RNA–Protein interactions for RNA: ENST00000474421.1

PDLIM4-206, Transcript of PDZ and LIM domain 4, humanhuman

TSL 3

Gene PDLIM4, Length 1,084 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-206ENST00000474421 PECRQ9BY49 303 aa15.84■□□□□ 0.13
PDLIM4-206ENST00000474421 PARP12Q9H0J9 701 aaKnown RBP15.84■□□□□ 0.13
PDLIM4-206ENST00000474421 FBXL15Q9H469 300 aa15.84■□□□□ 0.13
PDLIM4-206ENST00000474421 GNB4Q9HAV0 340 aa15.84■□□□□ 0.13
PDLIM4-206ENST00000474421 OR1A1Q9P1Q5 309 aa15.84■□□□□ 0.13
PDLIM4-206ENST00000474421 ZNF221Q9UK13 617 aa15.84■□□□□ 0.13
PDLIM4-206ENST00000474421 RNF150Q9ULK6 438 aa15.84■□□□□ 0.13
PDLIM4-206ENST00000474421 FOXA2Q9Y261 457 aaPredicted RBP15.84■□□□□ 0.13
PDLIM4-206ENST00000474421 DENRO43583 198 aaKnown RBP15.83■□□□□ 0.12
PDLIM4-206ENST00000474421 ECI1P42126 302 aa15.83■□□□□ 0.12
PDLIM4-206ENST00000474421 HSPA13P48723 471 aa15.83■□□□□ 0.12
PDLIM4-206ENST00000474421 TMEM50BP56557 158 aa15.83■□□□□ 0.12
PDLIM4-206ENST00000474421 CX3CL1P78423 397 aa15.83■□□□□ 0.12
PDLIM4-206ENST00000474421 MRPS15P82914 257 aaKnown RBP15.83■□□□□ 0.12
PDLIM4-206ENST00000474421 FABP5Q01469 135 aa15.83■□□□□ 0.12
PDLIM4-206ENST00000474421 ECSCRQ19T08 205 aa15.83■□□□□ 0.12
PDLIM4-206ENST00000474421 C2orf76Q3KRA6 126 aa15.83■□□□□ 0.12
PDLIM4-206ENST00000474421 ZNF260Q3ZCT1 412 aa15.83■□□□□ 0.12
PDLIM4-206ENST00000474421 PYHIN1Q6K0P9 492 aa15.83■□□□□ 0.12
PDLIM4-206ENST00000474421 GLDNQ6ZMI3 551 aaPredicted RBP15.83■□□□□ 0.12
PDLIM4-206ENST00000474421 ABHD5Q8WTS1 349 aa15.83■□□□□ 0.12
PDLIM4-206ENST00000474421 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP15.83■□□□□ 0.12
PDLIM4-206ENST00000474421 SCOCQ9UIL1 159 aa15.83■□□□□ 0.12
PDLIM4-206ENST00000474421 RAB22AQ9UL26 194 aa15.83■□□□□ 0.12
PDLIM4-206ENST00000474421 BLOC1S6Q9UL45 172 aa15.83■□□□□ 0.12
PDLIM4-206ENST00000474421 TRDCB7Z8K6 153 aa15.82■□□□□ 0.12
PDLIM4-206ENST00000474421 PDCD5O14737 125 aa15.82■□□□□ 0.12
PDLIM4-206ENST00000474421 SCTP09683 121 aa15.82■□□□□ 0.12
PDLIM4-206ENST00000474421 NHLRC4P0CG21 123 aaPredicted RBP15.82■□□□□ 0.12
PDLIM4-206ENST00000474421 SERPINB10P48595 397 aa15.82■□□□□ 0.12
PDLIM4-206ENST00000474421 CLDN12P56749 244 aa15.82■□□□□ 0.12
PDLIM4-206ENST00000474421 C19orf54Q5BKX5 351 aa15.82■□□□□ 0.12
PDLIM4-206ENST00000474421 TSNAXQ99598 290 aaKnown RBP15.82■□□□□ 0.12
PDLIM4-206ENST00000474421 A0A1W2PN81 502 aa15.81■□□□□ 0.12
PDLIM4-206ENST00000474421 SPDEFO95238 335 aa15.81■□□□□ 0.12
PDLIM4-206ENST00000474421 APOA2P02652 100 aa15.81■□□□□ 0.12
PDLIM4-206ENST00000474421 CD40LGP29965 261 aa15.81■□□□□ 0.12
PDLIM4-206ENST00000474421 CHRNA7P36544 502 aa15.81■□□□□ 0.12
PDLIM4-206ENST00000474421 MAP2K4P45985 399 aa15.81■□□□□ 0.12
PDLIM4-206ENST00000474421 GNB1P62873 340 aa15.81■□□□□ 0.12
PDLIM4-206ENST00000474421 NDPQ00604 133 aa15.81■□□□□ 0.12
PDLIM4-206ENST00000474421 TBCEQ15813 527 aaPredicted RBP15.81■□□□□ 0.12
PDLIM4-206ENST00000474421 CD200R1LQ6Q8B3 271 aa15.81■□□□□ 0.12
PDLIM4-206ENST00000474421 ZNF367Q7RTV3 350 aa15.81■□□□□ 0.12
PDLIM4-206ENST00000474421 ZNF436-AS1Q8NC38 126 aaPredicted RBP15.81■□□□□ 0.12
PDLIM4-206ENST00000474421 SORL1Q92673 2214 aa15.81■□□□□ 0.12
PDLIM4-206ENST00000474421 OR5B12Q96R08 314 aa15.81■□□□□ 0.12
PDLIM4-206ENST00000474421 NUBP2Q9Y5Y2 271 aa15.81■□□□□ 0.12
PDLIM4-206ENST00000474421 LDLRAD4O15165 306 aa15.8■□□□□ 0.12
PDLIM4-206ENST00000474421 TFAP2AP05549 437 aa15.8■□□□□ 0.12
PDLIM4-206ENST00000474421 CD3GP09693 182 aa15.8■□□□□ 0.12
PDLIM4-206ENST00000474421 AKIRIN2Q53H80 203 aa15.8■□□□□ 0.12
PDLIM4-206ENST00000474421 PLAC9Q5JTB6 97 aa15.8■□□□□ 0.12
PDLIM4-206ENST00000474421 ZNF562Q6V9R5 426 aa15.8■□□□□ 0.12
PDLIM4-206ENST00000474421 PPP1R27Q86WC6 154 aa15.8■□□□□ 0.12
PDLIM4-206ENST00000474421 PDPNQ86YL7 162 aa15.8■□□□□ 0.12
PDLIM4-206ENST00000474421 OR4A4PQ8NGN8 299 aa15.8■□□□□ 0.12
PDLIM4-206ENST00000474421 PRR25Q96S07 402 aa15.8■□□□□ 0.12
PDLIM4-206ENST00000474421 RDH8Q9NYR8 311 aa15.8■□□□□ 0.12
PDLIM4-206ENST00000474421 METTL1Q9UBP6 276 aaKnown RBP15.8■□□□□ 0.12
PDLIM4-206ENST00000474421 ZNF256Q9Y2P7 627 aaPredicted RBP15.8■□□□□ 0.12
PDLIM4-206ENST00000474421 FBXO7Q9Y3I1 522 aa15.8■□□□□ 0.12
PDLIM4-206ENST00000474421 LSM4Q9Y4Z0 139 aaKnown RBP15.8■□□□□ 0.12
PDLIM4-206ENST00000474421 A3GALT2U3KPV4 340 aa15.8■□□□□ 0.12
PDLIM4-206ENST00000474421 TRAV1-2A0A0B4J238 106 aa15.79■□□□□ 0.12
PDLIM4-206ENST00000474421 TMEM272A0A1B0GTI8 110 aa15.79■□□□□ 0.12
PDLIM4-206ENST00000474421 FCN1O00602 326 aa15.79■□□□□ 0.12
PDLIM4-206ENST00000474421 RPS16P62249 146 aaKnown RBP15.79■□□□□ 0.12
PDLIM4-206ENST00000474421 PSG5Q15238 335 aa15.79■□□□□ 0.12
PDLIM4-206ENST00000474421 ACTBL2Q562R1 376 aa15.79■□□□□ 0.12
PDLIM4-206ENST00000474421 HES5Q5TA89 166 aa15.79■□□□□ 0.12
PDLIM4-206ENST00000474421 ASPHD1Q5U4P2 390 aa15.79■□□□□ 0.12
PDLIM4-206ENST00000474421 ZNF429Q86V71 674 aa15.79■□□□□ 0.12
PDLIM4-206ENST00000474421 DRAXINQ8NBI3 349 aaPredicted RBP15.79■□□□□ 0.12
PDLIM4-206ENST00000474421 RAB3CQ96E17 227 aa15.79■□□□□ 0.12
PDLIM4-206ENST00000474421 WWC2-AS2Q96NR7 200 aa15.79■□□□□ 0.12
PDLIM4-206ENST00000474421 IGKV1-6A0A0C4DH72 117 aa15.78■□□□□ 0.12
PDLIM4-206ENST00000474421 OVOL1O14753 267 aa15.78■□□□□ 0.12
PDLIM4-206ENST00000474421 FABP7O15540 132 aa15.78■□□□□ 0.12
PDLIM4-206ENST00000474421 SOX15O60248 233 aa15.78■□□□□ 0.12
PDLIM4-206ENST00000474421 DIRAS3O95661 229 aa15.78■□□□□ 0.12
PDLIM4-206ENST00000474421 LGALS1P09382 135 aaKnown RBP15.78■□□□□ 0.12
PDLIM4-206ENST00000474421 GADD45AP24522 165 aa15.78■□□□□ 0.12
PDLIM4-206ENST00000474421 MYL9P24844 172 aa15.78■□□□□ 0.12
PDLIM4-206ENST00000474421 UNQ5815/PRO19632Q6UWF5 114 aa15.78■□□□□ 0.12
PDLIM4-206ENST00000474421 IZUMO2Q6UXV1 221 aa15.78■□□□□ 0.12
PDLIM4-206ENST00000474421 ZNF383Q8NA42 475 aa15.78■□□□□ 0.12
PDLIM4-206ENST00000474421 FLYWCH2Q96CP2 140 aaKnown RBP15.78■□□□□ 0.12
PDLIM4-206ENST00000474421 CNBD2Q96M20 576 aa15.78■□□□□ 0.12
PDLIM4-206ENST00000474421 CENPOQ9BU64 300 aa15.78■□□□□ 0.12
PDLIM4-206ENST00000474421 TOLLIPQ9H0E2 274 aa15.78■□□□□ 0.12
PDLIM4-206ENST00000474421 LINC01619G3V211 115 aa15.77■□□□□ 0.12
PDLIM4-206ENST00000474421 PROP1O75360 226 aa15.77■□□□□ 0.12
PDLIM4-206ENST00000474421 IGKV1-16P04430 117 aa15.77■□□□□ 0.12
PDLIM4-206ENST00000474421 EGR2P11161 476 aaPredicted RBP15.77■□□□□ 0.12
PDLIM4-206ENST00000474421 OR10J5Q8NHC4 309 aa15.77■□□□□ 0.12
PDLIM4-206ENST00000474421 DCUN1D4Q92564 292 aa15.77■□□□□ 0.12
PDLIM4-206ENST00000474421 CLCC1Q96S66 551 aa15.77■□□□□ 0.12
PDLIM4-206ENST00000474421 SLA2Q9H6Q3 261 aa15.77■□□□□ 0.12
PDLIM4-206ENST00000474421 GAB2Q9UQC2 676 aa15.77■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms