RNA–Protein interactions for RNA: ENST00000471752.1

USP48-207, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 3

Gene USP48, Length 445 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-207ENST00000471752 SBSPONQ8IVN8 264 aa6.23□□□□□ -1.41
USP48-207ENST00000471752 LFNGQ8NES3 379 aa6.23□□□□□ -1.41
USP48-207ENST00000471752 OR2AK2Q8NG84 335 aa6.23□□□□□ -1.41
USP48-207ENST00000471752 OR8H1Q8NGG4 311 aa6.23□□□□□ -1.41
USP48-207ENST00000471752 OR5M8Q8NGP6 311 aa6.23□□□□□ -1.41
USP48-207ENST00000471752 GALMQ96C23 342 aa6.23□□□□□ -1.41
USP48-207ENST00000471752 UBE2E2Q96LR5 201 aa6.23□□□□□ -1.41
USP48-207ENST00000471752 MCRIP2Q9BUT9 160 aaKnown RBP6.23□□□□□ -1.41
USP48-207ENST00000471752 TMEM59Q9BXS4 323 aa6.23□□□□□ -1.41
USP48-207ENST00000471752 PECRQ9BY49 303 aa6.23□□□□□ -1.41
USP48-207ENST00000471752 TOLLIPQ9H0E2 274 aa6.23□□□□□ -1.41
USP48-207ENST00000471752 DUSP21Q9H596 190 aa6.23□□□□□ -1.41
USP48-207ENST00000471752 CHMP1AQ9HD42 196 aaPredicted RBP6.23□□□□□ -1.41
USP48-207ENST00000471752 SLC23A1Q9UHI7 598 aa6.23□□□□□ -1.41
USP48-207ENST00000471752 ZNF230Q9UIE0 474 aaPredicted RBP6.23□□□□□ -1.41
USP48-207ENST00000471752 JPT1Q9UK76 154 aa6.23□□□□□ -1.41
USP48-207ENST00000471752 VSIG4Q9Y279 399 aa6.23□□□□□ -1.41
USP48-207ENST00000471752 TMEM272A0A1B0GTI8 110 aa6.22□□□□□ -1.41
USP48-207ENST00000471752 A0A1W2PN81 502 aa6.22□□□□□ -1.41
USP48-207ENST00000471752 SMIM30A4D0T7 59 aa6.22□□□□□ -1.41
USP48-207ENST00000471752 SRRM4A7MD48 611 aaKnown RBP6.22□□□□□ -1.41
USP48-207ENST00000471752 RRHO14718 337 aa6.22□□□□□ -1.41
USP48-207ENST00000471752 TXNL1O43396 289 aa6.22□□□□□ -1.41
USP48-207ENST00000471752 IGLV2-23P01705 113 aa6.22□□□□□ -1.41
USP48-207ENST00000471752 APELAP0DMC3 54 aa6.22□□□□□ -1.41
USP48-207ENST00000471752 SPNP16150 400 aa6.22□□□□□ -1.41
USP48-207ENST00000471752 CHRNA7P36544 502 aa6.22□□□□□ -1.41
USP48-207ENST00000471752 RUNX1Q01196 453 aa6.22□□□□□ -1.41
USP48-207ENST00000471752 MED21Q13503 144 aa6.22□□□□□ -1.41
USP48-207ENST00000471752 TPBGQ13641 420 aa6.22□□□□□ -1.41
USP48-207ENST00000471752 SSX1Q16384 188 aa6.22□□□□□ -1.41
USP48-207ENST00000471752 C4orf48Q5BLP8 95 aa6.22□□□□□ -1.41
USP48-207ENST00000471752 LY6G6FQ5SQ64 297 aa6.22□□□□□ -1.41
USP48-207ENST00000471752 HES5Q5TA89 166 aa6.22□□□□□ -1.41
USP48-207ENST00000471752 GLT8D1Q68CQ7 371 aa6.22□□□□□ -1.41
USP48-207ENST00000471752 MS4A15Q8N5U1 240 aa6.22□□□□□ -1.41
USP48-207ENST00000471752 NKAIN3Q8N8D7 197 aa6.22□□□□□ -1.41
USP48-207ENST00000471752 OR5T1Q8NG75 326 aa6.22□□□□□ -1.41
USP48-207ENST00000471752 OR5AN1Q8NGI8 311 aa6.22□□□□□ -1.41
USP48-207ENST00000471752 KCNG3Q8TAE7 436 aa6.22□□□□□ -1.41
USP48-207ENST00000471752 PHYHIPQ92561 330 aa6.22□□□□□ -1.41
USP48-207ENST00000471752 WWC2-AS2Q96NR7 200 aa6.22□□□□□ -1.41
USP48-207ENST00000471752 MND1Q9BWT6 205 aa6.22□□□□□ -1.41
USP48-207ENST00000471752 CST11Q9H112 138 aa6.22□□□□□ -1.41
USP48-207ENST00000471752 Q9N2K0 584 aa6.22□□□□□ -1.41
USP48-207ENST00000471752 PLEKHJ1Q9NW61 149 aa6.22□□□□□ -1.41
USP48-207ENST00000471752 BIRC6Q9NR09 4857 aa6.22□□□□□ -1.41
USP48-207ENST00000471752 TRBV6-6A0A0A6YYG2 114 aa6.21□□□□□ -1.42
USP48-207ENST00000471752 J3QRK9 145 aa6.21□□□□□ -1.42
USP48-207ENST00000471752 SLC17A2O00624 439 aa6.21□□□□□ -1.42
USP48-207ENST00000471752 RRP9O43818 475 aaKnown RBP6.21□□□□□ -1.42
USP48-207ENST00000471752 LY86O95711 162 aa6.21□□□□□ -1.42
USP48-207ENST00000471752 BPNT1O95861 308 aa6.21□□□□□ -1.42
USP48-207ENST00000471752 CA2P00918 260 aa6.21□□□□□ -1.42
USP48-207ENST00000471752 TRBV12-3P01733 135 aa6.21□□□□□ -1.42
USP48-207ENST00000471752 GSTT2P0CG29 244 aa6.21□□□□□ -1.42
USP48-207ENST00000471752 GSTT2BP0CG30 244 aa6.21□□□□□ -1.42
USP48-207ENST00000471752 CALRP27797 417 aaKnown RBP6.21□□□□□ -1.42
USP48-207ENST00000471752 SLC6A1P30531 599 aa6.21□□□□□ -1.42
USP48-207ENST00000471752 ZNF616Q08AN1 781 aa6.21□□□□□ -1.42
USP48-207ENST00000471752 C9orf66Q5T8R8 295 aa6.21□□□□□ -1.42
USP48-207ENST00000471752 TMEM65Q6PI78 240 aa6.21□□□□□ -1.42
USP48-207ENST00000471752 TRAT1Q6PIZ9 186 aa6.21□□□□□ -1.42
USP48-207ENST00000471752 IL34Q6ZMJ4 242 aa6.21□□□□□ -1.42
USP48-207ENST00000471752 C19orf35Q6ZS72 473 aa6.21□□□□□ -1.42
USP48-207ENST00000471752 PPP1R27Q86WC6 154 aa6.21□□□□□ -1.42
USP48-207ENST00000471752 ARPC1AQ92747 370 aa6.21□□□□□ -1.42
USP48-207ENST00000471752 DPF1Q92782 380 aa6.21□□□□□ -1.42
USP48-207ENST00000471752 FAM3DQ96BQ1 224 aa6.21□□□□□ -1.42
USP48-207ENST00000471752 METTL1Q9UBP6 276 aaKnown RBP6.21□□□□□ -1.42
USP48-207ENST00000471752 GHRLQ9UBU3 117 aa6.21□□□□□ -1.42
USP48-207ENST00000471752 ZNF580Q9UK33 172 aa6.21□□□□□ -1.42
USP48-207ENST00000471752 ZNF256Q9Y2P7 627 aaPredicted RBP6.21□□□□□ -1.42
USP48-207ENST00000471752 U3KQK5 164 aa6.21□□□□□ -1.42
USP48-207ENST00000471752 TNCP24821 2201 aa6.2□□□□□ -1.42
USP48-207ENST00000471752 A0A075B6Q4 140 aa6.2□□□□□ -1.42
USP48-207ENST00000471752 ANKRD34BA5PLL1 514 aa6.2□□□□□ -1.42
USP48-207ENST00000471752 H7C2Y5 167 aa6.2□□□□□ -1.42
USP48-207ENST00000471752 OVOL1O14753 267 aa6.2□□□□□ -1.42
USP48-207ENST00000471752 RAB29O14966 203 aa6.2□□□□□ -1.42
USP48-207ENST00000471752 SLC25A17O43808 307 aa6.2□□□□□ -1.42
USP48-207ENST00000471752 SAP30O75446 220 aa6.2□□□□□ -1.42
USP48-207ENST00000471752 CRYGBP07316 175 aa6.2□□□□□ -1.42
USP48-207ENST00000471752 OR8U9P0C7N5 309 aa6.2□□□□□ -1.42
USP48-207ENST00000471752 UBBP0CG47 229 aa6.2□□□□□ -1.42
USP48-207ENST00000471752 ARSBP15848 533 aa6.2□□□□□ -1.42
USP48-207ENST00000471752 GNB3P16520 340 aa6.2□□□□□ -1.42
USP48-207ENST00000471752 CRHBPP24387 322 aa6.2□□□□□ -1.42
USP48-207ENST00000471752 MAPK3P27361 379 aaPredicted RBP6.2□□□□□ -1.42
USP48-207ENST00000471752 CRIP2P52943 208 aaPredicted RBP6.2□□□□□ -1.42
USP48-207ENST00000471752 RPS16P62249 146 aaKnown RBP6.2□□□□□ -1.42
USP48-207ENST00000471752 HLA-DRB3P79483 266 aa6.2□□□□□ -1.42
USP48-207ENST00000471752 RAB11BQ15907 218 aa6.2□□□□□ -1.42
USP48-207ENST00000471752 TMEM30BQ3MIR4 351 aa6.2□□□□□ -1.42
USP48-207ENST00000471752 ZNF660Q6AZW8 331 aaPredicted RBP6.2□□□□□ -1.42
USP48-207ENST00000471752 UNQ5815/PRO19632Q6UWF5 114 aa6.2□□□□□ -1.42
USP48-207ENST00000471752 ZNF554Q86TJ5 538 aa6.2□□□□□ -1.42
USP48-207ENST00000471752 Q8N1Y9 231 aa6.2□□□□□ -1.42
USP48-207ENST00000471752 OR6M1Q8NGM8 313 aa6.2□□□□□ -1.42
USP48-207ENST00000471752 ABHD5Q8WTS1 349 aa6.2□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms