RNA–Protein interactions for RNA: ENST00000469511.1

PTPN4-209, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 476 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-209ENST00000469511 KIR2DS2P43631 304 aa3.88□□□□□ -1.79
PTPN4-209ENST00000469511 RIPK1Q13546 671 aa3.88□□□□□ -1.79
PTPN4-209ENST00000469511 GK3PQ14409 553 aa3.88□□□□□ -1.79
PTPN4-209ENST00000469511 KISS1Q15726 138 aa3.88□□□□□ -1.79
PTPN4-209ENST00000469511 RPL39P5Q59GN2 51 aa3.88□□□□□ -1.79
PTPN4-209ENST00000469511 SYT6Q5T7P8 510 aaPredicted RBP3.88□□□□□ -1.79
PTPN4-209ENST00000469511 LCE4AQ5TA78 99 aa3.88□□□□□ -1.79
PTPN4-209ENST00000469511 ZNF691Q5VV52 312 aa3.88□□□□□ -1.79
PTPN4-209ENST00000469511 ELP2Q6IA86 826 aa3.88□□□□□ -1.79
PTPN4-209ENST00000469511 ZNF343Q6P1L6 599 aa3.88□□□□□ -1.79
PTPN4-209ENST00000469511 FAHD1Q6P587 224 aa3.88□□□□□ -1.79
PTPN4-209ENST00000469511 SAXO1Q8IYX7 474 aa3.88□□□□□ -1.79
PTPN4-209ENST00000469511 TMEM61Q8N0U2 210 aa3.88□□□□□ -1.79
PTPN4-209ENST00000469511 GVQW1Q8N7I0 195 aa3.88□□□□□ -1.79
PTPN4-209ENST00000469511 POC5Q8NA72 575 aa3.88□□□□□ -1.79
PTPN4-209ENST00000469511 OR2G2Q8NGZ5 317 aa3.88□□□□□ -1.79
PTPN4-209ENST00000469511 GRPEL2Q8TAA5 225 aa3.88□□□□□ -1.79
PTPN4-209ENST00000469511 SPSB1Q96BD6 273 aa3.88□□□□□ -1.79
PTPN4-209ENST00000469511 C10orf35Q96D05 121 aa3.88□□□□□ -1.79
PTPN4-209ENST00000469511 IL4I1Q96RQ9 567 aa3.88□□□□□ -1.79
PTPN4-209ENST00000469511 CST11Q9H112 138 aa3.88□□□□□ -1.79
PTPN4-209ENST00000469511 SLA2Q9H6Q3 261 aa3.88□□□□□ -1.79
PTPN4-209ENST00000469511 ZC4H2Q9NQZ6 224 aa3.88□□□□□ -1.79
PTPN4-209ENST00000469511 KRT84Q9NSB2 600 aa3.88□□□□□ -1.79
PTPN4-209ENST00000469511 CHCHD3Q9NX63 227 aaKnown RBP3.88□□□□□ -1.79
PTPN4-209ENST00000469511 UBQLN2Q9UHD9 624 aa3.88□□□□□ -1.79
PTPN4-209ENST00000469511 ST3GAL6Q9Y274 331 aa3.88□□□□□ -1.79
PTPN4-209ENST00000469511 FLG2Q5D862 2391 aaPredicted RBP3.88□□□□□ -1.79
PTPN4-209ENST00000469511 TMEM30CPA0ZSE6 113 aa3.87□□□□□ -1.79
PTPN4-209ENST00000469511 C2orf70A6NJV1 201 aa3.87□□□□□ -1.79
PTPN4-209ENST00000469511 OR4C45A6NMZ5 311 aa3.87□□□□□ -1.79
PTPN4-209ENST00000469511 IGLL5B9A064 214 aa3.87□□□□□ -1.79
PTPN4-209ENST00000469511 AIPO00170 330 aa3.87□□□□□ -1.79
PTPN4-209ENST00000469511 NDUFAB1O14561 156 aa3.87□□□□□ -1.79
PTPN4-209ENST00000469511 TXNL1O43396 289 aa3.87□□□□□ -1.79
PTPN4-209ENST00000469511 OR7C1O76099 320 aaPredicted RBP3.87□□□□□ -1.79
PTPN4-209ENST00000469511 NDUFB8O95169 186 aa3.87□□□□□ -1.79
PTPN4-209ENST00000469511 FADS2O95864 444 aaKnown RBP3.87□□□□□ -1.79
PTPN4-209ENST00000469511 DBTP11182 482 aaKnown RBP3.87□□□□□ -1.79
PTPN4-209ENST00000469511 RPL35AP18077 110 aaKnown RBP3.87□□□□□ -1.79
PTPN4-209ENST00000469511 BMI1P35226 326 aa3.87□□□□□ -1.79
PTPN4-209ENST00000469511 CRISP1P54107 249 aa3.87□□□□□ -1.79
PTPN4-209ENST00000469511 KRTAP10-2P60368 255 aa3.87□□□□□ -1.79
PTPN4-209ENST00000469511 ACTR3P61158 418 aa3.87□□□□□ -1.79
PTPN4-209ENST00000469511 TMEM267Q0VDI3 215 aaPredicted RBP3.87□□□□□ -1.79
PTPN4-209ENST00000469511 ALKBH1Q13686 389 aaKnown RBP3.87□□□□□ -1.79
PTPN4-209ENST00000469511 IL13RA2Q14627 380 aa3.87□□□□□ -1.79
PTPN4-209ENST00000469511 FXYD3Q14802 87 aa3.87□□□□□ -1.79
PTPN4-209ENST00000469511 PTGES3Q15185 160 aaKnown RBP3.87□□□□□ -1.79
PTPN4-209ENST00000469511 PLGLAQ15195 96 aa3.87□□□□□ -1.79
PTPN4-209ENST00000469511 PSG5Q15238 335 aa3.87□□□□□ -1.79
PTPN4-209ENST00000469511 MRGPRG-AS1Q2M3A8 158 aa3.87□□□□□ -1.79
PTPN4-209ENST00000469511 RPEL1Q2QD12 228 aa3.87□□□□□ -1.79
PTPN4-209ENST00000469511 PLAC9Q5JTB6 97 aa3.87□□□□□ -1.79
PTPN4-209ENST00000469511 ATAD3CQ5T2N8 411 aa3.87□□□□□ -1.79
PTPN4-209ENST00000469511 PYHIN1Q6K0P9 492 aa3.87□□□□□ -1.79
PTPN4-209ENST00000469511 ASCL4Q6XD76 172 aa3.87□□□□□ -1.79
PTPN4-209ENST00000469511 ZNF497Q6ZNH5 498 aa3.87□□□□□ -1.79
PTPN4-209ENST00000469511 C19orf35Q6ZS72 473 aa3.87□□□□□ -1.79
PTPN4-209ENST00000469511 ZNF833PQ6ZTB9 187 aa3.87□□□□□ -1.79
PTPN4-209ENST00000469511 LAX1Q8IWV1 398 aa3.87□□□□□ -1.79
PTPN4-209ENST00000469511 TCTEX1D1Q8N7M0 179 aa3.87□□□□□ -1.79
PTPN4-209ENST00000469511 DRAXINQ8NBI3 349 aaPredicted RBP3.87□□□□□ -1.79
PTPN4-209ENST00000469511 OR2K2Q8NGT1 345 aa3.87□□□□□ -1.79
PTPN4-209ENST00000469511 DYNLRB2Q8TF09 96 aa3.87□□□□□ -1.79
PTPN4-209ENST00000469511 TNFAIP8L1Q8WVP5 186 aa3.87□□□□□ -1.79
PTPN4-209ENST00000469511 ORAI1Q96D31 301 aa3.87□□□□□ -1.79
PTPN4-209ENST00000469511 RNF183Q96D59 192 aa3.87□□□□□ -1.79
PTPN4-209ENST00000469511 SCRT1Q9BWW7 348 aa3.87□□□□□ -1.79
PTPN4-209ENST00000469511 IFI27L2Q9H2X8 130 aa3.87□□□□□ -1.79
PTPN4-209ENST00000469511 OR2S2Q9NQN1 319 aa3.87□□□□□ -1.79
PTPN4-209ENST00000469511 METTL1Q9UBP6 276 aaKnown RBP3.87□□□□□ -1.79
PTPN4-209ENST00000469511 MLXQ9UH92 298 aa3.87□□□□□ -1.79
PTPN4-209ENST00000469511 GNG8Q9UK08 70 aa3.87□□□□□ -1.79
PTPN4-209ENST00000469511 ERGIC3Q9Y282 383 aa3.87□□□□□ -1.79
PTPN4-209ENST00000469511 DNAH5Q8TE73 4624 aa3.86□□□□□ -1.79
PTPN4-209ENST00000469511 H0YJW9 148 aa3.86□□□□□ -1.79
PTPN4-209ENST00000469511 H3BNX3 289 aa3.86□□□□□ -1.79
PTPN4-209ENST00000469511 ACTL6BO94805 426 aa3.86□□□□□ -1.79
PTPN4-209ENST00000469511 OR2A4O95047 310 aa3.86□□□□□ -1.79
PTPN4-209ENST00000469511 OR2C1O95371 312 aa3.86□□□□□ -1.79
PTPN4-209ENST00000469511 CST1P01037 141 aa3.86□□□□□ -1.79
PTPN4-209ENST00000469511 IGHV3-23P01764 117 aa3.86□□□□□ -1.79
PTPN4-209ENST00000469511 IGKV1-16P04430 117 aa3.86□□□□□ -1.79
PTPN4-209ENST00000469511 ISG15P05161 165 aa3.86□□□□□ -1.79
PTPN4-209ENST00000469511 OCM2P0CE71 109 aa3.86□□□□□ -1.79
PTPN4-209ENST00000469511 OCMP0CE72 109 aaPredicted RBP3.86□□□□□ -1.79
PTPN4-209ENST00000469511 UBCP0CG48 685 aaKnown RBP3.86□□□□□ -1.79
PTPN4-209ENST00000469511 KCNJ3P48549 501 aa3.86□□□□□ -1.79
PTPN4-209ENST00000469511 DAPP51397 102 aa3.86□□□□□ -1.79
PTPN4-209ENST00000469511 RBMS2Q15434 407 aaKnown RBP3.86□□□□□ -1.79
PTPN4-209ENST00000469511 Q3ZCU0 254 aa3.86□□□□□ -1.79
PTPN4-209ENST00000469511 TMEM244Q5VVB8 128 aa3.86□□□□□ -1.79
PTPN4-209ENST00000469511 IGFL4Q6B9Z1 124 aa3.86□□□□□ -1.79
PTPN4-209ENST00000469511 ZNF562Q6V9R5 426 aa3.86□□□□□ -1.79
PTPN4-209ENST00000469511 DEFB107AQ8IZN7 70 aa3.86□□□□□ -1.79
PTPN4-209ENST00000469511 PXT1Q8NFP0 134 aa3.86□□□□□ -1.79
PTPN4-209ENST00000469511 OR10H4Q8NGA5 316 aa3.86□□□□□ -1.79
PTPN4-209ENST00000469511 OR52B4Q8NGK2 314 aa3.86□□□□□ -1.79
PTPN4-209ENST00000469511 OR13C3Q8NGS6 347 aa3.86□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms