RNA–Protein interactions for RNA: ENST00000473345.5

MCF2L-223, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 399 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-223ENST00000473345 LINC00205P59089 165 aa7.33□□□□□ -1.24
MCF2L-223ENST00000473345 CX3CL1P78423 397 aa7.33□□□□□ -1.24
MCF2L-223ENST00000473345 TMEM30BQ3MIR4 351 aa7.33□□□□□ -1.24
MCF2L-223ENST00000473345 Q3ZCU0 254 aa7.33□□□□□ -1.24
MCF2L-223ENST00000473345 Q499Y3 187 aa7.33□□□□□ -1.24
MCF2L-223ENST00000473345 MORN2Q502X0 79 aa7.33□□□□□ -1.24
MCF2L-223ENST00000473345 ATAD3CQ5T2N8 411 aa7.33□□□□□ -1.24
MCF2L-223ENST00000473345 C22orf42Q6IC83 251 aa7.33□□□□□ -1.24
MCF2L-223ENST00000473345 TMEM65Q6PI78 240 aa7.33□□□□□ -1.24
MCF2L-223ENST00000473345 GLDNQ6ZMI3 551 aaPredicted RBP7.33□□□□□ -1.24
MCF2L-223ENST00000473345 LINC00322Q6ZN03 302 aaPredicted RBP7.33□□□□□ -1.24
MCF2L-223ENST00000473345 LINC00299Q6ZSB3 139 aa7.33□□□□□ -1.24
MCF2L-223ENST00000473345 TPRA1Q86W33 373 aa7.33□□□□□ -1.24
MCF2L-223ENST00000473345 NPBQ8NG41 125 aa7.33□□□□□ -1.24
MCF2L-223ENST00000473345 OR6Q1Q8NGQ2 317 aa7.33□□□□□ -1.24
MCF2L-223ENST00000473345 GPR148Q8TDV2 347 aa7.33□□□□□ -1.24
MCF2L-223ENST00000473345 THRSPQ92748 146 aa7.33□□□□□ -1.24
MCF2L-223ENST00000473345 RHOVQ96L33 236 aa7.33□□□□□ -1.24
MCF2L-223ENST00000473345 SLIRPQ9GZT3 109 aaKnown RBP7.33□□□□□ -1.24
MCF2L-223ENST00000473345 NXF2Q9GZY0 626 aaKnown RBP7.33□□□□□ -1.24
MCF2L-223ENST00000473345 DCSTAMPQ9H295 470 aa7.33□□□□□ -1.24
MCF2L-223ENST00000473345 FBXL15Q9H469 300 aa7.33□□□□□ -1.24
MCF2L-223ENST00000473345 RAB9BQ9NP90 201 aa7.33□□□□□ -1.24
MCF2L-223ENST00000473345 GNG12Q9UBI6 72 aa7.33□□□□□ -1.24
MCF2L-223ENST00000473345 ING4Q9UNL4 249 aa7.33□□□□□ -1.24
MCF2L-223ENST00000473345 DHDHQ9UQ10 334 aa7.33□□□□□ -1.24
MCF2L-223ENST00000473345 A3GALT2U3KPV4 340 aa7.33□□□□□ -1.24
MCF2L-223ENST00000473345 PLECQ15149 4684 aaKnown RBP7.33□□□□□ -1.24
MCF2L-223ENST00000473345 TRAV8-7A0A075B6U6 113 aa7.32□□□□□ -1.24
MCF2L-223ENST00000473345 SAA2-SAA4A0A096LPE2 208 aa7.32□□□□□ -1.24
MCF2L-223ENST00000473345 PROP1O75360 226 aa7.32□□□□□ -1.24
MCF2L-223ENST00000473345 TRBV12-3P01733 135 aa7.32□□□□□ -1.24
MCF2L-223ENST00000473345 OR8U9P0C7N5 309 aa7.32□□□□□ -1.24
MCF2L-223ENST00000473345 SAA2P0DJI9 122 aaPredicted RBP7.32□□□□□ -1.24
MCF2L-223ENST00000473345 OR5H8P0DN80 308 aa7.32□□□□□ -1.24
MCF2L-223ENST00000473345 IL3RAP26951 378 aa7.32□□□□□ -1.24
MCF2L-223ENST00000473345 SLC22A6Q4U2R8 563 aa7.32□□□□□ -1.24
MCF2L-223ENST00000473345 LIN54Q6MZP7 749 aa7.32□□□□□ -1.24
MCF2L-223ENST00000473345 ZNF833PQ6ZTB9 187 aa7.32□□□□□ -1.24
MCF2L-223ENST00000473345 CEACAM19Q7Z692 300 aa7.32□□□□□ -1.24
MCF2L-223ENST00000473345 LINC00596Q86U02 117 aa7.32□□□□□ -1.24
MCF2L-223ENST00000473345 LYPD6Q86Y78 171 aa7.32□□□□□ -1.24
MCF2L-223ENST00000473345 TSEN15Q8WW01 171 aaKnown RBP7.32□□□□□ -1.24
MCF2L-223ENST00000473345 DERL3Q96Q80 235 aa7.32□□□□□ -1.24
MCF2L-223ENST00000473345 GPER1Q99527 375 aa7.32□□□□□ -1.24
MCF2L-223ENST00000473345 WFDC10AQ9H1F0 79 aa7.32□□□□□ -1.24
MCF2L-223ENST00000473345 HIPK2Q9H2X6 1198 aa7.32□□□□□ -1.24
MCF2L-223ENST00000473345 IFI27L2Q9H2X8 130 aa7.32□□□□□ -1.24
MCF2L-223ENST00000473345 CCDC59Q9P031 241 aaKnown RBP7.32□□□□□ -1.24
MCF2L-223ENST00000473345 A0A075B6Q4 140 aa7.31□□□□□ -1.24
MCF2L-223ENST00000473345 ARPC1BO15143 372 aaKnown RBP7.31□□□□□ -1.24
MCF2L-223ENST00000473345 MAGEB3O15480 346 aa7.31□□□□□ -1.24
MCF2L-223ENST00000473345 HSPA12AO43301 675 aa7.31□□□□□ -1.24
MCF2L-223ENST00000473345 TXNL1O43396 289 aa7.31□□□□□ -1.24
MCF2L-223ENST00000473345 ARL6IP5O75915 188 aa7.31□□□□□ -1.24
MCF2L-223ENST00000473345 HSPB1P04792 205 aaKnown RBP7.31□□□□□ -1.24
MCF2L-223ENST00000473345 CT45A6P0DMU7 189 aa7.31□□□□□ -1.24
MCF2L-223ENST00000473345 CT45A5P0DMU8 189 aa7.31□□□□□ -1.24
MCF2L-223ENST00000473345 CT45A7P0DMV0 189 aa7.31□□□□□ -1.24
MCF2L-223ENST00000473345 ARSBP15848 533 aa7.31□□□□□ -1.24
MCF2L-223ENST00000473345 IGFBP3P17936 291 aaPredicted RBP7.31□□□□□ -1.24
MCF2L-223ENST00000473345 FSTP19883 344 aa7.31□□□□□ -1.24
MCF2L-223ENST00000473345 EDN2P20800 178 aa7.31□□□□□ -1.24
MCF2L-223ENST00000473345 MAPK3P27361 379 aaPredicted RBP7.31□□□□□ -1.24
MCF2L-223ENST00000473345 SDC2P34741 201 aa7.31□□□□□ -1.24
MCF2L-223ENST00000473345 SERPINB10P48595 397 aa7.31□□□□□ -1.24
MCF2L-223ENST00000473345 RPL39P5Q59GN2 51 aa7.31□□□□□ -1.24
MCF2L-223ENST00000473345 DDI2Q5TDH0 399 aa7.31□□□□□ -1.24
MCF2L-223ENST00000473345 FAM131AQ6UXB0 335 aa7.31□□□□□ -1.24
MCF2L-223ENST00000473345 NR2C2APQ86WQ0 139 aa7.31□□□□□ -1.24
MCF2L-223ENST00000473345 MRPL30Q8TCC3 161 aaKnown RBP7.31□□□□□ -1.24
MCF2L-223ENST00000473345 SLC25A46Q96AG3 418 aa7.31□□□□□ -1.24
MCF2L-223ENST00000473345 OR14A2Q96R54 314 aa7.31□□□□□ -1.24
MCF2L-223ENST00000473345 SPATA25Q9BR10 227 aa7.31□□□□□ -1.24
MCF2L-223ENST00000473345 DCUN1D5Q9BTE7 237 aa7.31□□□□□ -1.24
MCF2L-223ENST00000473345 METTL9Q9H1A3 318 aa7.31□□□□□ -1.24
MCF2L-223ENST00000473345 BANF2Q9H503 90 aa7.31□□□□□ -1.24
MCF2L-223ENST00000473345 TAF9BQ9HBM6 251 aa7.31□□□□□ -1.24
MCF2L-223ENST00000473345 MBNL3Q9NUK0 354 aaKnown RBP7.31□□□□□ -1.24
MCF2L-223ENST00000473345 FOXA2Q9Y261 457 aaPredicted RBP7.31□□□□□ -1.24
MCF2L-223ENST00000473345 UBE2QL1A1L167 161 aa7.3□□□□□ -1.24
MCF2L-223ENST00000473345 RBMY1BA6NDE4 496 aaKnown RBP7.3□□□□□ -1.24
MCF2L-223ENST00000473345 RBMY1EA6NEQ0 496 aaKnown RBP7.3□□□□□ -1.24
MCF2L-223ENST00000473345 RRHO14718 337 aa7.3□□□□□ -1.24
MCF2L-223ENST00000473345 TMEM127O75204 238 aa7.3□□□□□ -1.24
MCF2L-223ENST00000473345 ZNF780AO75290 641 aaPredicted RBP7.3□□□□□ -1.24
MCF2L-223ENST00000473345 BRI3O95415 125 aa7.3□□□□□ -1.24
MCF2L-223ENST00000473345 RBMY1DP0C7P1 496 aaKnown RBP7.3□□□□□ -1.24
MCF2L-223ENST00000473345 SRMP19623 302 aa7.3□□□□□ -1.24
MCF2L-223ENST00000473345 ZNF93P35789 620 aaPredicted RBP7.3□□□□□ -1.24
MCF2L-223ENST00000473345 PITPNAQ00169 270 aa7.3□□□□□ -1.24
MCF2L-223ENST00000473345 EWSR1Q01844 656 aaKnown RBP eCLIP7.3□□□□□ -1.24
MCF2L-223ENST00000473345 MPV17LQ2QL34 196 aa7.3□□□□□ -1.24
MCF2L-223ENST00000473345 RAB12Q6IQ22 244 aa7.3□□□□□ -1.24
MCF2L-223ENST00000473345 LRRTM1Q86UE6 522 aa7.3□□□□□ -1.24
MCF2L-223ENST00000473345 LFNGQ8NES3 379 aa7.3□□□□□ -1.24
MCF2L-223ENST00000473345 NEK7Q8TDX7 302 aa7.3□□□□□ -1.24
MCF2L-223ENST00000473345 TMEM106AQ96A25 262 aa7.3□□□□□ -1.24
MCF2L-223ENST00000473345 OR4C12Q96R67 309 aa7.3□□□□□ -1.24
MCF2L-223ENST00000473345 CLCC1Q96S66 551 aa7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms