RNA–Protein interactions for RNA: ENST00000469543.5

VIM-203, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 2,666 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-203ENST00000469543 TCTEX1D2Q8WW35 142 aa15.95■□□□□ 0.14
VIM-203ENST00000469543 KIAA1456Q9P272 454 aa15.95■□□□□ 0.14
VIM-203ENST00000469543 UBE2L5PA0A1B0GUS4 154 aa15.95■□□□□ 0.14
VIM-203ENST00000469543 TM4SF5O14894 197 aa15.95■□□□□ 0.14
VIM-203ENST00000469543 SLC25A6P12236 298 aa15.95■□□□□ 0.14
VIM-203ENST00000469543 CD82P27701 267 aa15.95■□□□□ 0.14
VIM-203ENST00000469543 ZNF718Q3SXZ3 478 aa15.95■□□□□ 0.14
VIM-203ENST00000469543 LFNGQ8NES3 379 aa15.95■□□□□ 0.14
VIM-203ENST00000469543 ODAMA1E959 279 aa15.94■□□□□ 0.14
VIM-203ENST00000469543 OOEPA6NGQ2 149 aa15.94■□□□□ 0.14
VIM-203ENST00000469543 PROP1O75360 226 aa15.94■□□□□ 0.14
VIM-203ENST00000469543 CEACAM1P13688 526 aa15.94■□□□□ 0.14
VIM-203ENST00000469543 RPS23P62266 143 aaKnown RBP15.94■□□□□ 0.14
VIM-203ENST00000469543 SCGB1C1Q8TD33 95 aa15.94■□□□□ 0.14
VIM-203ENST00000469543 NINJ1Q92982 152 aa15.94■□□□□ 0.14
VIM-203ENST00000469543 RAB39BQ96DA2 213 aa15.94■□□□□ 0.14
VIM-203ENST00000469543 PROCRQ9UNN8 238 aa15.94■□□□□ 0.14
VIM-203ENST00000469543 MMP24Q9Y5R2 645 aa15.94■□□□□ 0.14
VIM-203ENST00000469543 POLEQ07864 2286 aa15.94■□□□□ 0.14
VIM-203ENST00000469543 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP15.94■□□□□ 0.14
VIM-203ENST00000469543 ZG16O60844 167 aa15.94■□□□□ 0.14
VIM-203ENST00000469543 RBMXL2O75526 392 aaKnown RBP15.94■□□□□ 0.14
VIM-203ENST00000469543 SELLP14151 372 aa15.94■□□□□ 0.14
VIM-203ENST00000469543 TNFRSF9Q07011 255 aa15.94■□□□□ 0.14
VIM-203ENST00000469543 Q3ZCU0 254 aa15.94■□□□□ 0.14
VIM-203ENST00000469543 FIP1L1Q6UN15 594 aaKnown RBP15.94■□□□□ 0.14
VIM-203ENST00000469543 ZGRF1Q86YA3 2104 aa15.93■□□□□ 0.14
VIM-203ENST00000469543 DFFBO76075 338 aa15.93■□□□□ 0.14
VIM-203ENST00000469543 TLE4Q04727 773 aa15.93■□□□□ 0.14
VIM-203ENST00000469543 SLC35E4Q6ICL7 350 aa15.93■□□□□ 0.14
VIM-203ENST00000469543 ZNF474Q6S9Z5 364 aaPredicted RBP15.93■□□□□ 0.14
VIM-203ENST00000469543 BHLHA15Q7RTS1 189 aaPredicted RBP15.93■□□□□ 0.14
VIM-203ENST00000469543 VKORC1L1Q8N0U8 176 aa15.93■□□□□ 0.14
VIM-203ENST00000469543 LEAP2Q969E1 77 aa15.93■□□□□ 0.14
VIM-203ENST00000469543 S100PBPQ96BU1 408 aa15.93■□□□□ 0.14
VIM-203ENST00000469543 EGLN1Q9GZT9 426 aa15.93■□□□□ 0.14
VIM-203ENST00000469543 BIN3Q9NQY0 253 aa15.93■□□□□ 0.14
VIM-203ENST00000469543 LRBAP50851 2863 aa15.93■□□□□ 0.14
VIM-203ENST00000469543 M0R1B8 84 aa15.93■□□□□ 0.14
VIM-203ENST00000469543 IGKV1D-33P01593 117 aa15.93■□□□□ 0.14
VIM-203ENST00000469543 IGKV1-33P01594 117 aa15.93■□□□□ 0.14
VIM-203ENST00000469543 IGLV1-44P01699 117 aa15.93■□□□□ 0.14
VIM-203ENST00000469543 PTAFRP25105 342 aa15.93■□□□□ 0.14
VIM-203ENST00000469543 SSX9Q7RTT3 188 aa15.93■□□□□ 0.14
VIM-203ENST00000469543 ZNF429Q86V71 674 aa15.93■□□□□ 0.14
VIM-203ENST00000469543 AGMATQ9BSE5 352 aa15.93■□□□□ 0.14
VIM-203ENST00000469543 DSCAMO60469 2012 aa15.93■□□□□ 0.14
VIM-203ENST00000469543 IGKV1D-17A0A075B6S4 117 aa15.92■□□□□ 0.14
VIM-203ENST00000469543 PRDX2P32119 198 aa15.92■□□□□ 0.14
VIM-203ENST00000469543 KLF2Q9Y5W3 355 aaPredicted RBP15.92■□□□□ 0.14
VIM-203ENST00000469543 PTPRBP23467 1997 aa15.92■□□□□ 0.14
VIM-203ENST00000469543 ZZEF1O43149 2961 aa15.92■□□□□ 0.14
VIM-203ENST00000469543 MT-ND4LP03901 98 aa15.92■□□□□ 0.14
VIM-203ENST00000469543 RAB5AP20339 215 aa15.92■□□□□ 0.14
VIM-203ENST00000469543 KITLGP21583 273 aa15.92■□□□□ 0.14
VIM-203ENST00000469543 EIF4EBP1Q13541 118 aaPredicted RBP15.92■□□□□ 0.14
VIM-203ENST00000469543 RBMS3Q6XE24 437 aaKnown RBP15.92■□□□□ 0.14
VIM-203ENST00000469543 SPRY3O43610 288 aa15.91■□□□□ 0.14
VIM-203ENST00000469543 RAB11AP62491 216 aa15.91■□□□□ 0.14
VIM-203ENST00000469543 DLK1P80370 383 aa15.91■□□□□ 0.14
VIM-203ENST00000469543 LRRC75BQ2VPJ9 315 aa15.91■□□□□ 0.14
VIM-203ENST00000469543 NCR3LG1Q68D85 454 aa15.91■□□□□ 0.14
VIM-203ENST00000469543 DUX4L9Q6RFH8 374 aaPredicted RBP15.91■□□□□ 0.14
VIM-203ENST00000469543 RCC1LQ96I51 464 aaKnown RBP15.91■□□□□ 0.14
VIM-203ENST00000469543 C12orf57Q99622 126 aa15.91■□□□□ 0.14
VIM-203ENST00000469543 TMPRSS5Q9H3S3 457 aa15.91■□□□□ 0.14
VIM-203ENST00000469543 SLC25A15Q9Y619 301 aa15.91■□□□□ 0.14
VIM-203ENST00000469543 OR2C1O95371 312 aa15.91■□□□□ 0.14
VIM-203ENST00000469543 TAGLN2P37802 199 aaKnown RBP15.91■□□□□ 0.14
VIM-203ENST00000469543 ZNF134P52741 427 aa15.91■□□□□ 0.14
VIM-203ENST00000469543 FAM215AQ9Y5M1 114 aa15.91■□□□□ 0.14
VIM-203ENST00000469543 HCFC1P51610 2035 aa15.91■□□□□ 0.14
VIM-203ENST00000469543 A0A1B0GW64 132 aa15.91■□□□□ 0.14
VIM-203ENST00000469543 ZNF98A6NK75 572 aa15.91■□□□□ 0.14
VIM-203ENST00000469543 SLC38A11Q08AI6 406 aa15.91■□□□□ 0.14
VIM-203ENST00000469543 WDR61Q9GZS3 305 aaKnown RBP15.91■□□□□ 0.14
VIM-203ENST00000469543 SVEP1Q4LDE5 3571 aa15.9■□□□□ 0.14
VIM-203ENST00000469543 ARFGEF3Q5TH69 2177 aa15.9■□□□□ 0.14
VIM-203ENST00000469543 LRRC30A6NM36 301 aa15.9■□□□□ 0.14
VIM-203ENST00000469543 AHRRA9YTQ3 701 aa15.9■□□□□ 0.14
VIM-203ENST00000469543 C1orf196B1AJZ1 125 aa15.9■□□□□ 0.14
VIM-203ENST00000469543 WNT2P09544 360 aa15.9■□□□□ 0.14
VIM-203ENST00000469543 RAB2AP61019 212 aa15.9■□□□□ 0.14
VIM-203ENST00000469543 SMIM21Q3B7S5 101 aa15.9■□□□□ 0.14
VIM-203ENST00000469543 C1orf229Q6ZS94 237 aaPredicted RBP15.9■□□□□ 0.14
VIM-203ENST00000469543 TGIF2LYQ8IUE0 185 aa15.9■□□□□ 0.14
VIM-203ENST00000469543 RPP25LQ8N5L8 163 aaKnown RBP15.9■□□□□ 0.14
VIM-203ENST00000469543 GCSAMQ8N6F7 178 aa15.9■□□□□ 0.14
VIM-203ENST00000469543 OR2V2Q96R30 315 aa15.9■□□□□ 0.14
VIM-203ENST00000469543 COA4Q9NYJ1 87 aa15.9■□□□□ 0.14
VIM-203ENST00000469543 NBASA2RRP1 2371 aa15.9■□□□□ 0.14
VIM-203ENST00000469543 C15orf65H3BRN8 121 aa15.9■□□□□ 0.14
VIM-203ENST00000469543 COL8A2P25067 703 aa15.9■□□□□ 0.14
VIM-203ENST00000469543 HOXA1P49639 335 aaPredicted RBP15.9■□□□□ 0.14
VIM-203ENST00000469543 EDDM3BP56851 147 aa15.9■□□□□ 0.14
VIM-203ENST00000469543 RAB5BP61020 215 aa15.9■□□□□ 0.14
VIM-203ENST00000469543 EIF2S3LQ2VIR3 472 aaKnown RBP15.9■□□□□ 0.14
VIM-203ENST00000469543 RPL39P5Q59GN2 51 aa15.9■□□□□ 0.14
VIM-203ENST00000469543 ZNF787Q6DD87 383 aa15.9■□□□□ 0.14
VIM-203ENST00000469543 MOGAT3Q86VF5 341 aa15.9■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms