RNA–Protein interactions for RNA: ENST00000469713.1

VPS8-220, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 3

Gene VPS8, Length 668 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-220ENST00000469713 TP53TG1Q9Y2A0 90 aa1.6□□□□□ -2.15
VPS8-220ENST00000469713 PUS1Q9Y606 427 aaKnown RBP eCLIP1.6□□□□□ -2.15
VPS8-220ENST00000469713 MPDZO75970 2070 aa1.59□□□□□ -2.15
VPS8-220ENST00000469713 MUC21A0A0G2JKD1 596 aa1.59□□□□□ -2.15
VPS8-220ENST00000469713 MUC21A0A140T8X8 626 aa1.59□□□□□ -2.15
VPS8-220ENST00000469713 A0A1W2PQL4 384 aaPredicted RBP1.59□□□□□ -2.15
VPS8-220ENST00000469713 LY6LH3BQJ8 138 aa1.59□□□□□ -2.15
VPS8-220ENST00000469713 COPEO14579 308 aa1.59□□□□□ -2.15
VPS8-220ENST00000469713 ATP8B1O43520 1251 aa1.59□□□□□ -2.15
VPS8-220ENST00000469713 IGKV1-16P04430 117 aa1.59□□□□□ -2.15
VPS8-220ENST00000469713 ATP5G1P05496 136 aa1.59□□□□□ -2.15
VPS8-220ENST00000469713 CRYBA1P05813 215 aa1.59□□□□□ -2.15
VPS8-220ENST00000469713 LINC00614P0C842 121 aa1.59□□□□□ -2.15
VPS8-220ENST00000469713 CXCL2P19875 107 aa1.59□□□□□ -2.15
VPS8-220ENST00000469713 NPPCP23582 126 aa1.59□□□□□ -2.15
VPS8-220ENST00000469713 ATP6V0CP27449 155 aa1.59□□□□□ -2.15
VPS8-220ENST00000469713 HPCAP84074 193 aa1.59□□□□□ -2.15
VPS8-220ENST00000469713 HSP90B2PQ58FF3 399 aa1.59□□□□□ -2.15
VPS8-220ENST00000469713 MNS1Q8NEH6 495 aa1.59□□□□□ -2.15
VPS8-220ENST00000469713 OR10D3Q8NH80 312 aa1.59□□□□□ -2.15
VPS8-220ENST00000469713 RNASE11Q8TAA1 199 aaKnown RBP1.59□□□□□ -2.15
VPS8-220ENST00000469713 FNDC9Q8TBE3 224 aa1.59□□□□□ -2.15
VPS8-220ENST00000469713 ZNF426Q9BUY5 554 aa1.59□□□□□ -2.15
VPS8-220ENST00000469713 MND1Q9BWT6 205 aa1.59□□□□□ -2.15
VPS8-220ENST00000469713 RAD50Q92878 1312 aa1.59□□□□□ -2.16
VPS8-220ENST00000469713 PLCH2O75038 1416 aa1.58□□□□□ -2.16
VPS8-220ENST00000469713 COL5A3P25940 1745 aaPredicted RBP1.58□□□□□ -2.16
VPS8-220ENST00000469713 OCMP0CE72 109 aaPredicted RBP1.58□□□□□ -2.16
VPS8-220ENST00000469713 GZMBP10144 247 aa1.58□□□□□ -2.16
VPS8-220ENST00000469713 CCL3P10147 92 aa1.58□□□□□ -2.16
VPS8-220ENST00000469713 CD36P16671 472 aa1.58□□□□□ -2.16
VPS8-220ENST00000469713 CXCL3P19876 107 aa1.58□□□□□ -2.16
VPS8-220ENST00000469713 CRHBPP24387 322 aa1.58□□□□□ -2.16
VPS8-220ENST00000469713 CRYBB3P26998 211 aa1.58□□□□□ -2.16
VPS8-220ENST00000469713 MIPP30301 263 aa1.58□□□□□ -2.16
VPS8-220ENST00000469713 OR10J1P30954 320 aa1.58□□□□□ -2.16
VPS8-220ENST00000469713 ANP32AP39687 249 aaKnown RBP1.58□□□□□ -2.16
VPS8-220ENST00000469713 CA7P43166 264 aa1.58□□□□□ -2.16
VPS8-220ENST00000469713 SERPINB10P48595 397 aa1.58□□□□□ -2.16
VPS8-220ENST00000469713 TMEM31Q5JXX7 168 aa1.58□□□□□ -2.16
VPS8-220ENST00000469713 DNM1P34Q6PK57 102 aa1.58□□□□□ -2.16
VPS8-220ENST00000469713 DRAM2Q6UX65 266 aa1.58□□□□□ -2.16
VPS8-220ENST00000469713 FAM9CQ8IZT9 166 aa1.58□□□□□ -2.16
VPS8-220ENST00000469713 SLC37A2Q8TED4 501 aa1.58□□□□□ -2.16
VPS8-220ENST00000469713 DNAJB3Q8WWF6 145 aa1.58□□□□□ -2.16
VPS8-220ENST00000469713 CXCL16Q9H2A7 254 aa1.58□□□□□ -2.16
VPS8-220ENST00000469713 MS4A6AQ9H2W1 248 aa1.58□□□□□ -2.16
VPS8-220ENST00000469713 UBAP1Q9NZ09 502 aa1.58□□□□□ -2.16
VPS8-220ENST00000469713 HDGFL3Q9Y3E1 203 aa1.58□□□□□ -2.16
VPS8-220ENST00000469713 ARHGAP32A7KAX9 2087 aa1.58□□□□□ -2.16
VPS8-220ENST00000469713 RIMS2Q9UQ26 1411 aa1.57□□□□□ -2.16
VPS8-220ENST00000469713 COL11A1P12107 1806 aaPredicted RBP1.57□□□□□ -2.16
VPS8-220ENST00000469713 PLXNA3P51805 1871 aa1.57□□□□□ -2.16
VPS8-220ENST00000469713 TINCRA0A1B0GVN0 87 aa1.57□□□□□ -2.16
VPS8-220ENST00000469713 H3BPC8 53 aa1.57□□□□□ -2.16
VPS8-220ENST00000469713 SLC17A3O00476 420 aa1.57□□□□□ -2.16
VPS8-220ENST00000469713 UBFD1O14562 309 aaKnown RBP1.57□□□□□ -2.16
VPS8-220ENST00000469713 ITGB1BP1O14713 200 aa1.57□□□□□ -2.16
VPS8-220ENST00000469713 GSTZ1O43708 216 aaPredicted RBP1.57□□□□□ -2.16
VPS8-220ENST00000469713 STX10O60499 249 aa1.57□□□□□ -2.16
VPS8-220ENST00000469713 HPGDSO60760 199 aa1.57□□□□□ -2.16
VPS8-220ENST00000469713 S1PR2O95136 353 aa1.57□□□□□ -2.16
VPS8-220ENST00000469713 CDK9P50750 372 aaKnown RBP1.57□□□□□ -2.16
VPS8-220ENST00000469713 TAS2R45P59539 299 aa1.57□□□□□ -2.16
VPS8-220ENST00000469713 COTL1Q14019 142 aa1.57□□□□□ -2.16
VPS8-220ENST00000469713 KRTAP21-2Q3LI59 83 aa1.57□□□□□ -2.16
VPS8-220ENST00000469713 C2orf91Q6ZV80 131 aa1.57□□□□□ -2.16
VPS8-220ENST00000469713 C1orf174Q8IYL3 243 aa1.57□□□□□ -2.16
VPS8-220ENST00000469713 Q8WTZ3 238 aa1.57□□□□□ -2.16
VPS8-220ENST00000469713 OR52B2Q96RD2 323 aa1.57□□□□□ -2.16
VPS8-220ENST00000469713 PECRQ9BY49 303 aa1.57□□□□□ -2.16
VPS8-220ENST00000469713 SLC22A4Q9H015 551 aa1.57□□□□□ -2.16
VPS8-220ENST00000469713 NSRP1Q9H0G5 558 aaKnown RBP1.57□□□□□ -2.16
VPS8-220ENST00000469713 IMP3Q9NV31 184 aaKnown RBP1.57□□□□□ -2.16
VPS8-220ENST00000469713 ATP6V1DQ9Y5K8 247 aa1.57□□□□□ -2.16
VPS8-220ENST00000469713 DSCAMO60469 2012 aa1.57□□□□□ -2.16
VPS8-220ENST00000469713 COL4A2P08572 1712 aa1.57□□□□□ -2.16
VPS8-220ENST00000469713 CACNA1AO00555 2505 aa1.57□□□□□ -2.16
VPS8-220ENST00000469713 PKD1L2Q7Z442 2459 aa1.56□□□□□ -2.16
VPS8-220ENST00000469713 TRAV8-1A0A0A6YYK1 113 aa1.56□□□□□ -2.16
VPS8-220ENST00000469713 MDFIC2A0A1B0GVS7 189 aa1.56□□□□□ -2.16
VPS8-220ENST00000469713 GRIFINA4D1Z8 144 aa1.56□□□□□ -2.16
VPS8-220ENST00000469713 C11orf86A6NJI1 115 aa1.56□□□□□ -2.16
VPS8-220ENST00000469713 H3BRN7 92 aa1.56□□□□□ -2.16
VPS8-220ENST00000469713 COCHO43405 550 aa1.56□□□□□ -2.16
VPS8-220ENST00000469713 PSMG1O95456 288 aa1.56□□□□□ -2.16
VPS8-220ENST00000469713 HIST1H1CP16403 213 aaKnown RBP1.56□□□□□ -2.16
VPS8-220ENST00000469713 ALOX5APP20292 161 aa1.56□□□□□ -2.16
VPS8-220ENST00000469713 EMP2P54851 167 aa1.56□□□□□ -2.16
VPS8-220ENST00000469713 KRTAP13-4Q3LI77 160 aa1.56□□□□□ -2.16
VPS8-220ENST00000469713 AMTNQ6UX39 209 aa1.56□□□□□ -2.16
VPS8-220ENST00000469713 FGF13Q92913 245 aa1.56□□□□□ -2.16
VPS8-220ENST00000469713 TMBIM1Q969X1 311 aa1.56□□□□□ -2.16
VPS8-220ENST00000469713 NKX6-2Q9C056 277 aaPredicted RBP1.56□□□□□ -2.16
VPS8-220ENST00000469713 SLC2A9Q9NRM0 540 aa1.56□□□□□ -2.16
VPS8-220ENST00000469713 PSMD13Q9UNM6 376 aa1.56□□□□□ -2.16
VPS8-220ENST00000469713 A0A0G2JQZ4 141 aa1.55□□□□□ -2.16
VPS8-220ENST00000469713 OR5K4A6NMS3 321 aa1.55□□□□□ -2.16
VPS8-220ENST00000469713 OR11H12B2RN74 326 aa1.55□□□□□ -2.16
VPS8-220ENST00000469713 M0R381 172 aa1.55□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms