572 RFESDQ8TAC1 157 aa8.13□□□□□ -1.11
USP39-214ENST00000474572 CD300LFQ8TDQ1 290 aa8.13□□□□□ -1.11
USP39-214ENST00000474572 TCTEX1D2Q8WW35 142 aa8.13□□□□□ -1.11
USP39-214ENST00000474572 LRRC46Q96FV0 321 aa8.13□□□□□ -1.11
USP39-214ENST00000474572 KCNJ16Q9NPI9 418 aa8.13□□□□□ -1.11
USP39-214ENST00000474572 GFOD1Q9NXC2 390 aa8.13□□□□□ -1.11
USP39-214ENST00000474572 PSENENQ9NZ42 101 aa8.13□□□□□ -1.11
USP39-214ENST00000474572 PSG11Q9UQ72 335 aa8.13□□□□□ -1.11
USP39-214ENST00000474572 LOC400499M0QZD8 3231 aa8.12□□□□□ -1.11
USP39-214ENST00000474572 CELSR3Q9NYQ7 3312 aa8.12□□□□□ -1.11
USP39-214ENST00000474572 KBTBD11-OT1A0A1B0GTJ5 212 aa8.12□□□□□ -1.11
USP39-214ENST00000474572 ZNF729A6NN14 1252 aaPredicted RBP8.12□□□□□ -1.11
USP39-214ENST00000474572 PMS2P5A8MQ11 134 aa8.12□□□□□ -1.11
USP39-214ENST00000474572 SHISA9B4DS77 424 aa8.12□□□□□ -1.11
USP39-214ENST00000474572 DNASE2O00115 360 aaPredicted RBP8.12□□□□□ -1.11
USP39-214ENST00000474572 TNFRSF13BO14836 293 aaPredicted RBP8.12□□□□□ -1.11
USP39-214ENST00000474572 OR4A8P0C604 315 aa8.12□□□□□ -1.11
USP39-214ENST00000474572 SELLP14151 372 aa8.12□□□□□ -1.11
USP39-214ENST00000474572 OMGP23515 440 aa8.12□□□□□ -1.11
USP39-214ENST00000474572 G6PCP35575 357 aa8.12□□□□□ -1.11
USP39-214ENST00000474572 CA7P43166 264 aa8.12□□□□□ -1.11
USP39-214ENST00000474572 GPR12P47775 334 aa8.12□□□□□ -1.11
USP39-214ENST00000474572 CAMLGP49069 296 aa8.12□□□□□ -1.11
USP39-214ENST00000474572 RAB7AP51149 207 aa8.12□□□□□ -1.11
USP39-214ENST00000474572 UBE2KP61086 200 aa8.12□□□□□ -1.11
USP39-214ENST00000474572 ARL16Q0P5N6 197 aa8.12□□□□□ -1.11
USP39-214ENST00000474572 ZNF816Q0VGE8 651 aaPredicted RBP8.12□□□□□ -1.11
USP39-214ENST00000474572 ZNF273Q14593 569 aa8.12□□□□□ -1.11
USP39-214ENST00000474572 DPPA3Q6W0C5 159 aa8.12□□□□□ -1.11
USP39-214ENST00000474572 TMEM182Q6ZP80 229 aaPredicted RBP8.12□□□□□ -1.11
USP39-214ENST00000474572 ZNF439Q8NDP4 499 aa8.12□□□□□ -1.11
USP39-214ENST00000474572 ST6GALNAC3Q8NDV1 305 aa8.12□□□□□ -1.11
USP39-214ENST00000474572 LFNGQ8NES3 379 aa8.12□□□□□ -1.11
USP39-214ENST00000474572 DDB2Q92466 427 aa8.12□□□□□ -1.11
USP39-214ENST00000474572 WFIKKN1Q96NZ8 548 aa8.12□□□□□ -1.11
USP39-214ENST00000474572 PSMG3Q9BT73 122 aaPredicted RBP8.12□□□□□ -1.11
USP39-214ENST00000474572 NKX6-2Q9C056 277 aaPredicted RBP8.12□□□□□ -1.11
USP39-214ENST00000474572 RBKSQ9H477 322 aa8.12□□□□□ -1.11
USP39-214ENST00000474572 ESRP2Q9H6T0 727 aaKnown RBP8.12□□□□□ -1.11
USP39-214ENST00000474572 NGBQ9NPG2 151 aa8.12□□□□□ -1.11
USP39-214ENST00000474572 CLN8Q9UBY8 286 aa8.12□□□□□ -1.11
USP39-214ENST00000474572 SH3BGRL2Q9UJC5 107 aa8.12□□□□□ -1.11
USP39-214ENST00000474572 ZFHX2Q9C0A1 2572 aaPredicted RBP8.12□□□□□ -1.11
USP39-214ENST00000474572 SPENQ96T58 3664 aaKnown RBP8.11□□□□□ -1.11
USP39-214ENST00000474572 SVILO95425 2214 aa8.11□□□□□ -1.11
USP39-214ENST00000474572 TSPAN15O95858 294 aa8.11□□□□□ -1.11
USP39-214ENST00000474572 HPRT1P00492 218 aa8.11□□□□□ -1.11
USP39-214ENST00000474572 IAPPP10997 89 aa8.11□□□□□ -1.11
USP39-214ENST00000474572 IRF2P14316 349 aa8.11□□□□□ -1.11
USP39-214ENST00000474572 KIR2DS2P43631 304 aa8.11□□□□□ -1.11
USP39-214ENST00000474572 ZNF134P52741 427 aa8.11□□□□□ -1.11
USP39-214ENST00000474572 EDDM3BP56851 147 aa8.11□□□□□ -1.11
USP39-214ENST00000474572 AKR1C1Q04828 323 aa8.11□□□□□ -1.11
USP39-214ENST00000474572 TMEM267Q0VDI3 215 aaPredicted RBP8.11□□□□□ -1.11
USP39-214ENST00000474572 KLRB1Q12918 225 aa8.11□□□□□ -1.11
USP39-214ENST00000474572 BTN1A1Q13410 526 aa8.11□□□□□ -1.11
USP39-214ENST00000474572 EFNB3Q15768 340 aa8.11□□□□□ -1.11
USP39-214ENST00000474572 GUCA2BQ16661 112 aa8.11□□□□□ -1.11
USP39-214ENST00000474572 PDLIM3Q53GG5 364 aaPredicted RBP8.11□□□□□ -1.11
USP39-214ENST00000474572 NCR3LG1Q68D85 454 aa8.11□□□□□ -1.11
USP39-214ENST00000474572 SPSB3Q6PJ21 355 aa8.11□□□□□ -1.11
USP39-214ENST00000474572 DUX4L9Q6RFH8 374 aaPredicted RBP8.11□□□□□ -1.11
USP39-214ENST00000474572 BTNL3Q6UXE8 466 aa8.11□□□□□ -1.11
USP39-214ENST00000474572 PUSL1Q8N0Z8 303 aaKnown RBP8.11□□□□□ -1.11
USP39-214ENST00000474572 SVBPQ8N300 66 aa8.11□□□□□ -1.11
USP39-214ENST00000474572 OR10A7Q8NGE5 316 aa8.11□□□□□ -1.11
USP39-214ENST00000474572 OR2G3Q8NGZ4 309 aa8.11□□□□□ -1.11
USP39-214ENST00000474572 NARS2Q96I59 477 aaKnown RBP8.11□□□□□ -1.11
USP39-214ENST00000474572 ZNF251Q9BRH9 671 aa8.11□□□□□ -1.11
USP39-214ENST00000474572 TMEM231Q9H6L2 316 aa8.11□□□□□ -1.11
USP39-214ENST00000474572 TREM1Q9NP99 234 aa8.11□□□□□ -1.11
USP39-214ENST00000474572 CTNNBIP1Q9NSA3 81 aaPredicted RBP8.11□□□□□ -1.11
USP39-214ENST00000474572 IDI2-AS1Q9NZ38 188 aa8.11□□□□□ -1.11
USP39-214ENST00000474572 GNG12Q9UBI6 72 aa8.11□□□□□ -1.11
USP39-214ENST00000474572 RAXQ9Y2V3 346 aa8.11□□□□□ -1.11
USP39-214ENST00000474572 FAM96BQ9Y3D0 163 aa8.11□□□□□ -1.11
USP39-214ENST00000474572 ZGRF1Q86YA3 2104 aa8.11□□□□□ -1.11
USP39-214ENST00000474572 URB1O60287 2271 aaKnown RBP8.1□□□□□ -1.11
USP39-214ENST00000474572 RIF1Q5UIP0 2472 aaKnown RBP8.1□□□□□ -1.11
USP39-214ENST00000474572 TRGV10A0A0A0MS01 117 aa8.1□□□□□ -1.11
USP39-214ENST00000474572 TRAV38-1A0A0B4J264 116 aa8.1□□□□□ -1.11
USP39-214ENST00000474572 BTBD17A6NE02 478 aa8.1□□□□□ -1.11
USP39-214ENST00000474572 NKX6-3A6NJ46 265 aa8.1□□□□□ -1.11
USP39-214ENST00000474572 DEFB108AA8MXU0 73 aa8.1□□□□□ -1.11
USP39-214ENST00000474572 C9JQL5 133 aa8.1□□□□□ -1.11
USP39-214ENST00000474572 E7EQL1 145 aa8.1□□□□□ -1.11
USP39-214ENST00000474572 F8W036 122 aa8.1□□□□□ -1.11
USP39-214ENST00000474572 H3BP45 60 aa8.1□□□□□ -1.11
USP39-214ENST00000474572 TMEM178BH3BS89 294 aa8.1□□□□□ -1.11
USP39-214ENST00000474572 SLC31A2O15432 143 aa8.1□□□□□ -1.11
USP39-214ENST00000474572 C1QL1O75973 258 aa8.1□□□□□ -1.11
USP39-214ENST00000474572 SCAF4O95104 1147 aaKnown RBP8.1□□□□□ -1.11
USP39-214ENST00000474572 LY86O95711 162 aa8.1□□□□□ -1.11
USP39-214ENST00000474572 KRASP01116 189 aa8.1□□□□□ -1.11
USP39-214ENST00000474572 GYPAP02724 150 aa8.1□□□□□ -1.11
USP39-214ENST00000474572 METTL15P1P0C7V9 234 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms