RNA–Protein interactions for RNA: ENST00000470338.1

TOP3B-215, Transcript of DNA topoisomerase III beta, humanhuman

TSL 5

Gene TOP3B, Length 624 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-215ENST00000470338 STPG2Q8N412 459 aa11.15□□□□□ -0.62
TOP3B-215ENST00000470338 ZNF436-AS1Q8NC38 126 aaPredicted RBP11.15□□□□□ -0.62
TOP3B-215ENST00000470338 OR4F17Q8NGA8 305 aa11.15□□□□□ -0.62
TOP3B-215ENST00000470338 OR4F4Q96R69 305 aa11.15□□□□□ -0.62
TOP3B-215ENST00000470338 HSPB9Q9BQS6 159 aa11.15□□□□□ -0.62
TOP3B-215ENST00000470338 LINC00527Q9UJ94 153 aa11.15□□□□□ -0.62
TOP3B-215ENST00000470338 ZNF221Q9UK13 617 aa11.15□□□□□ -0.62
TOP3B-215ENST00000470338 A0A0A6YYH2 397 aa11.14□□□□□ -0.63
TOP3B-215ENST00000470338 TMEM235A6NFC5 223 aa11.14□□□□□ -0.63
TOP3B-215ENST00000470338 A6NJ64 397 aa11.14□□□□□ -0.63
TOP3B-215ENST00000470338 H0YJW9 148 aa11.14□□□□□ -0.63
TOP3B-215ENST00000470338 NBR2O15453 112 aa11.14□□□□□ -0.63
TOP3B-215ENST00000470338 SSX5O60225 188 aa11.14□□□□□ -0.63
TOP3B-215ENST00000470338 NDUFA3O95167 84 aa11.14□□□□□ -0.63
TOP3B-215ENST00000470338 LSM3P62310 102 aaKnown RBP11.14□□□□□ -0.63
TOP3B-215ENST00000470338 GLDNQ6ZMI3 551 aaPredicted RBP11.14□□□□□ -0.63
TOP3B-215ENST00000470338 COMMD1Q8N668 190 aa11.14□□□□□ -0.63
TOP3B-215ENST00000470338 OR13F1Q8NGS4 319 aa11.14□□□□□ -0.63
TOP3B-215ENST00000470338 NUDCD2Q8WVJ2 157 aa11.14□□□□□ -0.63
TOP3B-215ENST00000470338 R3HDM4Q96D70 268 aa11.14□□□□□ -0.63
TOP3B-215ENST00000470338 RNF5Q99942 180 aa11.14□□□□□ -0.63
TOP3B-215ENST00000470338 ST6GALNAC5Q9BVH7 336 aa11.14□□□□□ -0.63
TOP3B-215ENST00000470338 FUNDC2Q9BWH2 189 aa11.14□□□□□ -0.63
TOP3B-215ENST00000470338 ZNF580Q9UK33 172 aa11.14□□□□□ -0.63
TOP3B-215ENST00000470338 RBBP9O75884 186 aa11.13□□□□□ -0.63
TOP3B-215ENST00000470338 HLA-DRB1P01911 266 aa11.13□□□□□ -0.63
TOP3B-215ENST00000470338 IGF1P05019 195 aa11.13□□□□□ -0.63
TOP3B-215ENST00000470338 OR8U9P0C7N5 309 aa11.13□□□□□ -0.63
TOP3B-215ENST00000470338 SMIM18P0DKX4 95 aa11.13□□□□□ -0.63
TOP3B-215ENST00000470338 GNG2P59768 71 aa11.13□□□□□ -0.63
TOP3B-215ENST00000470338 SLC35B1P78383 322 aa11.13□□□□□ -0.63
TOP3B-215ENST00000470338 C5orf64Q2M2E5 130 aa11.13□□□□□ -0.63
TOP3B-215ENST00000470338 H1FOOQ8IZA3 346 aaPredicted RBP11.13□□□□□ -0.63
TOP3B-215ENST00000470338 ZNF383Q8NA42 475 aa11.13□□□□□ -0.63
TOP3B-215ENST00000470338 DRAXINQ8NBI3 349 aaPredicted RBP11.13□□□□□ -0.63
TOP3B-215ENST00000470338 OR8U1Q8NH10 309 aa11.13□□□□□ -0.63
TOP3B-215ENST00000470338 GON7Q9BXV9 100 aa11.13□□□□□ -0.63
TOP3B-215ENST00000470338 WASHC3Q9Y3C0 194 aa11.13□□□□□ -0.63
TOP3B-215ENST00000470338 NOTCH3Q9UM47 2321 aa11.13□□□□□ -0.63
TOP3B-215ENST00000470338 TRAV18A0A075B6X5 111 aa11.12□□□□□ -0.63
TOP3B-215ENST00000470338 A0A1W2PRX2 142 aa11.12□□□□□ -0.63
TOP3B-215ENST00000470338 TFAP2AP05549 437 aa11.12□□□□□ -0.63
TOP3B-215ENST00000470338 CTXN2P0C2S0 81 aa11.12□□□□□ -0.63
TOP3B-215ENST00000470338 LINC00205P59089 165 aa11.12□□□□□ -0.63
TOP3B-215ENST00000470338 CNIH2Q6PI25 160 aa11.12□□□□□ -0.63
TOP3B-215ENST00000470338 SLC25A46Q96AG3 418 aa11.12□□□□□ -0.63
TOP3B-215ENST00000470338 GINS4Q9BRT9 223 aa11.12□□□□□ -0.63
TOP3B-215ENST00000470338 OR2D2Q9H210 308 aa11.12□□□□□ -0.63
TOP3B-215ENST00000470338 DIABLOQ9NR28 239 aa11.12□□□□□ -0.63
TOP3B-215ENST00000470338 SDHAF2Q9NX18 166 aa11.12□□□□□ -0.63
TOP3B-215ENST00000470338 KIAA1456Q9P272 454 aa11.12□□□□□ -0.63
TOP3B-215ENST00000470338 ZNF107Q9UII5 783 aaPredicted RBP11.12□□□□□ -0.63
TOP3B-215ENST00000470338 H7C2Y5 167 aa11.11□□□□□ -0.63
TOP3B-215ENST00000470338 M0R1X1 148 aa11.11□□□□□ -0.63
TOP3B-215ENST00000470338 RRHO14718 337 aa11.11□□□□□ -0.63
TOP3B-215ENST00000470338 NCS1P62166 190 aa11.11□□□□□ -0.63
TOP3B-215ENST00000470338 RPL23AP62750 156 aaKnown RBP11.11□□□□□ -0.63
TOP3B-215ENST00000470338 CFHR3Q02985 330 aa11.11□□□□□ -0.63
TOP3B-215ENST00000470338 LIN54Q6MZP7 749 aa11.11□□□□□ -0.63
TOP3B-215ENST00000470338 TEX38Q6PEX7 206 aa11.11□□□□□ -0.63
TOP3B-215ENST00000470338 WFDC9Q8NEX5 89 aa11.11□□□□□ -0.63
TOP3B-215ENST00000470338 C5orf30Q96GV9 206 aa11.11□□□□□ -0.63
TOP3B-215ENST00000470338 OR51J1Q9H342 316 aa11.11□□□□□ -0.63
TOP3B-215ENST00000470338 AUNIPQ9H7T9 357 aa11.11□□□□□ -0.63
TOP3B-215ENST00000470338 ZFP57Q9NU63 452 aa11.11□□□□□ -0.63
TOP3B-215ENST00000470338 ANXA10Q9UJ72 324 aa11.11□□□□□ -0.63
TOP3B-215ENST00000470338 IGHV7-81A0A0B4J1V7 117 aa11.1□□□□□ -0.63
TOP3B-215ENST00000470338 XRCC3O43542 346 aa11.1□□□□□ -0.63
TOP3B-215ENST00000470338 IGKV1-16P04430 117 aa11.1□□□□□ -0.63
TOP3B-215ENST00000470338 VBP1P61758 197 aa11.1□□□□□ -0.63
TOP3B-215ENST00000470338 DEFA6Q01524 100 aa11.1□□□□□ -0.63
TOP3B-215ENST00000470338 UBE2NLQ5JXB2 153 aa11.1□□□□□ -0.63
TOP3B-215ENST00000470338 ANKRD13BQ86YJ7 626 aa11.1□□□□□ -0.63
TOP3B-215ENST00000470338 PDPNQ86YL7 162 aa11.1□□□□□ -0.63
TOP3B-215ENST00000470338 RNF152Q8N8N0 203 aa11.1□□□□□ -0.63
TOP3B-215ENST00000470338 KCTD12Q96CX2 325 aaKnown RBP11.1□□□□□ -0.63
TOP3B-215ENST00000470338 S100A16Q96FQ6 103 aaKnown RBP11.1□□□□□ -0.63
TOP3B-215ENST00000470338 FBXL15Q9H469 300 aa11.1□□□□□ -0.63
TOP3B-215ENST00000470338 IGHG4P01861 327 aa11.09□□□□□ -0.63
TOP3B-215ENST00000470338 HLA-DQB1P01920 261 aa11.09□□□□□ -0.63
TOP3B-215ENST00000470338 APOA2P02652 100 aa11.09□□□□□ -0.63
TOP3B-215ENST00000470338 ELANEP08246 267 aa11.09□□□□□ -0.63
TOP3B-215ENST00000470338 OR5H8P0DN80 308 aa11.09□□□□□ -0.63
TOP3B-215ENST00000470338 PF4V1P10720 104 aa11.09□□□□□ -0.63
TOP3B-215ENST00000470338 VDAC1P21796 283 aa11.09□□□□□ -0.63
TOP3B-215ENST00000470338 SLC6A1P30531 599 aa11.09□□□□□ -0.63
TOP3B-215ENST00000470338 TAGLNQ01995 201 aaKnown RBP11.09□□□□□ -0.63
TOP3B-215ENST00000470338 FOXE3Q13461 319 aa11.09□□□□□ -0.63
TOP3B-215ENST00000470338 PSG5Q15238 335 aa11.09□□□□□ -0.63
TOP3B-215ENST00000470338 KHDC1LQ5JSQ8 128 aa11.09□□□□□ -0.63
TOP3B-215ENST00000470338 SAMD5Q5TGI4 173 aa11.09□□□□□ -0.63
TOP3B-215ENST00000470338 ZNF660Q6AZW8 331 aaPredicted RBP11.09□□□□□ -0.63
TOP3B-215ENST00000470338 HOGA1Q86XE5 327 aa11.09□□□□□ -0.63
TOP3B-215ENST00000470338 BEST4Q8NFU0 473 aa11.09□□□□□ -0.63
TOP3B-215ENST00000470338 MRPS26Q9BYN8 205 aaKnown RBP11.09□□□□□ -0.63
TOP3B-215ENST00000470338 SLC35D1Q9NTN3 355 aa11.09□□□□□ -0.63
TOP3B-215ENST00000470338 OR2W1Q9Y3N9 320 aa11.09□□□□□ -0.63
TOP3B-215ENST00000470338 RBM7Q9Y580 266 aaKnown RBP11.09□□□□□ -0.63
TOP3B-215ENST00000470338 FCN1O00602 326 aa11.08□□□□□ -0.64
TOP3B-215ENST00000470338 ATP6V0E1O15342 81 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 166.4 ms