RNA–Protein interactions for RNA: ENST00000471350.1

COMMD3-209, Transcript of COMM domain containing 3, humanhuman

TSL 2

Gene COMMD3, Length 476 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-209ENST00000471350 MED28Q9H204 178 aa-0.19□□□□□ -2.44
COMMD3-209ENST00000471350 SYT4Q9H2B2 425 aa-0.19□□□□□ -2.44
COMMD3-209ENST00000471350 ANKHQ9HCJ1 492 aa-0.19□□□□□ -2.44
COMMD3-209ENST00000471350 SLC2A9Q9NRM0 540 aa-0.19□□□□□ -2.44
COMMD3-209ENST00000471350 DMAC2Q9NW81 257 aa-0.19□□□□□ -2.44
COMMD3-209ENST00000471350 LINC00527Q9UJ94 153 aa-0.19□□□□□ -2.44
COMMD3-209ENST00000471350 RHBDD3Q9Y3P4 386 aa-0.19□□□□□ -2.44
COMMD3-209ENST00000471350 ADAMTSL3P82987 1691 aa-0.19□□□□□ -2.44
COMMD3-209ENST00000471350 YLPM1P49750 1951 aaKnown RBP-0.19□□□□□ -2.44
COMMD3-209ENST00000471350 ATAD5Q96QE3 1844 aa-0.2□□□□□ -2.44
COMMD3-209ENST00000471350 BAZ2BQ9UIF8 2168 aaKnown RBP-0.2□□□□□ -2.44
COMMD3-209ENST00000471350 DMBT1Q9UGM3 2413 aaPredicted RBP-0.2□□□□□ -2.44
COMMD3-209ENST00000471350 IGHV1-18A0A0C4DH31 117 aa-0.2□□□□□ -2.44
COMMD3-209ENST00000471350 GOLGA6L10A6NI86 522 aa-0.2□□□□□ -2.44
COMMD3-209ENST00000471350 C8orf87E5RJ46 101 aa-0.2□□□□□ -2.44
COMMD3-209ENST00000471350 CREBL2O60519 120 aaPredicted RBP-0.2□□□□□ -2.44
COMMD3-209ENST00000471350 OR13C7P0DN81 318 aa-0.2□□□□□ -2.44
COMMD3-209ENST00000471350 BCAP31P51572 246 aa-0.2□□□□□ -2.44
COMMD3-209ENST00000471350 TSPAN5P62079 268 aa-0.2□□□□□ -2.44
COMMD3-209ENST00000471350 BEX3Q00994 111 aa-0.2□□□□□ -2.44
COMMD3-209ENST00000471350 RUNX1Q01196 453 aa-0.2□□□□□ -2.44
COMMD3-209ENST00000471350 CD164Q04900 197 aa-0.2□□□□□ -2.44
COMMD3-209ENST00000471350 HNRNPA1L2Q32P51 320 aaKnown RBP-0.2□□□□□ -2.44
COMMD3-209ENST00000471350 TRMT12Q53H54 448 aaKnown RBP-0.2□□□□□ -2.44
COMMD3-209ENST00000471350 ACTL10Q5JWF8 245 aa-0.2□□□□□ -2.44
COMMD3-209ENST00000471350 PDPK2PQ6A1A2 396 aa-0.2□□□□□ -2.44
COMMD3-209ENST00000471350 PID1Q7Z2X4 250 aa-0.2□□□□□ -2.44
COMMD3-209ENST00000471350 DOLPP1Q86YN1 238 aa-0.2□□□□□ -2.44
COMMD3-209ENST00000471350 PDCL2Q8N4E4 241 aa-0.2□□□□□ -2.44
COMMD3-209ENST00000471350 OR51L1Q8NGJ5 315 aa-0.2□□□□□ -2.44
COMMD3-209ENST00000471350 OR4C6Q8NH72 309 aa-0.2□□□□□ -2.44
COMMD3-209ENST00000471350 TSKUQ8WUA8 353 aa-0.2□□□□□ -2.44
COMMD3-209ENST00000471350 PATE1Q8WXA2 126 aa-0.2□□□□□ -2.44
COMMD3-209ENST00000471350 PGLYRP3Q96LB9 341 aa-0.2□□□□□ -2.44
COMMD3-209ENST00000471350 RGCCQ9H4X1 137 aa-0.2□□□□□ -2.44
COMMD3-209ENST00000471350 METTL8Q9H825 291 aaKnown RBP-0.2□□□□□ -2.44
COMMD3-209ENST00000471350 RPRD1BQ9NQG5 326 aaKnown RBP-0.2□□□□□ -2.44
COMMD3-209ENST00000471350 MS4A12Q9NXJ0 267 aa-0.2□□□□□ -2.44
COMMD3-209ENST00000471350 OR5AC2Q9NZP5 309 aa-0.2□□□□□ -2.44
COMMD3-209ENST00000471350 LAMA4Q16363 1823 aa-0.2□□□□□ -2.44
COMMD3-209ENST00000471350 KIAA2026Q5HYC2 2103 aa-0.2□□□□□ -2.44
COMMD3-209ENST00000471350 H7C2G1 150 aa-0.21□□□□□ -2.44
COMMD3-209ENST00000471350 ITGB1BP1O14713 200 aa-0.21□□□□□ -2.44
COMMD3-209ENST00000471350 ATP8B1O43520 1251 aa-0.21□□□□□ -2.44
COMMD3-209ENST00000471350 EPPINO95925 133 aa-0.21□□□□□ -2.44
COMMD3-209ENST00000471350 DEKP35659 375 aaKnown RBP-0.21□□□□□ -2.44
COMMD3-209ENST00000471350 RBM11P57052 281 aaKnown RBP-0.21□□□□□ -2.44
COMMD3-209ENST00000471350 TAS2R20P59543 309 aa-0.21□□□□□ -2.44
COMMD3-209ENST00000471350 TPI1P60174 286 aa-0.21□□□□□ -2.44
COMMD3-209ENST00000471350 AP1S1P61966 158 aa-0.21□□□□□ -2.44
COMMD3-209ENST00000471350 BTN3A2P78410 334 aa-0.21□□□□□ -2.44
COMMD3-209ENST00000471350 CAVIN4Q5BKX8 364 aa-0.21□□□□□ -2.44
COMMD3-209ENST00000471350 C9orf64Q5T6V5 341 aa-0.21□□□□□ -2.44
COMMD3-209ENST00000471350 PIP5KL1Q5T9C9 394 aa-0.21□□□□□ -2.44
COMMD3-209ENST00000471350 CLEC2AQ6UVW9 174 aa-0.21□□□□□ -2.44
COMMD3-209ENST00000471350 FAM19A1Q7Z5A9 133 aa-0.21□□□□□ -2.44
COMMD3-209ENST00000471350 RPS4Y2Q8TD47 263 aa-0.21□□□□□ -2.44
COMMD3-209ENST00000471350 OBSCN-AS1Q96MR7 158 aa-0.21□□□□□ -2.44
COMMD3-209ENST00000471350 MYCBPQ99417 103 aaPredicted RBP-0.21□□□□□ -2.44
COMMD3-209ENST00000471350 TMEM222Q9H0R3 208 aa-0.21□□□□□ -2.44
COMMD3-209ENST00000471350 NEURL4Q96JN8 1562 aa-0.21□□□□□ -2.44
COMMD3-209ENST00000471350 SYNRGQ9UMZ2 1314 aa-0.21□□□□□ -2.44
COMMD3-209ENST00000471350 COL7A1Q02388 2944 aa-0.21□□□□□ -2.44
COMMD3-209ENST00000471350 TRAV14DV4A0A0A6YYC5 116 aa-0.22□□□□□ -2.44
COMMD3-209ENST00000471350 TRAV38-1A0A0B4J264 116 aa-0.22□□□□□ -2.44
COMMD3-209ENST00000471350 A0A0D9SEW6 157 aa-0.22□□□□□ -2.44
COMMD3-209ENST00000471350 MEIS3P1A6NDR6 274 aa-0.22□□□□□ -2.44
COMMD3-209ENST00000471350 CLDN25C9JDP6 229 aa-0.22□□□□□ -2.44
COMMD3-209ENST00000471350 M0QYV0 167 aa-0.22□□□□□ -2.44
COMMD3-209ENST00000471350 FABP7O15540 132 aa-0.22□□□□□ -2.44
COMMD3-209ENST00000471350 AKR7A2O43488 359 aa-0.22□□□□□ -2.44
COMMD3-209ENST00000471350 GSTZ1O43708 216 aaPredicted RBP-0.22□□□□□ -2.44
COMMD3-209ENST00000471350 MPZL2O60487 215 aa-0.22□□□□□ -2.44
COMMD3-209ENST00000471350 IGLV3-27P01718 113 aa-0.22□□□□□ -2.44
COMMD3-209ENST00000471350 CRATP43155 626 aa-0.22□□□□□ -2.44
COMMD3-209ENST00000471350 GABRA2P47869 451 aa-0.22□□□□□ -2.44
COMMD3-209ENST00000471350 CLDN8P56748 225 aa-0.22□□□□□ -2.44
COMMD3-209ENST00000471350 GTF2BQ00403 316 aa-0.22□□□□□ -2.44
COMMD3-209ENST00000471350 STK38Q15208 465 aa-0.22□□□□□ -2.44
COMMD3-209ENST00000471350 MIAQ16674 131 aa-0.22□□□□□ -2.44
COMMD3-209ENST00000471350 FAHD1Q6P587 224 aa-0.22□□□□□ -2.44
COMMD3-209ENST00000471350 MTERF4Q7Z6M4 381 aaKnown RBP-0.22□□□□□ -2.44
COMMD3-209ENST00000471350 LINC00523Q86TU6 105 aa-0.22□□□□□ -2.44
COMMD3-209ENST00000471350 OR2AE1Q8NHA4 323 aa-0.22□□□□□ -2.44
COMMD3-209ENST00000471350 FAM45AQ8TCE6 357 aa-0.22□□□□□ -2.44
COMMD3-209ENST00000471350 AMELYQ99218 206 aa-0.22□□□□□ -2.44
COMMD3-209ENST00000471350 OR51E2Q9H255 320 aa-0.22□□□□□ -2.44
COMMD3-209ENST00000471350 TAS2R13Q9NYV9 303 aa-0.22□□□□□ -2.44
COMMD3-209ENST00000471350 GMEB1Q9Y692 573 aa-0.22□□□□□ -2.44
COMMD3-209ENST00000471350 MYOFQ9NZM1 2061 aa-0.22□□□□□ -2.44
COMMD3-209ENST00000471350 FRAS1Q86XX4 4008 aa-0.22□□□□□ -2.45
COMMD3-209ENST00000471350 MYO15BQ96JP2 1530 aa-0.23□□□□□ -2.45
COMMD3-209ENST00000471350 NCOA6Q14686 2063 aaPredicted RBP-0.23□□□□□ -2.45
COMMD3-209ENST00000471350 A0A0J9YW62 118 aa-0.23□□□□□ -2.45
COMMD3-209ENST00000471350 TRIM64CA6NLI5 447 aa-0.23□□□□□ -2.45
COMMD3-209ENST00000471350 SDCBPO00560 298 aaPredicted RBP-0.23□□□□□ -2.45
COMMD3-209ENST00000471350 CRXO43186 299 aaPredicted RBP-0.23□□□□□ -2.45
COMMD3-209ENST00000471350 TRGC1P0CF51 173 aa-0.23□□□□□ -2.45
COMMD3-209ENST00000471350 UBBP0CG47 229 aa-0.23□□□□□ -2.45
COMMD3-209ENST00000471350 RNASE3P12724 160 aaKnown RBP-0.23□□□□□ -2.45
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms