RNA–Protein interactions for RNA: ENST00000474564.1

COL12A1-206, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 3

Gene COL12A1, Length 499 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-206ENST00000474564 BVESQ8NE79 360 aa8.46□□□□□ -1.06
COL12A1-206ENST00000474564 CT45A3Q8NHU0 189 aa8.46□□□□□ -1.06
COL12A1-206ENST00000474564 NANPQ8TBE9 248 aa8.46□□□□□ -1.06
COL12A1-206ENST00000474564 RTN4IP1Q8WWV3 396 aaPredicted RBP8.46□□□□□ -1.06
COL12A1-206ENST00000474564 LEAP2Q969E1 77 aa8.46□□□□□ -1.06
COL12A1-206ENST00000474564 ABHD14BQ96IU4 210 aa8.46□□□□□ -1.06
COL12A1-206ENST00000474564 C18orf12Q96KH6 178 aa8.46□□□□□ -1.06
COL12A1-206ENST00000474564 NEURL2Q9BR09 285 aa8.46□□□□□ -1.06
COL12A1-206ENST00000474564 CHIAQ9BZP6 476 aa8.46□□□□□ -1.06
COL12A1-206ENST00000474564 LIN7CQ9NUP9 197 aaKnown RBP8.46□□□□□ -1.06
COL12A1-206ENST00000474564 COMMD9Q9P000 198 aa8.46□□□□□ -1.06
COL12A1-206ENST00000474564 DPM3Q9P2X0 92 aa8.46□□□□□ -1.06
COL12A1-206ENST00000474564 TBL2Q9Y4P3 447 aaKnown RBP8.46□□□□□ -1.06
COL12A1-206ENST00000474564 A0A096LNT2 108 aa8.45□□□□□ -1.06
COL12A1-206ENST00000474564 A0A1W2PPE3 182 aa8.45□□□□□ -1.06
COL12A1-206ENST00000474564 C9orf170A2RU37 121 aa8.45□□□□□ -1.06
COL12A1-206ENST00000474564 C5orf51A6NDU8 294 aa8.45□□□□□ -1.06
COL12A1-206ENST00000474564 BUB1B-PAK6H3BSN5 160 aa8.45□□□□□ -1.06
COL12A1-206ENST00000474564 M0R1X1 148 aa8.45□□□□□ -1.06
COL12A1-206ENST00000474564 MPPED1O15442 326 aa8.45□□□□□ -1.06
COL12A1-206ENST00000474564 SFT2D2O95562 160 aa8.45□□□□□ -1.06
COL12A1-206ENST00000474564 IFNA2P01563 188 aa8.45□□□□□ -1.06
COL12A1-206ENST00000474564 SERPINE2P07093 398 aa8.45□□□□□ -1.06
COL12A1-206ENST00000474564 BRS3P32247 399 aa8.45□□□□□ -1.06
COL12A1-206ENST00000474564 MC5RP33032 325 aa8.45□□□□□ -1.06
COL12A1-206ENST00000474564 RND3P61587 244 aa8.45□□□□□ -1.06
COL12A1-206ENST00000474564 DHRS2Q13268 280 aa8.45□□□□□ -1.06
COL12A1-206ENST00000474564 RTL8BQ17RB0 113 aa8.45□□□□□ -1.06
COL12A1-206ENST00000474564 C5orf24Q7Z6I8 188 aa8.45□□□□□ -1.06
COL12A1-206ENST00000474564 KRTAP1-3Q8IUG1 177 aa8.45□□□□□ -1.06
COL12A1-206ENST00000474564 C11orf42Q8N5U0 333 aa8.45□□□□□ -1.06
COL12A1-206ENST00000474564 DRAM1Q8N682 238 aa8.45□□□□□ -1.06
COL12A1-206ENST00000474564 ZNF439Q8NDP4 499 aa8.45□□□□□ -1.06
COL12A1-206ENST00000474564 RNASE11Q8TAA1 199 aaKnown RBP8.45□□□□□ -1.06
COL12A1-206ENST00000474564 TCTEX1D2Q8WW35 142 aa8.45□□□□□ -1.06
COL12A1-206ENST00000474564 MALSU1Q96EH3 234 aa8.45□□□□□ -1.06
COL12A1-206ENST00000474564 RANGRFQ9HD47 186 aaPredicted RBP8.45□□□□□ -1.06
COL12A1-206ENST00000474564 SLC2A9Q9NRM0 540 aa8.45□□□□□ -1.06
COL12A1-206ENST00000474564 COL12A1Q99715 3063 aa8.44□□□□□ -1.06
COL12A1-206ENST00000474564 TENM4Q6N022 2769 aa8.44□□□□□ -1.06
COL12A1-206ENST00000474564 ARID1AO14497 2285 aa8.44□□□□□ -1.06
COL12A1-206ENST00000474564 IGKV1D-13A0A0B4J2D9 117 aa8.44□□□□□ -1.06
COL12A1-206ENST00000474564 IGHV1-69DA0A0B4J2H0 117 aa8.44□□□□□ -1.06
COL12A1-206ENST00000474564 C3orf85A0A1B0GTC6 90 aa8.44□□□□□ -1.06
COL12A1-206ENST00000474564 NPFFO15130 113 aa8.44□□□□□ -1.06
COL12A1-206ENST00000474564 PGLYRP1O75594 196 aaPredicted RBP8.44□□□□□ -1.06
COL12A1-206ENST00000474564 IFNA21P01568 189 aa8.44□□□□□ -1.06
COL12A1-206ENST00000474564 IGHV1-69P01742 117 aa8.44□□□□□ -1.06
COL12A1-206ENST00000474564 IGKV1-13P0DP09 117 aa8.44□□□□□ -1.06
COL12A1-206ENST00000474564 FOSL1P15407 271 aa8.44□□□□□ -1.06
COL12A1-206ENST00000474564 RAB13P51153 203 aa8.44□□□□□ -1.06
COL12A1-206ENST00000474564 ZNF134P52741 427 aa8.44□□□□□ -1.06
COL12A1-206ENST00000474564 GSG1LQ6UXU4 331 aa8.44□□□□□ -1.06
COL12A1-206ENST00000474564 ZNF818PQ6ZRF7 136 aa8.44□□□□□ -1.06
COL12A1-206ENST00000474564 MOB3BQ86TA1 216 aa8.44□□□□□ -1.06
COL12A1-206ENST00000474564 TBC1D26Q86UD7 250 aa8.44□□□□□ -1.06
COL12A1-206ENST00000474564 OR8H3Q8N146 312 aa8.44□□□□□ -1.06
COL12A1-206ENST00000474564 TBX15Q96SF7 602 aa8.44□□□□□ -1.06
COL12A1-206ENST00000474564 AGMATQ9BSE5 352 aa8.44□□□□□ -1.06
COL12A1-206ENST00000474564 RTBDNQ9BSG5 229 aaPredicted RBP8.44□□□□□ -1.06
COL12A1-206ENST00000474564 ZNF436Q9C0F3 470 aaPredicted RBP8.44□□□□□ -1.06
COL12A1-206ENST00000474564 MS4A7Q9GZW8 240 aaPredicted RBP8.44□□□□□ -1.06
COL12A1-206ENST00000474564 C5orf66Q9H5L9 145 aa8.44□□□□□ -1.06
COL12A1-206ENST00000474564 NAA60Q9H7X0 242 aa8.44□□□□□ -1.06
COL12A1-206ENST00000474564 SDHAF2Q9NX18 166 aa8.44□□□□□ -1.06
COL12A1-206ENST00000474564 DOCK11Q5JSL3 2073 aa8.43□□□□□ -1.06
COL12A1-206ENST00000474564 SAA2-SAA4A0A096LPE2 208 aa8.43□□□□□ -1.06
COL12A1-206ENST00000474564 C13orf42A0A1B0GVH6 325 aa8.43□□□□□ -1.06
COL12A1-206ENST00000474564 CRYM-AS1A6NIL9 109 aa8.43□□□□□ -1.06
COL12A1-206ENST00000474564 H7C2Y5 167 aa8.43□□□□□ -1.06
COL12A1-206ENST00000474564 TNFSF12O43508 249 aa8.43□□□□□ -1.06
COL12A1-206ENST00000474564 CD5LO43866 347 aa8.43□□□□□ -1.06
COL12A1-206ENST00000474564 DUS4LO95620 317 aaKnown RBP8.43□□□□□ -1.06
COL12A1-206ENST00000474564 IGLV1-47P01700 117 aa8.43□□□□□ -1.06
COL12A1-206ENST00000474564 SAA2P0DJI9 122 aaPredicted RBP8.43□□□□□ -1.06
COL12A1-206ENST00000474564 SULT1A3P0DMM9 295 aa8.43□□□□□ -1.06
COL12A1-206ENST00000474564 SULT1A4P0DMN0 295 aa8.43□□□□□ -1.06
COL12A1-206ENST00000474564 CD99P14209 185 aa8.43□□□□□ -1.06
COL12A1-206ENST00000474564 MMP9P14780 707 aa8.43□□□□□ -1.06
COL12A1-206ENST00000474564 RPA2P15927 270 aa8.43□□□□□ -1.06
COL12A1-206ENST00000474564 HOXB4P17483 251 aaPredicted RBP8.43□□□□□ -1.06
COL12A1-206ENST00000474564 F2RP25116 425 aa8.43□□□□□ -1.06
COL12A1-206ENST00000474564 SRP14P37108 136 aaKnown RBP8.43□□□□□ -1.06
COL12A1-206ENST00000474564 ERVK-16P61578 105 aa8.43□□□□□ -1.06
COL12A1-206ENST00000474564 DHRS7BQ6IAN0 325 aaPredicted RBP8.43□□□□□ -1.06
COL12A1-206ENST00000474564 SPNS3Q6ZMD2 512 aa8.43□□□□□ -1.06
COL12A1-206ENST00000474564 ZNF695Q8IW36 515 aa8.43□□□□□ -1.06
COL12A1-206ENST00000474564 PDZD9Q8IXQ8 264 aa8.43□□□□□ -1.06
COL12A1-206ENST00000474564 LGI3Q8N145 548 aa8.43□□□□□ -1.06
COL12A1-206ENST00000474564 OR51H1Q8NH63 302 aa8.43□□□□□ -1.06
COL12A1-206ENST00000474564 IFI27L2Q9H2X8 130 aa8.43□□□□□ -1.06
COL12A1-206ENST00000474564 YAE1D1Q9NRH1 226 aa8.43□□□□□ -1.06
COL12A1-206ENST00000474564 FAM212BQ9NTI7 297 aaPredicted RBP8.43□□□□□ -1.06
COL12A1-206ENST00000474564 TRAV40A0A0B4J280 105 aa8.42□□□□□ -1.06
COL12A1-206ENST00000474564 CENPVL3A0A0U1RRI6 287 aa8.42□□□□□ -1.06
COL12A1-206ENST00000474564 A0A1W2PRD5 423 aa8.42□□□□□ -1.06
COL12A1-206ENST00000474564 A0A1W2PRF3 423 aa8.42□□□□□ -1.06
COL12A1-206ENST00000474564 A0A1W2PRM7 423 aa8.42□□□□□ -1.06
COL12A1-206ENST00000474564 H0Y980 276 aa8.42□□□□□ -1.06
COL12A1-206ENST00000474564 RNASEK-C17orf49H0YIS7 233 aa8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms