RNA–Protein interactions for RNA: ENST00000468545.1

TMEM39A-204, Transcript of transmembrane protein 39A, humanhuman

TSL 4

Gene TMEM39A, Length 575 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-204ENST00000468545 TRBV6-6A0A0A6YYG2 114 aa3.33□□□□□ -1.88
TMEM39A-204ENST00000468545 IGKV1-6A0A0C4DH72 117 aa3.33□□□□□ -1.88
TMEM39A-204ENST00000468545 KBTBD11-OT1A0A1B0GTJ5 212 aa3.33□□□□□ -1.88
TMEM39A-204ENST00000468545 A0A1W2PPH5 198 aa3.33□□□□□ -1.88
TMEM39A-204ENST00000468545 A0A1W2PRD5 423 aa3.33□□□□□ -1.88
TMEM39A-204ENST00000468545 A0A1W2PRF3 423 aa3.33□□□□□ -1.88
TMEM39A-204ENST00000468545 A0A1W2PRM7 423 aa3.33□□□□□ -1.88
TMEM39A-204ENST00000468545 NAP1L6A6NFF2 107 aa3.33□□□□□ -1.88
TMEM39A-204ENST00000468545 OR5H14A6NHG9 310 aa3.33□□□□□ -1.88
TMEM39A-204ENST00000468545 ZNF729A6NN14 1252 aaPredicted RBP3.33□□□□□ -1.88
TMEM39A-204ENST00000468545 VGLL3A8MV65 326 aa3.33□□□□□ -1.88
TMEM39A-204ENST00000468545 C15orf65H3BRN8 121 aa3.33□□□□□ -1.88
TMEM39A-204ENST00000468545 NDUFS8O00217 210 aa3.33□□□□□ -1.88
TMEM39A-204ENST00000468545 HSD17B6O14756 317 aa3.33□□□□□ -1.88
TMEM39A-204ENST00000468545 ARPC1BO15143 372 aaKnown RBP3.33□□□□□ -1.88
TMEM39A-204ENST00000468545 FOXH1O75593 365 aa3.33□□□□□ -1.88
TMEM39A-204ENST00000468545 MMP23AO75900 390 aa3.33□□□□□ -1.88
TMEM39A-204ENST00000468545 DIRAS3O95661 229 aa3.33□□□□□ -1.88
TMEM39A-204ENST00000468545 IGHV2-5P01817 119 aa3.33□□□□□ -1.88
TMEM39A-204ENST00000468545 CD74P04233 296 aa3.33□□□□□ -1.88
TMEM39A-204ENST00000468545 CTXN2P0C2S0 81 aa3.33□□□□□ -1.88
TMEM39A-204ENST00000468545 ZNF735P0CB33 412 aa3.33□□□□□ -1.88
TMEM39A-204ENST00000468545 ZNF728P0DKX0 622 aa3.33□□□□□ -1.88
TMEM39A-204ENST00000468545 PAX1P15863 534 aa3.33□□□□□ -1.88
TMEM39A-204ENST00000468545 SLC25A16P16260 332 aa3.33□□□□□ -1.88
TMEM39A-204ENST00000468545 USF1P22415 310 aaPredicted RBP3.33□□□□□ -1.88
TMEM39A-204ENST00000468545 AADACP22760 399 aa3.33□□□□□ -1.88
TMEM39A-204ENST00000468545 COX7A1P24310 79 aa3.33□□□□□ -1.88
TMEM39A-204ENST00000468545 PPP1CCP36873 323 aaKnown RBP3.33□□□□□ -1.88
TMEM39A-204ENST00000468545 GNG10P50151 68 aa3.33□□□□□ -1.88
TMEM39A-204ENST00000468545 TAS2R46P59540 309 aa3.33□□□□□ -1.88
TMEM39A-204ENST00000468545 HERV-K104P61576 105 aa3.33□□□□□ -1.88
TMEM39A-204ENST00000468545 LMO4P61968 165 aa3.33□□□□□ -1.88
TMEM39A-204ENST00000468545 MEF2CQ06413 473 aaPredicted RBP3.33□□□□□ -1.88
TMEM39A-204ENST00000468545 BAMBIQ13145 260 aa3.33□□□□□ -1.88
TMEM39A-204ENST00000468545 ASAH1Q13510 395 aa3.33□□□□□ -1.88
TMEM39A-204ENST00000468545 GNMTQ14749 295 aa3.33□□□□□ -1.88
TMEM39A-204ENST00000468545 MEF2DQ14814 521 aa3.33□□□□□ -1.88
TMEM39A-204ENST00000468545 RBMS2Q15434 407 aaKnown RBP3.33□□□□□ -1.88
TMEM39A-204ENST00000468545 HMGN3Q15651 99 aa3.33□□□□□ -1.88
TMEM39A-204ENST00000468545 C17orf58Q2M2W7 97 aa3.33□□□□□ -1.88
TMEM39A-204ENST00000468545 TRIM16LQ309B1 348 aa3.33□□□□□ -1.88
TMEM39A-204ENST00000468545 ACTBL2Q562R1 376 aa3.33□□□□□ -1.88
TMEM39A-204ENST00000468545 METTL11BQ5VVY1 283 aa3.33□□□□□ -1.88
TMEM39A-204ENST00000468545 TRAT1Q6PIZ9 186 aa3.33□□□□□ -1.88
TMEM39A-204ENST00000468545 CCBE1Q6UXH8 406 aaPredicted RBP3.33□□□□□ -1.88
TMEM39A-204ENST00000468545 IDO2Q6ZQW0 420 aa3.33□□□□□ -1.88
TMEM39A-204ENST00000468545 DNM1P46Q6ZS02 220 aa3.33□□□□□ -1.88
TMEM39A-204ENST00000468545 MOB1BQ7L9L4 216 aa3.33□□□□□ -1.88
TMEM39A-204ENST00000468545 NRARPQ7Z6K4 114 aa3.33□□□□□ -1.88
TMEM39A-204ENST00000468545 TMED4Q7Z7H5 227 aa3.33□□□□□ -1.88
TMEM39A-204ENST00000468545 TMEM17Q86X19 198 aa3.33□□□□□ -1.88
TMEM39A-204ENST00000468545 LRRC75A-AS1Q8N1F1 130 aa3.33□□□□□ -1.88
TMEM39A-204ENST00000468545 CENPSQ8N2Z9 138 aa3.33□□□□□ -1.88
TMEM39A-204ENST00000468545 TMEM217Q8N7C4 229 aa3.33□□□□□ -1.88
TMEM39A-204ENST00000468545 OR4A4PQ8NGN8 299 aa3.33□□□□□ -1.88
TMEM39A-204ENST00000468545 MARCH1Q8TCQ1 289 aa3.33□□□□□ -1.88
TMEM39A-204ENST00000468545 ZFAND2BQ8WV99 257 aa3.33□□□□□ -1.88
TMEM39A-204ENST00000468545 SECTM1Q8WVN6 248 aa3.33□□□□□ -1.88
TMEM39A-204ENST00000468545 TOMM40LQ969M1 308 aa3.33□□□□□ -1.88
TMEM39A-204ENST00000468545 GALMQ96C23 342 aa3.33□□□□□ -1.88
TMEM39A-204ENST00000468545 ZNF714Q96N38 554 aa3.33□□□□□ -1.88
TMEM39A-204ENST00000468545 C7orf50Q9BRJ6 194 aaKnown RBP3.33□□□□□ -1.88
TMEM39A-204ENST00000468545 PCGF1Q9BSM1 259 aa3.33□□□□□ -1.88
TMEM39A-204ENST00000468545 REG4Q9BYZ8 158 aa3.33□□□□□ -1.88
TMEM39A-204ENST00000468545 CTDSP1Q9GZU7 261 aa3.33□□□□□ -1.88
TMEM39A-204ENST00000468545 SLC5A7Q9GZV3 580 aa3.33□□□□□ -1.88
TMEM39A-204ENST00000468545 GAL3ST2Q9H3Q3 398 aa3.33□□□□□ -1.88
TMEM39A-204ENST00000468545 AAMDCQ9H7C9 122 aa3.33□□□□□ -1.88
TMEM39A-204ENST00000468545 MMP26Q9NRE1 261 aa3.33□□□□□ -1.88
TMEM39A-204ENST00000468545 CCL28Q9NRJ3 127 aa3.33□□□□□ -1.88
TMEM39A-204ENST00000468545 TMEM160Q9NX00 188 aa3.33□□□□□ -1.88
TMEM39A-204ENST00000468545 RDH8Q9NYR8 311 aa3.33□□□□□ -1.88
TMEM39A-204ENST00000468545 CALYQ9NYX4 217 aa3.33□□□□□ -1.88
TMEM39A-204ENST00000468545 MSRB1Q9NZV6 116 aa3.33□□□□□ -1.88
TMEM39A-204ENST00000468545 GNG12Q9UBI6 72 aa3.33□□□□□ -1.88
TMEM39A-204ENST00000468545 RPUSD1Q9UJJ7 312 aaKnown RBP3.33□□□□□ -1.88
TMEM39A-204ENST00000468545 SCP2D1Q9UJQ7 156 aa3.33□□□□□ -1.88
TMEM39A-204ENST00000468545 KCNS2Q9ULS6 477 aa3.33□□□□□ -1.88
TMEM39A-204ENST00000468545 ANAPC10Q9UM13 185 aa3.33□□□□□ -1.88
TMEM39A-204ENST00000468545 MGAT4AQ9UM21 535 aa3.33□□□□□ -1.88
TMEM39A-204ENST00000468545 FLVCR2Q9UPI3 526 aa3.33□□□□□ -1.88
TMEM39A-204ENST00000468545 LINC00312Q9Y6C7 94 aa3.33□□□□□ -1.88
TMEM39A-204ENST00000468545 AKAP6Q13023 2319 aa3.32□□□□□ -1.88
TMEM39A-204ENST00000468545 IGHV3OR16-10A0A075B7F0 116 aa3.32□□□□□ -1.88
TMEM39A-204ENST00000468545 NBPF19A0A087WUL8 3843 aa3.32□□□□□ -1.88
TMEM39A-204ENST00000468545 TRBV6-7A0A0A0MS04 114 aa3.32□□□□□ -1.88
TMEM39A-204ENST00000468545 hCG_1809904A0A1W2PP81 198 aa3.32□□□□□ -1.88
TMEM39A-204ENST00000468545 A0A1W2PPE2 198 aa3.32□□□□□ -1.88
TMEM39A-204ENST00000468545 A0A1W2PR64 198 aa3.32□□□□□ -1.88
TMEM39A-204ENST00000468545 A0A1W2PRV1 198 aa3.32□□□□□ -1.88
TMEM39A-204ENST00000468545 F5H0A9 414 aaPredicted RBP3.32□□□□□ -1.88
TMEM39A-204ENST00000468545 INMT-MINDY4F8WBC2 141 aa3.32□□□□□ -1.88
TMEM39A-204ENST00000468545 TOR1AO14656 332 aa3.32□□□□□ -1.88
TMEM39A-204ENST00000468545 SLC31A2O15432 143 aa3.32□□□□□ -1.88
TMEM39A-204ENST00000468545 TNFSF12O43508 249 aa3.32□□□□□ -1.88
TMEM39A-204ENST00000468545 FSTL3O95633 263 aa3.32□□□□□ -1.88
TMEM39A-204ENST00000468545 TGFAP01135 160 aa3.32□□□□□ -1.88
TMEM39A-204ENST00000468545 TCRBP04435 133 aa3.32□□□□□ -1.88
TMEM39A-204ENST00000468545 LIPFP07098 398 aa3.32□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms