RNA–Protein interactions for RNA: ENST00000474215.5

CKS1B-206, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 3

Gene CKS1B, Length 739 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-206ENST00000474215 ELANEP08246 267 aa8.77□□□□□ -1.01
CKS1B-206ENST00000474215 GSTP1P09211 210 aaKnown RBP8.77□□□□□ -1.01
CKS1B-206ENST00000474215 GSTT2P0CG29 244 aa8.77□□□□□ -1.01
CKS1B-206ENST00000474215 GSTT2BP0CG30 244 aa8.77□□□□□ -1.01
CKS1B-206ENST00000474215 OR5H8P0DN80 308 aa8.77□□□□□ -1.01
CKS1B-206ENST00000474215 SDC2P34741 201 aa8.77□□□□□ -1.01
CKS1B-206ENST00000474215 TALDO1P37837 337 aa8.77□□□□□ -1.01
CKS1B-206ENST00000474215 MYCNOSP40205 109 aa8.77□□□□□ -1.01
CKS1B-206ENST00000474215 CDX1P47902 265 aaPredicted RBP8.77□□□□□ -1.01
CKS1B-206ENST00000474215 THBS3P49746 956 aa8.77□□□□□ -1.01
CKS1B-206ENST00000474215 CFHR3Q02985 330 aa8.77□□□□□ -1.01
CKS1B-206ENST00000474215 ARFRP1Q13795 201 aa8.77□□□□□ -1.01
CKS1B-206ENST00000474215 NEDD8Q15843 81 aa8.77□□□□□ -1.01
CKS1B-206ENST00000474215 SRSF7Q16629 238 aaKnown RBP eCLIP8.77□□□□□ -1.01
CKS1B-206ENST00000474215 CDNFQ49AH0 187 aa8.77□□□□□ -1.01
CKS1B-206ENST00000474215 IGSF11Q5DX21 431 aa8.77□□□□□ -1.01
CKS1B-206ENST00000474215 CXorf66Q5JRM2 361 aaPredicted RBP8.77□□□□□ -1.01
CKS1B-206ENST00000474215 GLDNQ6ZMI3 551 aaPredicted RBP8.77□□□□□ -1.01
CKS1B-206ENST00000474215 ETV3LQ6ZN32 361 aa8.77□□□□□ -1.01
CKS1B-206ENST00000474215 C18orf65Q6ZTR6 163 aa8.77□□□□□ -1.01
CKS1B-206ENST00000474215 C8orf86Q6ZUL3 223 aa8.77□□□□□ -1.01
CKS1B-206ENST00000474215 MRPL41Q8IXM3 137 aaKnown RBP8.77□□□□□ -1.01
CKS1B-206ENST00000474215 LINC00482Q8N8I6 264 aa8.77□□□□□ -1.01
CKS1B-206ENST00000474215 RNF152Q8N8N0 203 aa8.77□□□□□ -1.01
CKS1B-206ENST00000474215 DRAXINQ8NBI3 349 aaPredicted RBP8.77□□□□□ -1.01
CKS1B-206ENST00000474215 OR10J5Q8NHC4 309 aa8.77□□□□□ -1.01
CKS1B-206ENST00000474215 RCC1LQ96I51 464 aaKnown RBP8.77□□□□□ -1.01
CKS1B-206ENST00000474215 KCTD7Q96MP8 289 aa8.77□□□□□ -1.01
CKS1B-206ENST00000474215 RNF5Q99942 180 aa8.77□□□□□ -1.01
CKS1B-206ENST00000474215 CENPOQ9BU64 300 aa8.77□□□□□ -1.01
CKS1B-206ENST00000474215 OR51J1Q9H342 316 aa8.77□□□□□ -1.01
CKS1B-206ENST00000474215 NECAP2Q9NVZ3 263 aa8.77□□□□□ -1.01
CKS1B-206ENST00000474215 KIAA1456Q9P272 454 aa8.77□□□□□ -1.01
CKS1B-206ENST00000474215 ZNF230Q9UIE0 474 aaPredicted RBP8.77□□□□□ -1.01
CKS1B-206ENST00000474215 DAPK2Q9UIK4 370 aa8.77□□□□□ -1.01
CKS1B-206ENST00000474215 WASHC3Q9Y3C0 194 aa8.77□□□□□ -1.01
CKS1B-206ENST00000474215 TRBV6-7A0A0A0MS04 114 aa8.76□□□□□ -1.01
CKS1B-206ENST00000474215 IGHV7-81A0A0B4J1V7 117 aa8.76□□□□□ -1.01
CKS1B-206ENST00000474215 RRHO14718 337 aa8.76□□□□□ -1.01
CKS1B-206ENST00000474215 OR8U9P0C7N5 309 aa8.76□□□□□ -1.01
CKS1B-206ENST00000474215 SNRPBP14678 240 aaKnown RBP8.76□□□□□ -1.01
CKS1B-206ENST00000474215 CD36P16671 472 aa8.76□□□□□ -1.01
CKS1B-206ENST00000474215 FOXB2Q5VYV0 432 aa8.76□□□□□ -1.01
CKS1B-206ENST00000474215 SFXN4Q6P4A7 337 aa8.76□□□□□ -1.01
CKS1B-206ENST00000474215 Q6ZS49 121 aa8.76□□□□□ -1.01
CKS1B-206ENST00000474215 LCNL1Q6ZST4 164 aa8.76□□□□□ -1.01
CKS1B-206ENST00000474215 ZNF436-AS1Q8NC38 126 aaPredicted RBP8.76□□□□□ -1.01
CKS1B-206ENST00000474215 OR8U1Q8NH10 309 aa8.76□□□□□ -1.01
CKS1B-206ENST00000474215 MAFIPQ8WZ33 124 aa8.76□□□□□ -1.01
CKS1B-206ENST00000474215 CABLES2Q9BTV7 478 aa8.76□□□□□ -1.01
CKS1B-206ENST00000474215 FBXL15Q9H469 300 aa8.76□□□□□ -1.01
CKS1B-206ENST00000474215 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP8.76□□□□□ -1.01
CKS1B-206ENST00000474215 GAB2Q9UQC2 676 aa8.76□□□□□ -1.01
CKS1B-206ENST00000474215 WSB1Q9Y6I7 421 aa8.76□□□□□ -1.01
CKS1B-206ENST00000474215 TRAV41A0A0B4J266 112 aa8.75□□□□□ -1.01
CKS1B-206ENST00000474215 LOC100506127A0A0U1RQW1 187 aa8.75□□□□□ -1.01
CKS1B-206ENST00000474215 G3V318 75 aa8.75□□□□□ -1.01
CKS1B-206ENST00000474215 M0R1X1 148 aa8.75□□□□□ -1.01
CKS1B-206ENST00000474215 CCL24O00175 119 aa8.75□□□□□ -1.01
CKS1B-206ENST00000474215 ATP6V0E1O15342 81 aa8.75□□□□□ -1.01
CKS1B-206ENST00000474215 SCGNO76038 276 aa8.75□□□□□ -1.01
CKS1B-206ENST00000474215 TFAP2AP05549 437 aa8.75□□□□□ -1.01
CKS1B-206ENST00000474215 CLEC2LP0C7M8 214 aa8.75□□□□□ -1.01
CKS1B-206ENST00000474215 DTYMKP23919 212 aa8.75□□□□□ -1.01
CKS1B-206ENST00000474215 PSMB8P28062 276 aa8.75□□□□□ -1.01
CKS1B-206ENST00000474215 PPIFP30405 207 aaKnown RBP8.75□□□□□ -1.01
CKS1B-206ENST00000474215 LINC00205P59089 165 aa8.75□□□□□ -1.01
CKS1B-206ENST00000474215 MXD1Q05195 221 aa8.75□□□□□ -1.01
CKS1B-206ENST00000474215 PLGLAQ15195 96 aa8.75□□□□□ -1.01
CKS1B-206ENST00000474215 HACD4Q5VWC8 232 aa8.75□□□□□ -1.01
CKS1B-206ENST00000474215 ZNF660Q6AZW8 331 aaPredicted RBP8.75□□□□□ -1.01
CKS1B-206ENST00000474215 TMEM65Q6PI78 240 aa8.75□□□□□ -1.01
CKS1B-206ENST00000474215 ZNF383Q8NA42 475 aa8.75□□□□□ -1.01
CKS1B-206ENST00000474215 RAX2Q96IS3 184 aa8.75□□□□□ -1.01
CKS1B-206ENST00000474215 P2RX4Q99571 388 aa8.75□□□□□ -1.01
CKS1B-206ENST00000474215 ST6GALNAC5Q9BVH7 336 aa8.75□□□□□ -1.01
CKS1B-206ENST00000474215 RNF167Q9H6Y7 350 aa8.75□□□□□ -1.01
CKS1B-206ENST00000474215 PARP11Q9NR21 331 aa8.75□□□□□ -1.01
CKS1B-206ENST00000474215 ELF5Q9UKW6 265 aaPredicted RBP8.75□□□□□ -1.01
CKS1B-206ENST00000474215 NOTCH3Q9UM47 2321 aa8.75□□□□□ -1.01
CKS1B-206ENST00000474215 FCN1O00602 326 aa8.74□□□□□ -1.01
CKS1B-206ENST00000474215 IGLV1-40P01703 118 aa8.74□□□□□ -1.01
CKS1B-206ENST00000474215 APOA2P02652 100 aa8.74□□□□□ -1.01
CKS1B-206ENST00000474215 IGKV1-16P04430 117 aa8.74□□□□□ -1.01
CKS1B-206ENST00000474215 SCAND1P57086 179 aa8.74□□□□□ -1.01
CKS1B-206ENST00000474215 RPS16P62249 146 aaKnown RBP8.74□□□□□ -1.01
CKS1B-206ENST00000474215 CX3CL1P78423 397 aa8.74□□□□□ -1.01
CKS1B-206ENST00000474215 PITPNAQ00169 270 aa8.74□□□□□ -1.01
CKS1B-206ENST00000474215 PSG5Q15238 335 aa8.74□□□□□ -1.01
CKS1B-206ENST00000474215 PDPNQ86YL7 162 aa8.74□□□□□ -1.01
CKS1B-206ENST00000474215 MINDY2Q8NBR6 621 aa8.74□□□□□ -1.01
CKS1B-206ENST00000474215 LGALS14Q8TCE9 139 aa8.74□□□□□ -1.01
CKS1B-206ENST00000474215 FLYWCH2Q96CP2 140 aaKnown RBP8.74□□□□□ -1.01
CKS1B-206ENST00000474215 DUX3Q96PT4 197 aa8.74□□□□□ -1.01
CKS1B-206ENST00000474215 TSNAXQ99598 290 aaKnown RBP8.74□□□□□ -1.01
CKS1B-206ENST00000474215 GINS4Q9BRT9 223 aa8.74□□□□□ -1.01
CKS1B-206ENST00000474215 MCRIP2Q9BUT9 160 aaKnown RBP8.74□□□□□ -1.01
CKS1B-206ENST00000474215 OR2D2Q9H210 308 aa8.74□□□□□ -1.01
CKS1B-206ENST00000474215 DCSTAMPQ9H295 470 aa8.74□□□□□ -1.01
CKS1B-206ENST00000474215 KLK15Q9H2R5 256 aa8.74□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms