RNA–Protein interactions for RNA: ENST00000467124.1

VPS13A-209, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 5

Gene VPS13A, Length 324 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-209ENST00000467124 TEX50A0A1B0GTY4 177 aa2.04□□□□□ -2.08
VPS13A-209ENST00000467124 C5orf49A4QMS7 147 aa2.04□□□□□ -2.08
VPS13A-209ENST00000467124 C17orf98A8MV24 154 aa2.04□□□□□ -2.08
VPS13A-209ENST00000467124 DENRO43583 198 aaKnown RBP2.04□□□□□ -2.08
VPS13A-209ENST00000467124 GSTZ1O43708 216 aaPredicted RBP2.04□□□□□ -2.08
VPS13A-209ENST00000467124 LYPLA2O95372 231 aa2.04□□□□□ -2.08
VPS13A-209ENST00000467124 IGLV3-27P01718 113 aa2.04□□□□□ -2.08
VPS13A-209ENST00000467124 HLA-DQB2P05538 268 aa2.04□□□□□ -2.08
VPS13A-209ENST00000467124 NQO1P15559 274 aaKnown RBP2.04□□□□□ -2.08
VPS13A-209ENST00000467124 SLC25A16P16260 332 aa2.04□□□□□ -2.08
VPS13A-209ENST00000467124 CRYBB3P26998 211 aa2.04□□□□□ -2.08
VPS13A-209ENST00000467124 PSG4Q00888 419 aa2.04□□□□□ -2.08
VPS13A-209ENST00000467124 FABP5Q01469 135 aa2.04□□□□□ -2.08
VPS13A-209ENST00000467124 MGAT3Q09327 533 aa2.04□□□□□ -2.08
VPS13A-209ENST00000467124 FOXF1Q12946 379 aa2.04□□□□□ -2.08
VPS13A-209ENST00000467124 TAF9Q16594 264 aa2.04□□□□□ -2.08
VPS13A-209ENST00000467124 OGFRL1Q5TC84 451 aaPredicted RBP2.04□□□□□ -2.08
VPS13A-209ENST00000467124 OR10K2Q6IF99 312 aa2.04□□□□□ -2.08
VPS13A-209ENST00000467124 TNFAIP8L2Q6P589 184 aaPredicted RBP2.04□□□□□ -2.08
VPS13A-209ENST00000467124 LRRN1Q6UXK5 716 aa2.04□□□□□ -2.08
VPS13A-209ENST00000467124 PP632Q6XCG6 107 aa2.04□□□□□ -2.08
VPS13A-209ENST00000467124 SPATA31E1Q6ZUB1 1445 aa2.04□□□□□ -2.08
VPS13A-209ENST00000467124 DNAAF3Q8N9W5 541 aa2.04□□□□□ -2.08
VPS13A-209ENST00000467124 OR11H1Q8NG94 326 aa2.04□□□□□ -2.08
VPS13A-209ENST00000467124 OR4K13Q8NH42 304 aa2.04□□□□□ -2.08
VPS13A-209ENST00000467124 SPZ1Q9BXG8 430 aa2.04□□□□□ -2.08
VPS13A-209ENST00000467124 BABAM2Q9NXR7 383 aa2.04□□□□□ -2.08
VPS13A-209ENST00000467124 EMC3Q9P0I2 261 aa2.04□□□□□ -2.08
VPS13A-209ENST00000467124 MINOS1-NBL1R4GNA1 71 aa2.04□□□□□ -2.08
VPS13A-209ENST00000467124 HSPE1-MOB4S4R3N1 261 aa2.04□□□□□ -2.08
VPS13A-209ENST00000467124 CACNA1SQ13698 1873 aa2.03□□□□□ -2.08
VPS13A-209ENST00000467124 HMCN1Q96RW7 5635 aa2.03□□□□□ -2.08
VPS13A-209ENST00000467124 MYO3BQ8WXR4 1341 aa2.03□□□□□ -2.08
VPS13A-209ENST00000467124 TGIF2-C20orf24A0A0A6YYL0 155 aa2.03□□□□□ -2.08
VPS13A-209ENST00000467124 MDFIC2A0A1B0GVS7 189 aa2.03□□□□□ -2.08
VPS13A-209ENST00000467124 C3orf84H3BNL1 204 aa2.03□□□□□ -2.08
VPS13A-209ENST00000467124 PSCAO43653 123 aa2.03□□□□□ -2.08
VPS13A-209ENST00000467124 CRTAPO75718 401 aaPredicted RBP2.03□□□□□ -2.08
VPS13A-209ENST00000467124 LY6HO94772 140 aa2.03□□□□□ -2.08
VPS13A-209ENST00000467124 CDS2O95674 445 aa2.03□□□□□ -2.08
VPS13A-209ENST00000467124 IFNA5P01569 189 aa2.03□□□□□ -2.08
VPS13A-209ENST00000467124 TNNC2P02585 160 aa2.03□□□□□ -2.08
VPS13A-209ENST00000467124 CALB1P05937 261 aa2.03□□□□□ -2.08
VPS13A-209ENST00000467124 IL3P08700 152 aa2.03□□□□□ -2.08
VPS13A-209ENST00000467124 C8orf88P0DMB2 117 aa2.03□□□□□ -2.08
VPS13A-209ENST00000467124 CPMP14384 443 aa2.03□□□□□ -2.08
VPS13A-209ENST00000467124 AKR1C2P52895 323 aa2.03□□□□□ -2.08
VPS13A-209ENST00000467124 TSPEAR-AS2P59090 65 aa2.03□□□□□ -2.08
VPS13A-209ENST00000467124 FGF12P61328 243 aa2.03□□□□□ -2.08
VPS13A-209ENST00000467124 UBE2IP63279 158 aaKnown RBP2.03□□□□□ -2.08
VPS13A-209ENST00000467124 N4BP2L1Q5TBK1 243 aaPredicted RBP2.03□□□□□ -2.08
VPS13A-209ENST00000467124 HIST2H3AQ71DI3 136 aa2.03□□□□□ -2.08
VPS13A-209ENST00000467124 GID4Q8IVV7 300 aa2.03□□□□□ -2.08
VPS13A-209ENST00000467124 C10orf67Q8IYJ2 551 aa2.03□□□□□ -2.08
VPS13A-209ENST00000467124 LRRC34Q8IZ02 419 aa2.03□□□□□ -2.08
VPS13A-209ENST00000467124 DAND5Q8N907 189 aa2.03□□□□□ -2.08
VPS13A-209ENST00000467124 RNF133Q8WVZ7 376 aa2.03□□□□□ -2.08
VPS13A-209ENST00000467124 PTH2Q96A98 100 aa2.03□□□□□ -2.08
VPS13A-209ENST00000467124 ANKRD36BP1Q96IX9 119 aa2.03□□□□□ -2.08
VPS13A-209ENST00000467124 CAPZA3Q96KX2 299 aa2.03□□□□□ -2.08
VPS13A-209ENST00000467124 C1QTNF6Q9BXI9 259 aa2.03□□□□□ -2.08
VPS13A-209ENST00000467124 LRRC19Q9H756 370 aa2.03□□□□□ -2.08
VPS13A-209ENST00000467124 CXorf21Q9HAI6 301 aa2.03□□□□□ -2.08
VPS13A-209ENST00000467124 SNX12Q9UMY4 172 aa2.03□□□□□ -2.08
VPS13A-209ENST00000467124 ABCC11Q96J66 1382 aa2.02□□□□□ -2.09
VPS13A-209ENST00000467124 LCTP09848 1927 aa2.02□□□□□ -2.09
VPS13A-209ENST00000467124 UBE2L6O14933 153 aa2.02□□□□□ -2.09
VPS13A-209ENST00000467124 ZNF7P17097 686 aaPredicted RBP2.02□□□□□ -2.09
VPS13A-209ENST00000467124 OPRM1P35372 400 aa2.02□□□□□ -2.09
VPS13A-209ENST00000467124 CD200P41217 278 aa2.02□□□□□ -2.09
VPS13A-209ENST00000467124 LPAR6P43657 344 aa2.02□□□□□ -2.09
VPS13A-209ENST00000467124 MAP2K4P45985 399 aa2.02□□□□□ -2.09
VPS13A-209ENST00000467124 AP2S1P53680 142 aaPredicted RBP2.02□□□□□ -2.09
VPS13A-209ENST00000467124 PRDX4Q13162 271 aa2.02□□□□□ -2.09
VPS13A-209ENST00000467124 CD200R1LQ6Q8B3 271 aa2.02□□□□□ -2.09
VPS13A-209ENST00000467124 CCDC121Q6ZUS5 278 aa2.02□□□□□ -2.09
VPS13A-209ENST00000467124 UBL4BQ8N7F7 174 aa2.02□□□□□ -2.09
VPS13A-209ENST00000467124 OR8J2Q8NGG1 315 aa2.02□□□□□ -2.09
VPS13A-209ENST00000467124 RPS4Y2Q8TD47 263 aa2.02□□□□□ -2.09
VPS13A-209ENST00000467124 C12orf43Q96C57 262 aaKnown RBP2.02□□□□□ -2.09
VPS13A-209ENST00000467124 PPP1R14BQ96C90 147 aa2.02□□□□□ -2.09
VPS13A-209ENST00000467124 MRPS26Q9BYN8 205 aaKnown RBP2.02□□□□□ -2.09
VPS13A-209ENST00000467124 AICDAQ9GZX7 198 aa2.02□□□□□ -2.09
VPS13A-209ENST00000467124 OR51I1Q9H343 314 aa2.02□□□□□ -2.09
VPS13A-209ENST00000467124 XPNPEP1Q9NQW7 623 aa2.02□□□□□ -2.09
VPS13A-209ENST00000467124 GUCA1BQ9UMX6 200 aa2.02□□□□□ -2.09
VPS13A-209ENST00000467124 POLR1DQ9Y2S0 133 aa2.02□□□□□ -2.09
VPS13A-209ENST00000467124 HEY1Q9Y5J3 304 aa2.02□□□□□ -2.09
VPS13A-209ENST00000467124 COL18A1P39060 1754 aa2.02□□□□□ -2.09
VPS13A-209ENST00000467124 SHANK3Q9BYB0 1731 aa2.02□□□□□ -2.09
VPS13A-209ENST00000467124 ZNF638Q14966 1978 aaKnown RBP2.01□□□□□ -2.09
VPS13A-209ENST00000467124 TRPM3Q9HCF6 1732 aaPredicted RBP2.01□□□□□ -2.09
VPS13A-209ENST00000467124 E2F6O75461 281 aa2.01□□□□□ -2.09
VPS13A-209ENST00000467124 RPS17P08708 135 aaKnown RBP2.01□□□□□ -2.09
VPS13A-209ENST00000467124 CD7P09564 240 aa2.01□□□□□ -2.09
VPS13A-209ENST00000467124 CCR7P32248 378 aa2.01□□□□□ -2.09
VPS13A-209ENST00000467124 NKX2-5P52952 324 aaPredicted RBP2.01□□□□□ -2.09
VPS13A-209ENST00000467124 RPS24P62847 133 aaKnown RBP2.01□□□□□ -2.09
VPS13A-209ENST00000467124 CLVS2Q5SYC1 327 aa2.01□□□□□ -2.09
VPS13A-209ENST00000467124 C1orf194Q5T5A4 169 aa2.01□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms