RNA–Protein interactions for RNA: ENST00000472217.1

USF1-204, Transcript of upstream transcription factor 1, humanhuman

TSL 2

Gene USF1, Length 1,097 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-204ENST00000472217 RANBP1P43487 201 aa7.03□□□□□ -1.28
USF1-204ENST00000472217 LUMP51884 338 aaPredicted RBP7.03□□□□□ -1.28
USF1-204ENST00000472217 GABARAPL2P60520 117 aa7.03□□□□□ -1.28
USF1-204ENST00000472217 CX3CL1P78423 397 aa7.03□□□□□ -1.28
USF1-204ENST00000472217 FHL3Q13643 280 aa7.03□□□□□ -1.28
USF1-204ENST00000472217 KIAA0141Q14154 515 aaPredicted RBP7.03□□□□□ -1.28
USF1-204ENST00000472217 PLGLAQ15195 96 aa7.03□□□□□ -1.28
USF1-204ENST00000472217 C19orf54Q5BKX5 351 aa7.03□□□□□ -1.28
USF1-204ENST00000472217 DEFB121Q5J5C9 76 aa7.03□□□□□ -1.28
USF1-204ENST00000472217 TMEM65Q6PI78 240 aa7.03□□□□□ -1.28
USF1-204ENST00000472217 ZNF491Q8N8L2 437 aa7.03□□□□□ -1.28
USF1-204ENST00000472217 DRAXINQ8NBI3 349 aaPredicted RBP7.03□□□□□ -1.28
USF1-204ENST00000472217 MINDY2Q8NBR6 621 aa7.03□□□□□ -1.28
USF1-204ENST00000472217 OR5M8Q8NGP6 311 aa7.03□□□□□ -1.28
USF1-204ENST00000472217 PTX4Q96A99 478 aa7.03□□□□□ -1.28
USF1-204ENST00000472217 RAB3CQ96E17 227 aa7.03□□□□□ -1.28
USF1-204ENST00000472217 FBXL15Q9H469 300 aa7.03□□□□□ -1.28
USF1-204ENST00000472217 GNB4Q9HAV0 340 aa7.03□□□□□ -1.28
USF1-204ENST00000472217 RAB22AQ9UL26 194 aa7.03□□□□□ -1.28
USF1-204ENST00000472217 RNF150Q9ULK6 438 aa7.03□□□□□ -1.28
USF1-204ENST00000472217 WASHC3Q9Y3C0 194 aa7.03□□□□□ -1.28
USF1-204ENST00000472217 A0A0B4J203 849 aa7.02□□□□□ -1.29
USF1-204ENST00000472217 TRDV1A0A1B0GX56 115 aa7.02□□□□□ -1.29
USF1-204ENST00000472217 IFITM5A6NNB3 132 aa7.02□□□□□ -1.29
USF1-204ENST00000472217 TRDCB7Z8K6 153 aa7.02□□□□□ -1.29
USF1-204ENST00000472217 I3L521 148 aa7.02□□□□□ -1.29
USF1-204ENST00000472217 MFNGO00587 321 aa7.02□□□□□ -1.29
USF1-204ENST00000472217 FCN1O00602 326 aa7.02□□□□□ -1.29
USF1-204ENST00000472217 FABP7O15540 132 aa7.02□□□□□ -1.29
USF1-204ENST00000472217 SOX15O60248 233 aa7.02□□□□□ -1.29
USF1-204ENST00000472217 RBBP9O75884 186 aa7.02□□□□□ -1.29
USF1-204ENST00000472217 ATP6V1G2O95670 118 aa7.02□□□□□ -1.29
USF1-204ENST00000472217 IGKV1-16P04430 117 aa7.02□□□□□ -1.29
USF1-204ENST00000472217 FCGR3AP08637 254 aa7.02□□□□□ -1.29
USF1-204ENST00000472217 GSTP1P09211 210 aaKnown RBP7.02□□□□□ -1.29
USF1-204ENST00000472217 CD3GP09693 182 aa7.02□□□□□ -1.29
USF1-204ENST00000472217 SNRPBP14678 240 aaKnown RBP7.02□□□□□ -1.29
USF1-204ENST00000472217 RAB3BP20337 219 aa7.02□□□□□ -1.29
USF1-204ENST00000472217 MYL9P24844 172 aa7.02□□□□□ -1.29
USF1-204ENST00000472217 CRIP2P52943 208 aaPredicted RBP7.02□□□□□ -1.29
USF1-204ENST00000472217 LINC00205P59089 165 aa7.02□□□□□ -1.29
USF1-204ENST00000472217 MRPS15P82914 257 aaKnown RBP7.02□□□□□ -1.29
USF1-204ENST00000472217 DGCR2P98153 550 aa7.02□□□□□ -1.29
USF1-204ENST00000472217 ECSCRQ19T08 205 aa7.02□□□□□ -1.29
USF1-204ENST00000472217 IGSF11Q5DX21 431 aa7.02□□□□□ -1.29
USF1-204ENST00000472217 C22orf42Q6IC83 251 aa7.02□□□□□ -1.29
USF1-204ENST00000472217 NR2C2APQ86WQ0 139 aa7.02□□□□□ -1.29
USF1-204ENST00000472217 ZNF383Q8NA42 475 aa7.02□□□□□ -1.29
USF1-204ENST00000472217 OR11H1Q8NG94 326 aa7.02□□□□□ -1.29
USF1-204ENST00000472217 OR4A4PQ8NGN8 299 aa7.02□□□□□ -1.29
USF1-204ENST00000472217 OR10R2Q8NGX6 335 aa7.02□□□□□ -1.29
USF1-204ENST00000472217 MAFIPQ8WZ33 124 aa7.02□□□□□ -1.29
USF1-204ENST00000472217 UBE2E2Q96LR5 201 aa7.02□□□□□ -1.29
USF1-204ENST00000472217 OR5B12Q96R08 314 aa7.02□□□□□ -1.29
USF1-204ENST00000472217 RDH8Q9NYR8 311 aa7.02□□□□□ -1.29
USF1-204ENST00000472217 ZNF221Q9UK13 617 aa7.02□□□□□ -1.29
USF1-204ENST00000472217 GAB2Q9UQC2 676 aa7.02□□□□□ -1.29
USF1-204ENST00000472217 A0A075B6Q4 140 aa7.01□□□□□ -1.29
USF1-204ENST00000472217 A0A1W2PN81 502 aa7.01□□□□□ -1.29
USF1-204ENST00000472217 SMIM30A4D0T7 59 aa7.01□□□□□ -1.29
USF1-204ENST00000472217 SEC14L6B5MCN3 397 aa7.01□□□□□ -1.29
USF1-204ENST00000472217 M0R1X1 148 aa7.01□□□□□ -1.29
USF1-204ENST00000472217 RAB27BO00194 218 aa7.01□□□□□ -1.29
USF1-204ENST00000472217 BET1O15155 118 aa7.01□□□□□ -1.29
USF1-204ENST00000472217 TFAP2AP05549 437 aa7.01□□□□□ -1.29
USF1-204ENST00000472217 EGR2P11161 476 aaPredicted RBP7.01□□□□□ -1.29
USF1-204ENST00000472217 HIST1H1DP16402 221 aaKnown RBP7.01□□□□□ -1.29
USF1-204ENST00000472217 GNB3P16520 340 aa7.01□□□□□ -1.29
USF1-204ENST00000472217 RAB6AP20340 208 aa7.01□□□□□ -1.29
USF1-204ENST00000472217 GALP22466 123 aa7.01□□□□□ -1.29
USF1-204ENST00000472217 GADD45AP24522 165 aa7.01□□□□□ -1.29
USF1-204ENST00000472217 CHRNA7P36544 502 aa7.01□□□□□ -1.29
USF1-204ENST00000472217 SERPINB10P48595 397 aa7.01□□□□□ -1.29
USF1-204ENST00000472217 RAB9AP51151 201 aa7.01□□□□□ -1.29
USF1-204ENST00000472217 GNB1P62873 340 aa7.01□□□□□ -1.29
USF1-204ENST00000472217 RUNX1Q01196 453 aa7.01□□□□□ -1.29
USF1-204ENST00000472217 ZNF616Q08AN1 781 aa7.01□□□□□ -1.29
USF1-204ENST00000472217 PSG5Q15238 335 aa7.01□□□□□ -1.29
USF1-204ENST00000472217 C9orf66Q5T8R8 295 aa7.01□□□□□ -1.29
USF1-204ENST00000472217 ASPHD1Q5U4P2 390 aa7.01□□□□□ -1.29
USF1-204ENST00000472217 UBE2UQ5VVX9 321 aa7.01□□□□□ -1.29
USF1-204ENST00000472217 ZNF660Q6AZW8 331 aaPredicted RBP7.01□□□□□ -1.29
USF1-204ENST00000472217 ZNF436-AS1Q8NC38 126 aaPredicted RBP7.01□□□□□ -1.29
USF1-204ENST00000472217 ABHD5Q8WTS1 349 aa7.01□□□□□ -1.29
USF1-204ENST00000472217 CASTOR1Q8WTX7 329 aa7.01□□□□□ -1.29
USF1-204ENST00000472217 RNF5Q99942 180 aa7.01□□□□□ -1.29
USF1-204ENST00000472217 CABLES2Q9BTV7 478 aa7.01□□□□□ -1.29
USF1-204ENST00000472217 TOLLIPQ9H0E2 274 aa7.01□□□□□ -1.29
USF1-204ENST00000472217 TPSG1Q9NRR2 321 aa7.01□□□□□ -1.29
USF1-204ENST00000472217 PLA2G2EQ9NZK7 142 aa7.01□□□□□ -1.29
USF1-204ENST00000472217 METTL1Q9UBP6 276 aaKnown RBP7.01□□□□□ -1.29
USF1-204ENST00000472217 ZNF230Q9UIE0 474 aaPredicted RBP7.01□□□□□ -1.29
USF1-204ENST00000472217 FOXA2Q9Y261 457 aaPredicted RBP7.01□□□□□ -1.29
USF1-204ENST00000472217 VSIG4Q9Y279 399 aa7.01□□□□□ -1.29
USF1-204ENST00000472217 A3GALT2U3KPV4 340 aa7.01□□□□□ -1.29
USF1-204ENST00000472217 TRBV6-7A0A0A0MS04 114 aa7□□□□□ -1.29
USF1-204ENST00000472217 METTL21EPA6NDL7 271 aa7□□□□□ -1.29
USF1-204ENST00000472217 MRPS14O60783 128 aaKnown RBP7□□□□□ -1.29
USF1-204ENST00000472217 RAMP3O60896 148 aa7□□□□□ -1.29
USF1-204ENST00000472217 SPDEFO95238 335 aa7□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms