RNA–Protein interactions for RNA: ENST00000471372.1

SMC5-202, Transcript of structural maintenance of chromosomes 5, humanhuman

TSL 3

Gene SMC5, Length 910 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-202ENST00000471372 FAM78BQ5VT40 261 aa3.74□□□□□ -1.81
SMC5-202ENST00000471372 SPOPLQ6IQ16 392 aa3.74□□□□□ -1.81
SMC5-202ENST00000471372 HIST2H3AQ71DI3 136 aa3.74□□□□□ -1.81
SMC5-202ENST00000471372 ZNF550Q7Z398 422 aa3.74□□□□□ -1.81
SMC5-202ENST00000471372 RPRMLQ8N4K4 120 aa3.74□□□□□ -1.81
SMC5-202ENST00000471372 TMEM86BQ8N661 226 aa3.74□□□□□ -1.81
SMC5-202ENST00000471372 ZFAND2AQ8N6M9 145 aa3.74□□□□□ -1.81
SMC5-202ENST00000471372 BPIFB6Q8NFQ5 453 aa3.74□□□□□ -1.81
SMC5-202ENST00000471372 JOSD2Q8TAC2 188 aa3.74□□□□□ -1.81
SMC5-202ENST00000471372 DIRAS2Q96HU8 199 aa3.74□□□□□ -1.81
SMC5-202ENST00000471372 SLC35G5Q96KT7 338 aa3.74□□□□□ -1.81
SMC5-202ENST00000471372 OR51I2Q9H344 312 aa3.74□□□□□ -1.81
SMC5-202ENST00000471372 CTNNBIP1Q9NSA3 81 aaPredicted RBP3.74□□□□□ -1.81
SMC5-202ENST00000471372 TAS2R1Q9NYW7 299 aa3.74□□□□□ -1.81
SMC5-202ENST00000471372 FIS1Q9Y3D6 152 aa3.74□□□□□ -1.81
SMC5-202ENST00000471372 KMT2EQ8IZD2 1858 aa3.73□□□□□ -1.81
SMC5-202ENST00000471372 KPNA3O00505 521 aaPredicted RBP3.73□□□□□ -1.81
SMC5-202ENST00000471372 DENRO43583 198 aaKnown RBP3.73□□□□□ -1.81
SMC5-202ENST00000471372 SLC25A20O43772 301 aa3.73□□□□□ -1.81
SMC5-202ENST00000471372 INAFM2P0DMQ5 153 aa3.73□□□□□ -1.81
SMC5-202ENST00000471372 CCL1P22362 96 aa3.73□□□□□ -1.81
SMC5-202ENST00000471372 OPRM1P35372 400 aa3.73□□□□□ -1.81
SMC5-202ENST00000471372 IDH3GP51553 393 aaPredicted RBP3.73□□□□□ -1.81
SMC5-202ENST00000471372 SRSF6Q13247 344 aaKnown RBP3.73□□□□□ -1.81
SMC5-202ENST00000471372 DHRS2Q13268 280 aa3.73□□□□□ -1.81
SMC5-202ENST00000471372 LGALSLQ3ZCW2 172 aaPredicted RBP3.73□□□□□ -1.81
SMC5-202ENST00000471372 SBSNQ6UWP8 590 aa3.73□□□□□ -1.81
SMC5-202ENST00000471372 LYZL2Q7Z4W2 148 aa3.73□□□□□ -1.81
SMC5-202ENST00000471372 BAP18Q8IXM2 172 aa3.73□□□□□ -1.81
SMC5-202ENST00000471372 ZNF680Q8NEM1 530 aa3.73□□□□□ -1.81
SMC5-202ENST00000471372 DGCR14Q96DF8 476 aaKnown RBP3.73□□□□□ -1.81
SMC5-202ENST00000471372 TMA16Q96EY4 203 aaKnown RBP3.73□□□□□ -1.81
SMC5-202ENST00000471372 IL20Q9NYY1 176 aa3.73□□□□□ -1.81
SMC5-202ENST00000471372 CLDN24A6NM45 220 aa3.72□□□□□ -1.81
SMC5-202ENST00000471372 UCHL3P15374 230 aa3.72□□□□□ -1.81
SMC5-202ENST00000471372 ALOX5APP20292 161 aa3.72□□□□□ -1.81
SMC5-202ENST00000471372 HSD11B1P28845 292 aa3.72□□□□□ -1.81
SMC5-202ENST00000471372 SPCS3P61009 180 aa3.72□□□□□ -1.81
SMC5-202ENST00000471372 IFITM2Q01629 132 aa3.72□□□□□ -1.81
SMC5-202ENST00000471372 KRTAP13-2Q52LG2 175 aa3.72□□□□□ -1.81
SMC5-202ENST00000471372 H1FOOQ8IZA3 346 aaPredicted RBP3.72□□□□□ -1.81
SMC5-202ENST00000471372 CLDN22Q8N7P3 220 aa3.72□□□□□ -1.81
SMC5-202ENST00000471372 CD200R1Q8TD46 325 aa3.72□□□□□ -1.81
SMC5-202ENST00000471372 TBX5Q99593 518 aa3.72□□□□□ -1.81
SMC5-202ENST00000471372 MARCOQ9UEW3 520 aaPredicted RBP3.72□□□□□ -1.81
SMC5-202ENST00000471372 CEP170Q5SW79 1584 aa3.72□□□□□ -1.81
SMC5-202ENST00000471372 KIF26AQ9ULI4 1882 aaPredicted RBP3.71□□□□□ -1.82
SMC5-202ENST00000471372 GSTZ1O43708 216 aaPredicted RBP3.71□□□□□ -1.82
SMC5-202ENST00000471372 KRT75O95678 551 aa3.71□□□□□ -1.82
SMC5-202ENST00000471372 MT-CO2P00403 227 aa3.71□□□□□ -1.82
SMC5-202ENST00000471372 ZNF14P17017 642 aaPredicted RBP3.71□□□□□ -1.82
SMC5-202ENST00000471372 S100A5P33763 92 aa3.71□□□□□ -1.82
SMC5-202ENST00000471372 FOXA1P55317 472 aa3.71□□□□□ -1.82
SMC5-202ENST00000471372 BIKQ13323 160 aa3.71□□□□□ -1.82
SMC5-202ENST00000471372 SLC9A3R2Q15599 337 aa3.71□□□□□ -1.82
SMC5-202ENST00000471372 KRTAP25-1Q3LHN0 102 aa3.71□□□□□ -1.82
SMC5-202ENST00000471372 DEDD2Q8WXF8 326 aa3.71□□□□□ -1.82
SMC5-202ENST00000471372 SLC35B4Q969S0 331 aa3.71□□□□□ -1.82
SMC5-202ENST00000471372 C1QTNF6Q9BXI9 259 aa3.71□□□□□ -1.82
SMC5-202ENST00000471372 VPS29Q9UBQ0 182 aa3.71□□□□□ -1.82
SMC5-202ENST00000471372 ZNF337Q9Y3M9 751 aa3.71□□□□□ -1.82
SMC5-202ENST00000471372 THSD7AQ9UPZ6 1657 aa3.71□□□□□ -1.82
SMC5-202ENST00000471372 HLA-DQB2P05538 268 aa3.7□□□□□ -1.82
SMC5-202ENST00000471372 CRABP1P29762 137 aa3.7□□□□□ -1.82
SMC5-202ENST00000471372 CAPZBP47756 277 aa3.7□□□□□ -1.82
SMC5-202ENST00000471372 MARCKSL1P49006 195 aa3.7□□□□□ -1.82
SMC5-202ENST00000471372 RPS11P62280 158 aaKnown RBP eCLIP3.7□□□□□ -1.82
SMC5-202ENST00000471372 MRPS25P82663 173 aaKnown RBP3.7□□□□□ -1.82
SMC5-202ENST00000471372 BATFQ16520 125 aa3.7□□□□□ -1.82
SMC5-202ENST00000471372 ZFAND6Q6FIF0 208 aa3.7□□□□□ -1.82
SMC5-202ENST00000471372 ALKAL1Q6UXT8 129 aa3.7□□□□□ -1.82
SMC5-202ENST00000471372 SCXQ7RTU7 201 aa3.7□□□□□ -1.82
SMC5-202ENST00000471372 C1orf64Q8NEQ6 169 aa3.7□□□□□ -1.82
SMC5-202ENST00000471372 OR2T4Q8NH00 348 aa3.7□□□□□ -1.82
SMC5-202ENST00000471372 OR2T27Q8NH04 317 aa3.7□□□□□ -1.82
SMC5-202ENST00000471372 MS4A6EQ96DS6 147 aa3.7□□□□□ -1.82
SMC5-202ENST00000471372 SLC25A44Q96H78 314 aaPredicted RBP3.7□□□□□ -1.82
SMC5-202ENST00000471372 FKBP14Q9NWM8 211 aa3.7□□□□□ -1.82
SMC5-202ENST00000471372 ANAPC10Q9UM13 185 aa3.7□□□□□ -1.82
SMC5-202ENST00000471372 SSH2Q76I76 1423 aa3.7□□□□□ -1.82
SMC5-202ENST00000471372 IGSF23A1L1A6 192 aa3.69□□□□□ -1.82
SMC5-202ENST00000471372 SMIM9A6NGZ8 99 aa3.69□□□□□ -1.82
SMC5-202ENST00000471372 C15orf65H3BRN8 121 aa3.69□□□□□ -1.82
SMC5-202ENST00000471372 CHP2O43745 196 aa3.69□□□□□ -1.82
SMC5-202ENST00000471372 CD7P09564 240 aa3.69□□□□□ -1.82
SMC5-202ENST00000471372 IL15RAQ13261 267 aa3.69□□□□□ -1.82
SMC5-202ENST00000471372 MRPL51Q4U2R6 128 aaKnown RBP3.69□□□□□ -1.82
SMC5-202ENST00000471372 SPIN3Q5JUX0 258 aa3.69□□□□□ -1.82
SMC5-202ENST00000471372 CALHM3Q86XJ0 350 aa3.69□□□□□ -1.82
SMC5-202ENST00000471372 DEFB125Q8N687 156 aa3.69□□□□□ -1.82
SMC5-202ENST00000471372 OR5B17Q8NGF7 314 aa3.69□□□□□ -1.82
SMC5-202ENST00000471372 OR1L8Q8NGR8 309 aa3.69□□□□□ -1.82
SMC5-202ENST00000471372 OR5P3Q8WZ94 311 aa3.69□□□□□ -1.82
SMC5-202ENST00000471372 PXMP4Q9Y6I8 212 aa3.69□□□□□ -1.82
SMC5-202ENST00000471372 R4GN34 69 aa3.69□□□□□ -1.82
SMC5-202ENST00000471372 FLT4P35916 1363 aa3.68□□□□□ -1.82
SMC5-202ENST00000471372 GGTLC3B5MD39 225 aa3.68□□□□□ -1.82
SMC5-202ENST00000471372 CRYGDP07320 174 aa3.68□□□□□ -1.82
SMC5-202ENST00000471372 OR4D2P58180 307 aa3.68□□□□□ -1.82
SMC5-202ENST00000471372 PMAIP1Q13794 54 aa3.68□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms