RNA–Protein interactions for RNA: ENST00000473036.2

TPM3-216, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 746 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-216ENST00000473036 BTBD17A6NE02 478 aa10.47□□□□□ -0.73
TPM3-216ENST00000473036 OOSP1A8MZH6 123 aa10.47□□□□□ -0.73
TPM3-216ENST00000473036 ST8SIA5O15466 376 aa10.47□□□□□ -0.73
TPM3-216ENST00000473036 PROP1O75360 226 aa10.47□□□□□ -0.73
TPM3-216ENST00000473036 CEACAM3P40198 252 aa10.47□□□□□ -0.73
TPM3-216ENST00000473036 DEFA1P59665 94 aa10.47□□□□□ -0.73
TPM3-216ENST00000473036 DEFA3P59666 94 aa10.47□□□□□ -0.73
TPM3-216ENST00000473036 ARPC4P59998 168 aa10.47□□□□□ -0.73
TPM3-216ENST00000473036 RPL15P61313 204 aaKnown RBP10.47□□□□□ -0.73
TPM3-216ENST00000473036 DYRK1AQ13627 763 aa10.47□□□□□ -0.73
TPM3-216ENST00000473036 MEF2DQ14814 521 aa10.47□□□□□ -0.73
TPM3-216ENST00000473036 ZNF79Q15937 498 aa10.47□□□□□ -0.73
TPM3-216ENST00000473036 STEAP3Q658P3 488 aa10.47□□□□□ -0.73
TPM3-216ENST00000473036 DHRS7BQ6IAN0 325 aaPredicted RBP10.47□□□□□ -0.73
TPM3-216ENST00000473036 TMEM229BQ8NBD8 167 aa10.47□□□□□ -0.73
TPM3-216ENST00000473036 BEST4Q8NFU0 473 aa10.47□□□□□ -0.73
TPM3-216ENST00000473036 OR52I2Q8NH67 350 aa10.47□□□□□ -0.73
TPM3-216ENST00000473036 RPEQ96AT9 228 aa10.47□□□□□ -0.73
TPM3-216ENST00000473036 CREB3L1Q96BA8 519 aa10.47□□□□□ -0.73
TPM3-216ENST00000473036 ABHD14AQ9BUJ0 271 aa10.47□□□□□ -0.73
TPM3-216ENST00000473036 C11orf54Q9H0W9 315 aaPredicted RBP10.47□□□□□ -0.73
TPM3-216ENST00000473036 C16orf95Q9H693 158 aa10.47□□□□□ -0.73
TPM3-216ENST00000473036 ZNF702PQ9H963 129 aa10.47□□□□□ -0.73
TPM3-216ENST00000473036 ABCB10Q9NRK6 738 aa10.47□□□□□ -0.73
TPM3-216ENST00000473036 SLC23A1Q9UHI7 598 aa10.47□□□□□ -0.73
TPM3-216ENST00000473036 ANXA10Q9UJ72 324 aa10.47□□□□□ -0.73
TPM3-216ENST00000473036 ANAPC10Q9UM13 185 aa10.47□□□□□ -0.73
TPM3-216ENST00000473036 AMMECR1Q9Y4X0 333 aaPredicted RBP10.47□□□□□ -0.73
TPM3-216ENST00000473036 MMP24Q9Y5R2 645 aa10.47□□□□□ -0.73
TPM3-216ENST00000473036 NAP1L6A6NFF2 107 aa10.46□□□□□ -0.73
TPM3-216ENST00000473036 SH2D7A6NKC9 451 aaPredicted RBP10.46□□□□□ -0.73
TPM3-216ENST00000473036 FABP7O15540 132 aa10.46□□□□□ -0.73
TPM3-216ENST00000473036 RGS11O94810 467 aa10.46□□□□□ -0.73
TPM3-216ENST00000473036 IFNA6P05013 189 aa10.46□□□□□ -0.73
TPM3-216ENST00000473036 SNRNP70P08621 437 aaKnown RBP10.46□□□□□ -0.73
TPM3-216ENST00000473036 CEACAM6P40199 344 aa10.46□□□□□ -0.73
TPM3-216ENST00000473036 HIST2H2BDQ6DRA6 164 aa10.46□□□□□ -0.73
TPM3-216ENST00000473036 ZNF833PQ6ZTB9 187 aa10.46□□□□□ -0.73
TPM3-216ENST00000473036 LYG1Q8N1E2 194 aa10.46□□□□□ -0.73
TPM3-216ENST00000473036 GVQW1Q8N7I0 195 aa10.46□□□□□ -0.73
TPM3-216ENST00000473036 OR5AP2Q8NGF4 316 aa10.46□□□□□ -0.73
TPM3-216ENST00000473036 C5orf30Q96GV9 206 aa10.46□□□□□ -0.73
TPM3-216ENST00000473036 ABHD14BQ96IU4 210 aa10.46□□□□□ -0.73
TPM3-216ENST00000473036 RITA1Q96K30 269 aa10.46□□□□□ -0.73
TPM3-216ENST00000473036 CABLES2Q9BTV7 478 aa10.46□□□□□ -0.73
TPM3-216ENST00000473036 TOLLIPQ9H0E2 274 aa10.46□□□□□ -0.73
TPM3-216ENST00000473036 NECAP2Q9NVZ3 263 aa10.46□□□□□ -0.73
TPM3-216ENST00000473036 PRKDCP78527 4128 aaKnown RBP10.46□□□□□ -0.74
TPM3-216ENST00000473036 SAA2-SAA4A0A096LPE2 208 aa10.45□□□□□ -0.74
TPM3-216ENST00000473036 TRBV6-7A0A0A0MS04 114 aa10.45□□□□□ -0.74
TPM3-216ENST00000473036 ANKRD20A5PA0PJZ0 165 aa10.45□□□□□ -0.74
TPM3-216ENST00000473036 CLPSL1A2RUU4 121 aa10.45□□□□□ -0.74
TPM3-216ENST00000473036 UPK1BO75841 260 aa10.45□□□□□ -0.74
TPM3-216ENST00000473036 CRYBA1P05813 215 aa10.45□□□□□ -0.74
TPM3-216ENST00000473036 AKAIN1P0CW23 69 aa10.45□□□□□ -0.74
TPM3-216ENST00000473036 SAA2P0DJI9 122 aaPredicted RBP10.45□□□□□ -0.74
TPM3-216ENST00000473036 IL7P13232 177 aa10.45□□□□□ -0.74
TPM3-216ENST00000473036 RAB7AP51149 207 aa10.45□□□□□ -0.74
TPM3-216ENST00000473036 PROK1P58294 105 aa10.45□□□□□ -0.74
TPM3-216ENST00000473036 LINC00205P59089 165 aa10.45□□□□□ -0.74
TPM3-216ENST00000473036 DGCR2P98153 550 aa10.45□□□□□ -0.74
TPM3-216ENST00000473036 DCTN2Q13561 401 aaKnown RBP10.45□□□□□ -0.74
TPM3-216ENST00000473036 EBI3Q14213 229 aa10.45□□□□□ -0.74
TPM3-216ENST00000473036 RPL39P5Q59GN2 51 aa10.45□□□□□ -0.74
TPM3-216ENST00000473036 ZNF57Q68EA5 555 aaPredicted RBP10.45□□□□□ -0.74
TPM3-216ENST00000473036 MZT2BQ6NZ67 158 aa10.45□□□□□ -0.74
TPM3-216ENST00000473036 LIAT1Q6ZQX7 453 aa10.45□□□□□ -0.74
TPM3-216ENST00000473036 OR8H3Q8N146 312 aa10.45□□□□□ -0.74
TPM3-216ENST00000473036 Q8N6K4 173 aa10.45□□□□□ -0.74
TPM3-216ENST00000473036 OR5H2Q8NGV7 314 aa10.45□□□□□ -0.74
TPM3-216ENST00000473036 CAPSLQ8WWF8 208 aa10.45□□□□□ -0.74
TPM3-216ENST00000473036 RBM14Q96PK6 669 aaKnown RBP10.45□□□□□ -0.74
TPM3-216ENST00000473036 GHITMQ9H3K2 345 aa10.45□□□□□ -0.74
TPM3-216ENST00000473036 RDH8Q9NYR8 311 aa10.45□□□□□ -0.74
TPM3-216ENST00000473036 KLK11Q9UBX7 282 aa10.45□□□□□ -0.74
TPM3-216ENST00000473036 DISC1C4P0D8 188 aa10.44□□□□□ -0.74
TPM3-216ENST00000473036 ITGB1BP1O14713 200 aa10.44□□□□□ -0.74
TPM3-216ENST00000473036 LANCL1O43813 399 aa10.44□□□□□ -0.74
TPM3-216ENST00000473036 OR2F2O95006 317 aa10.44□□□□□ -0.74
TPM3-216ENST00000473036 IGKV1D-33P01593 117 aa10.44□□□□□ -0.74
TPM3-216ENST00000473036 IGKV1-33P01594 117 aa10.44□□□□□ -0.74
TPM3-216ENST00000473036 GAPDHP04406 335 aaKnown RBP10.44□□□□□ -0.74
TPM3-216ENST00000473036 ZBTB25P24278 435 aa10.44□□□□□ -0.74
TPM3-216ENST00000473036 BRS3P32247 399 aa10.44□□□□□ -0.74
TPM3-216ENST00000473036 ECI1P42126 302 aa10.44□□□□□ -0.74
TPM3-216ENST00000473036 CDK10Q15131 360 aa10.44□□□□□ -0.74
TPM3-216ENST00000473036 TMEM95Q3KNT9 176 aa10.44□□□□□ -0.74
TPM3-216ENST00000473036 RNASE10Q5GAN6 216 aaKnown RBP10.44□□□□□ -0.74
TPM3-216ENST00000473036 VAX1Q5SQQ9 334 aa10.44□□□□□ -0.74
TPM3-216ENST00000473036 CCDC144NLQ6NUI1 221 aa10.44□□□□□ -0.74
TPM3-216ENST00000473036 STEAP1BQ6NZ63 245 aa10.44□□□□□ -0.74
TPM3-216ENST00000473036 MOB3BQ86TA1 216 aa10.44□□□□□ -0.74
TPM3-216ENST00000473036 THNSL2Q86YJ6 484 aa10.44□□□□□ -0.74
TPM3-216ENST00000473036 Q8N2B8 174 aa10.44□□□□□ -0.74
TPM3-216ENST00000473036 ARRDC1Q8N5I2 433 aa10.44□□□□□ -0.74
TPM3-216ENST00000473036 OR2AK2Q8NG84 335 aa10.44□□□□□ -0.74
TPM3-216ENST00000473036 OR4F5Q8NH21 305 aa10.44□□□□□ -0.74
TPM3-216ENST00000473036 OR10J5Q8NHC4 309 aa10.44□□□□□ -0.74
TPM3-216ENST00000473036 WFDC12Q8WWY7 111 aa10.44□□□□□ -0.74
TPM3-216ENST00000473036 NABP2Q9BQ15 211 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms