RNA–Protein interactions for RNA: ENST00000468338.5

COL4A6-205, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 5

Gene COL4A6, Length 865 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-205ENST00000468338 PIPOXQ9P0Z9 390 aa8.81□□□□□ -1
COL4A6-205ENST00000468338 SLC23A1Q9UHI7 598 aa8.81□□□□□ -1
COL4A6-205ENST00000468338 A0A087WXM4 84 aa8.8□□□□□ -1
COL4A6-205ENST00000468338 SMIM30A4D0T7 59 aa8.8□□□□□ -1
COL4A6-205ENST00000468338 TRDCB7Z8K6 153 aa8.8□□□□□ -1
COL4A6-205ENST00000468338 RAB29O14966 203 aa8.8□□□□□ -1
COL4A6-205ENST00000468338 PROP1O75360 226 aa8.8□□□□□ -1
COL4A6-205ENST00000468338 OPN1MWP04001 364 aa8.8□□□□□ -1
COL4A6-205ENST00000468338 FCGR3AP08637 254 aa8.8□□□□□ -1
COL4A6-205ENST00000468338 OPN1MW2P0DN77 364 aa8.8□□□□□ -1
COL4A6-205ENST00000468338 OPN1MW3P0DN78 364 aa8.8□□□□□ -1
COL4A6-205ENST00000468338 GNB3P16520 340 aa8.8□□□□□ -1
COL4A6-205ENST00000468338 ZBTB25P24278 435 aa8.8□□□□□ -1
COL4A6-205ENST00000468338 OR3A3P47888 321 aa8.8□□□□□ -1
COL4A6-205ENST00000468338 F2RL1P55085 397 aa8.8□□□□□ -1
COL4A6-205ENST00000468338 SFXN4Q6P4A7 337 aa8.8□□□□□ -1
COL4A6-205ENST00000468338 C10orf99Q6UWK7 81 aa8.8□□□□□ -1
COL4A6-205ENST00000468338 CENPVQ7Z7K6 275 aaPredicted RBP8.8□□□□□ -1
COL4A6-205ENST00000468338 SETD6Q8TBK2 473 aa8.8□□□□□ -1
COL4A6-205ENST00000468338 S1PR3Q99500 378 aa8.8□□□□□ -1
COL4A6-205ENST00000468338 CHCHD6Q9BRQ6 235 aa8.8□□□□□ -1
COL4A6-205ENST00000468338 CENPOQ9BU64 300 aa8.8□□□□□ -1
COL4A6-205ENST00000468338 MRPL20Q9BYC9 149 aaKnown RBP8.8□□□□□ -1
COL4A6-205ENST00000468338 C11orf54Q9H0W9 315 aaPredicted RBP8.8□□□□□ -1
COL4A6-205ENST00000468338 RNF167Q9H6Y7 350 aa8.8□□□□□ -1
COL4A6-205ENST00000468338 OR1A1Q9P1Q5 309 aa8.8□□□□□ -1
COL4A6-205ENST00000468338 LINC01548A6NM66 108 aa8.79□□□□□ -1
COL4A6-205ENST00000468338 TMEM127O75204 238 aa8.79□□□□□ -1
COL4A6-205ENST00000468338 TNFAIP8O95379 198 aa8.79□□□□□ -1
COL4A6-205ENST00000468338 CD3GP09693 182 aa8.79□□□□□ -1
COL4A6-205ENST00000468338 CT45A6P0DMU7 189 aa8.79□□□□□ -1
COL4A6-205ENST00000468338 CT45A5P0DMU8 189 aa8.79□□□□□ -1
COL4A6-205ENST00000468338 CT45A7P0DMV0 189 aa8.79□□□□□ -1
COL4A6-205ENST00000468338 CEACAM6P40199 344 aa8.79□□□□□ -1
COL4A6-205ENST00000468338 SERPINB10P48595 397 aa8.79□□□□□ -1
COL4A6-205ENST00000468338 ARL6IP1Q15041 203 aa8.79□□□□□ -1
COL4A6-205ENST00000468338 C9orf152Q5JTZ5 239 aa8.79□□□□□ -1
COL4A6-205ENST00000468338 TSPAN14Q8NG11 270 aa8.79□□□□□ -1
COL4A6-205ENST00000468338 OR4A4PQ8NGN8 299 aa8.79□□□□□ -1
COL4A6-205ENST00000468338 FAM110DQ8TAY7 271 aaPredicted RBP8.79□□□□□ -1
COL4A6-205ENST00000468338 RBMXL1Q96E39 390 aaKnown RBP8.79□□□□□ -1
COL4A6-205ENST00000468338 YIPF6Q96EC8 236 aa8.79□□□□□ -1
COL4A6-205ENST00000468338 CABLES2Q9BTV7 478 aa8.79□□□□□ -1
COL4A6-205ENST00000468338 DAPK2Q9UIK4 370 aa8.79□□□□□ -1
COL4A6-205ENST00000468338 ZNF580Q9UK33 172 aa8.79□□□□□ -1
COL4A6-205ENST00000468338 GAB2Q9UQC2 676 aa8.79□□□□□ -1
COL4A6-205ENST00000468338 TRBV6-7A0A0A0MS04 114 aa8.78□□□□□ -1
COL4A6-205ENST00000468338 LOC100506127A0A0U1RQW1 187 aa8.78□□□□□ -1
COL4A6-205ENST00000468338 NCBP2LA6PVI3 153 aaKnown RBP8.78□□□□□ -1
COL4A6-205ENST00000468338 FABP7O15540 132 aa8.78□□□□□ -1
COL4A6-205ENST00000468338 GPR12P47775 334 aa8.78□□□□□ -1
COL4A6-205ENST00000468338 KIR2DS1Q14954 304 aa8.78□□□□□ -1
COL4A6-205ENST00000468338 TIMM50Q3ZCQ8 353 aa8.78□□□□□ -1
COL4A6-205ENST00000468338 SLC35E3Q7Z769 313 aa8.78□□□□□ -1
COL4A6-205ENST00000468338 NPBQ8NG41 125 aa8.78□□□□□ -1
COL4A6-205ENST00000468338 OR4X2Q8NGF9 303 aa8.78□□□□□ -1
COL4A6-205ENST00000468338 OR5AN1Q8NGI8 311 aa8.78□□□□□ -1
COL4A6-205ENST00000468338 LGALS14Q8TCE9 139 aa8.78□□□□□ -1
COL4A6-205ENST00000468338 CHPT1Q8WUD6 406 aa8.78□□□□□ -1
COL4A6-205ENST00000468338 ABHD14BQ96IU4 210 aa8.78□□□□□ -1
COL4A6-205ENST00000468338 RITA1Q96K30 269 aa8.78□□□□□ -1
COL4A6-205ENST00000468338 NOL4LQ96MY1 436 aaPredicted RBP8.78□□□□□ -1
COL4A6-205ENST00000468338 ATG5Q9H1Y0 275 aa8.78□□□□□ -1
COL4A6-205ENST00000468338 TSSC4Q9Y5U2 329 aaPredicted RBP8.78□□□□□ -1
COL4A6-205ENST00000468338 MEGF8Q7Z7M0 2845 aa8.78□□□□□ -1
COL4A6-205ENST00000468338 IGKV1D-8A0A087WSZ0 117 aa8.77□□□□□ -1.01
COL4A6-205ENST00000468338 PSMB11A5LHX3 300 aa8.77□□□□□ -1.01
COL4A6-205ENST00000468338 OR5H14A6NHG9 310 aa8.77□□□□□ -1.01
COL4A6-205ENST00000468338 H0YJW9 148 aa8.77□□□□□ -1.01
COL4A6-205ENST00000468338 AP4M1O00189 453 aa8.77□□□□□ -1.01
COL4A6-205ENST00000468338 HSPA12AO43301 675 aa8.77□□□□□ -1.01
COL4A6-205ENST00000468338 KCNAB3O43448 404 aa8.77□□□□□ -1.01
COL4A6-205ENST00000468338 SCGNO76038 276 aa8.77□□□□□ -1.01
COL4A6-205ENST00000468338 NDUFA3O95167 84 aa8.77□□□□□ -1.01
COL4A6-205ENST00000468338 GSTT2P0CG29 244 aa8.77□□□□□ -1.01
COL4A6-205ENST00000468338 GSTT2BP0CG30 244 aa8.77□□□□□ -1.01
COL4A6-205ENST00000468338 DTYMKP23919 212 aa8.77□□□□□ -1.01
COL4A6-205ENST00000468338 ACTBP60709 375 aa8.77□□□□□ -1.01
COL4A6-205ENST00000468338 MXD1Q05195 221 aa8.77□□□□□ -1.01
COL4A6-205ENST00000468338 NSUN5P1Q3KNT7 163 aa8.77□□□□□ -1.01
COL4A6-205ENST00000468338 ZNF260Q3ZCT1 412 aa8.77□□□□□ -1.01
COL4A6-205ENST00000468338 CDNFQ49AH0 187 aa8.77□□□□□ -1.01
COL4A6-205ENST00000468338 RPL39P5Q59GN2 51 aa8.77□□□□□ -1.01
COL4A6-205ENST00000468338 IGSF11Q5DX21 431 aa8.77□□□□□ -1.01
COL4A6-205ENST00000468338 HACD4Q5VWC8 232 aa8.77□□□□□ -1.01
COL4A6-205ENST00000468338 ZNF329Q86UD4 541 aa8.77□□□□□ -1.01
COL4A6-205ENST00000468338 STPG2Q8N412 459 aa8.77□□□□□ -1.01
COL4A6-205ENST00000468338 COMMD1Q8N668 190 aa8.77□□□□□ -1.01
COL4A6-205ENST00000468338 WFDC9Q8NEX5 89 aa8.77□□□□□ -1.01
COL4A6-205ENST00000468338 OR4F17Q8NGA8 305 aa8.77□□□□□ -1.01
COL4A6-205ENST00000468338 OR5H6Q8NGV6 325 aa8.77□□□□□ -1.01
COL4A6-205ENST00000468338 SLC25A38Q96DW6 304 aa8.77□□□□□ -1.01
COL4A6-205ENST00000468338 OR4F4Q96R69 305 aa8.77□□□□□ -1.01
COL4A6-205ENST00000468338 RHBDL2Q9NX52 303 aa8.77□□□□□ -1.01
COL4A6-205ENST00000468338 RDH8Q9NYR8 311 aa8.77□□□□□ -1.01
COL4A6-205ENST00000468338 ZNF230Q9UIE0 474 aaPredicted RBP8.77□□□□□ -1.01
COL4A6-205ENST00000468338 SCOCQ9UIL1 159 aa8.77□□□□□ -1.01
COL4A6-205ENST00000468338 ELF5Q9UKW6 265 aaPredicted RBP8.77□□□□□ -1.01
COL4A6-205ENST00000468338 ETV7Q9Y603 341 aa8.77□□□□□ -1.01
COL4A6-205ENST00000468338 A0A075B6Q4 140 aa8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms