RNA–Protein interactions for RNA: ENST00000468179.6

COMMD3-206, Transcript of COMM domain containing 3, humanhuman

TSL 2

Gene COMMD3, Length 1,344 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-206ENST00000468179 LIN54Q6MZP7 749 aa11.51□□□□□ -0.57
COMMD3-206ENST00000468179 OR5AN1Q8NGI8 311 aa11.51□□□□□ -0.57
COMMD3-206ENST00000468179 RCC1LQ96I51 464 aaKnown RBP11.51□□□□□ -0.57
COMMD3-206ENST00000468179 ABHD14BQ96IU4 210 aa11.51□□□□□ -0.57
COMMD3-206ENST00000468179 GPR61Q9BZJ8 451 aa11.51□□□□□ -0.57
COMMD3-206ENST00000468179 TOLLIPQ9H0E2 274 aa11.51□□□□□ -0.57
COMMD3-206ENST00000468179 OR51E2Q9H255 320 aa11.51□□□□□ -0.57
COMMD3-206ENST00000468179 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP11.51□□□□□ -0.57
COMMD3-206ENST00000468179 RDH8Q9NYR8 311 aa11.51□□□□□ -0.57
COMMD3-206ENST00000468179 WASHC3Q9Y3C0 194 aa11.51□□□□□ -0.57
COMMD3-206ENST00000468179 A0A0B4J203 849 aa11.5□□□□□ -0.57
COMMD3-206ENST00000468179 LOC100506127A0A0U1RQW1 187 aa11.5□□□□□ -0.57
COMMD3-206ENST00000468179 LINC01548A6NM66 108 aa11.5□□□□□ -0.57
COMMD3-206ENST00000468179 BET1O15155 118 aa11.5□□□□□ -0.57
COMMD3-206ENST00000468179 DTYMKP23919 212 aa11.5□□□□□ -0.57
COMMD3-206ENST00000468179 SDC2P34741 201 aa11.5□□□□□ -0.57
COMMD3-206ENST00000468179 PLGLAQ15195 96 aa11.5□□□□□ -0.57
COMMD3-206ENST00000468179 C5orf64Q2M2E5 130 aa11.5□□□□□ -0.57
COMMD3-206ENST00000468179 CDNFQ49AH0 187 aa11.5□□□□□ -0.57
COMMD3-206ENST00000468179 SFXN4Q6P4A7 337 aa11.5□□□□□ -0.57
COMMD3-206ENST00000468179 FAM131AQ6UXB0 335 aa11.5□□□□□ -0.57
COMMD3-206ENST00000468179 Q6ZS49 121 aa11.5□□□□□ -0.57
COMMD3-206ENST00000468179 NR2C2APQ86WQ0 139 aa11.5□□□□□ -0.57
COMMD3-206ENST00000468179 GINS4Q9BRT9 223 aa11.5□□□□□ -0.57
COMMD3-206ENST00000468179 CABLES2Q9BTV7 478 aa11.5□□□□□ -0.57
COMMD3-206ENST00000468179 RNF150Q9ULK6 438 aa11.5□□□□□ -0.57
COMMD3-206ENST00000468179 GAB2Q9UQC2 676 aa11.5□□□□□ -0.57
COMMD3-206ENST00000468179 A0A087WXM4 84 aa11.49□□□□□ -0.57
COMMD3-206ENST00000468179 TRBV6-7A0A0A0MS04 114 aa11.49□□□□□ -0.57
COMMD3-206ENST00000468179 IGKV1-6A0A0C4DH72 117 aa11.49□□□□□ -0.57
COMMD3-206ENST00000468179 SMIM30A4D0T7 59 aa11.49□□□□□ -0.57
COMMD3-206ENST00000468179 H0YJW9 148 aa11.49□□□□□ -0.57
COMMD3-206ENST00000468179 NDUFA3O95167 84 aa11.49□□□□□ -0.57
COMMD3-206ENST00000468179 TNFAIP8O95379 198 aa11.49□□□□□ -0.57
COMMD3-206ENST00000468179 APOA2P02652 100 aa11.49□□□□□ -0.57
COMMD3-206ENST00000468179 TFAP2AP05549 437 aa11.49□□□□□ -0.57
COMMD3-206ENST00000468179 CTXN2P0C2S0 81 aa11.49□□□□□ -0.57
COMMD3-206ENST00000468179 MYCNOSP40205 109 aa11.49□□□□□ -0.57
COMMD3-206ENST00000468179 TAGLNQ01995 201 aaKnown RBP11.49□□□□□ -0.57
COMMD3-206ENST00000468179 CBX3Q13185 183 aa11.49□□□□□ -0.57
COMMD3-206ENST00000468179 ZNF695Q8IW36 515 aa11.49□□□□□ -0.57
COMMD3-206ENST00000468179 TSNAXQ99598 290 aaKnown RBP11.49□□□□□ -0.57
COMMD3-206ENST00000468179 HSPB9Q9BQS6 159 aa11.49□□□□□ -0.57
COMMD3-206ENST00000468179 PARP12Q9H0J9 701 aaKnown RBP11.49□□□□□ -0.57
COMMD3-206ENST00000468179 DCSTAMPQ9H295 470 aa11.49□□□□□ -0.57
COMMD3-206ENST00000468179 OR51J1Q9H342 316 aa11.49□□□□□ -0.57
COMMD3-206ENST00000468179 RBM7Q9Y580 266 aaKnown RBP11.49□□□□□ -0.57
COMMD3-206ENST00000468179 ETV7Q9Y603 341 aa11.49□□□□□ -0.57
COMMD3-206ENST00000468179 RRHO14718 337 aa11.48□□□□□ -0.57
COMMD3-206ENST00000468179 IGHG4P01861 327 aa11.48□□□□□ -0.57
COMMD3-206ENST00000468179 GSTT2P0CG29 244 aa11.48□□□□□ -0.57
COMMD3-206ENST00000468179 GSTT2BP0CG30 244 aa11.48□□□□□ -0.57
COMMD3-206ENST00000468179 MXD1Q05195 221 aa11.48□□□□□ -0.57
COMMD3-206ENST00000468179 OXLD1Q5BKU9 147 aa11.48□□□□□ -0.57
COMMD3-206ENST00000468179 HACD4Q5VWC8 232 aa11.48□□□□□ -0.57
COMMD3-206ENST00000468179 ZNF660Q6AZW8 331 aaPredicted RBP11.48□□□□□ -0.57
COMMD3-206ENST00000468179 TMEM65Q6PI78 240 aa11.48□□□□□ -0.57
COMMD3-206ENST00000468179 PDPNQ86YL7 162 aa11.48□□□□□ -0.57
COMMD3-206ENST00000468179 CROCCP3Q8IVE0 287 aa11.48□□□□□ -0.57
COMMD3-206ENST00000468179 RNF152Q8N8N0 203 aa11.48□□□□□ -0.57
COMMD3-206ENST00000468179 KLHL30-AS1Q8NEE0 82 aa11.48□□□□□ -0.57
COMMD3-206ENST00000468179 MCRIP2Q9BUT9 160 aaKnown RBP11.48□□□□□ -0.57
COMMD3-206ENST00000468179 NECAP2Q9NVZ3 263 aa11.48□□□□□ -0.57
COMMD3-206ENST00000468179 M0R1X1 148 aa11.47□□□□□ -0.57
COMMD3-206ENST00000468179 SPDEFO95238 335 aa11.47□□□□□ -0.57
COMMD3-206ENST00000468179 OR8U9P0C7N5 309 aa11.47□□□□□ -0.57
COMMD3-206ENST00000468179 CNTFRP26992 372 aa11.47□□□□□ -0.57
COMMD3-206ENST00000468179 CDX1P47902 265 aaPredicted RBP11.47□□□□□ -0.57
COMMD3-206ENST00000468179 THBS3P49746 956 aa11.47□□□□□ -0.57
COMMD3-206ENST00000468179 GNG2P59768 71 aa11.47□□□□□ -0.57
COMMD3-206ENST00000468179 RPS16P62249 146 aaKnown RBP11.47□□□□□ -0.57
COMMD3-206ENST00000468179 TMEM267Q0VDI3 215 aaPredicted RBP11.47□□□□□ -0.57
COMMD3-206ENST00000468179 IGSF11Q5DX21 431 aa11.47□□□□□ -0.57
COMMD3-206ENST00000468179 IDNKQ5T6J7 187 aa11.47□□□□□ -0.57
COMMD3-206ENST00000468179 GLDNQ6ZMI3 551 aaPredicted RBP11.47□□□□□ -0.57
COMMD3-206ENST00000468179 TSPAN14Q8NG11 270 aa11.47□□□□□ -0.57
COMMD3-206ENST00000468179 OR8U1Q8NH10 309 aa11.47□□□□□ -0.57
COMMD3-206ENST00000468179 FLYWCH2Q96CP2 140 aaKnown RBP11.47□□□□□ -0.57
COMMD3-206ENST00000468179 RITA1Q96K30 269 aa11.47□□□□□ -0.57
COMMD3-206ENST00000468179 PARP11Q9NR21 331 aa11.47□□□□□ -0.57
COMMD3-206ENST00000468179 RHBDL2Q9NX52 303 aa11.47□□□□□ -0.57
COMMD3-206ENST00000468179 ZNF230Q9UIE0 474 aaPredicted RBP11.47□□□□□ -0.57
COMMD3-206ENST00000468179 A0A0A6YYH2 397 aa11.46□□□□□ -0.57
COMMD3-206ENST00000468179 IGHV7-81A0A0B4J1V7 117 aa11.46□□□□□ -0.57
COMMD3-206ENST00000468179 TRAV41A0A0B4J266 112 aa11.46□□□□□ -0.57
COMMD3-206ENST00000468179 A6NJ64 397 aa11.46□□□□□ -0.57
COMMD3-206ENST00000468179 RPLP1P05386 114 aaKnown RBP11.46□□□□□ -0.57
COMMD3-206ENST00000468179 RRASP10301 218 aa11.46□□□□□ -0.57
COMMD3-206ENST00000468179 IGLL1P15814 213 aa11.46□□□□□ -0.57
COMMD3-206ENST00000468179 LGALS7P47929 136 aa11.46□□□□□ -0.57
COMMD3-206ENST00000468179 CFHR3Q02985 330 aa11.46□□□□□ -0.57
COMMD3-206ENST00000468179 C8orf86Q6ZUL3 223 aa11.46□□□□□ -0.57
COMMD3-206ENST00000468179 TCTEX1D1Q8N7M0 179 aa11.46□□□□□ -0.57
COMMD3-206ENST00000468179 LINC00482Q8N8I6 264 aa11.46□□□□□ -0.57
COMMD3-206ENST00000468179 LGALS14Q8TCE9 139 aa11.46□□□□□ -0.57
COMMD3-206ENST00000468179 DPF1Q92782 380 aa11.46□□□□□ -0.57
COMMD3-206ENST00000468179 ADTRPQ96IZ2 230 aa11.46□□□□□ -0.57
COMMD3-206ENST00000468179 ST6GALNAC5Q9BVH7 336 aa11.46□□□□□ -0.57
COMMD3-206ENST00000468179 OR2D2Q9H210 308 aa11.46□□□□□ -0.57
COMMD3-206ENST00000468179 DIABLOQ9NR28 239 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms