RNA–Protein interactions for RNA: ENST00000466579.1

SDCCAG3-208, Transcript of Serologically defined colon cancer antigen 3, humanhuman

TSL 1 (best)

Gene SDCCAG3, Length 496 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCCAG3-208ENST00000466579 LIN7CQ9NUP9 197 aaKnown RBP7.51□□□□□ -1.21
SDCCAG3-208ENST00000466579 ZNF580Q9UK33 172 aa7.51□□□□□ -1.21
SDCCAG3-208ENST00000466579 PKD1L1Q8TDX9 2849 aa7.51□□□□□ -1.21
SDCCAG3-208ENST00000466579 RBBP9O75884 186 aa7.5□□□□□ -1.21
SDCCAG3-208ENST00000466579 NDUFA3O95167 84 aa7.5□□□□□ -1.21
SDCCAG3-208ENST00000466579 ELK1P19419 428 aa7.5□□□□□ -1.21
SDCCAG3-208ENST00000466579 GPR12P47775 334 aa7.5□□□□□ -1.21
SDCCAG3-208ENST00000466579 F2RL1P55085 397 aa7.5□□□□□ -1.21
SDCCAG3-208ENST00000466579 ACTBP60709 375 aa7.5□□□□□ -1.21
SDCCAG3-208ENST00000466579 SPCS2Q15005 226 aa7.5□□□□□ -1.21
SDCCAG3-208ENST00000466579 TMEM95Q3KNT9 176 aa7.5□□□□□ -1.21
SDCCAG3-208ENST00000466579 TMEM69Q5SWH9 247 aa7.5□□□□□ -1.21
SDCCAG3-208ENST00000466579 MZT2AQ6P582 158 aa7.5□□□□□ -1.21
SDCCAG3-208ENST00000466579 CLVS1Q8IUQ0 354 aaPredicted RBP7.5□□□□□ -1.21
SDCCAG3-208ENST00000466579 GVQW1Q8N7I0 195 aa7.5□□□□□ -1.21
SDCCAG3-208ENST00000466579 BEST4Q8NFU0 473 aa7.5□□□□□ -1.21
SDCCAG3-208ENST00000466579 DYNC2LI1Q8TCX1 351 aa7.5□□□□□ -1.21
SDCCAG3-208ENST00000466579 SNAPC3Q92966 411 aa7.5□□□□□ -1.21
SDCCAG3-208ENST00000466579 GINS4Q9BRT9 223 aa7.5□□□□□ -1.21
SDCCAG3-208ENST00000466579 SDHAF2Q9NX18 166 aa7.5□□□□□ -1.21
SDCCAG3-208ENST00000466579 CCDC59Q9P031 241 aaKnown RBP7.5□□□□□ -1.21
SDCCAG3-208ENST00000466579 COMMD3Q9UBI1 195 aa7.5□□□□□ -1.21
SDCCAG3-208ENST00000466579 ZNF221Q9UK13 617 aa7.5□□□□□ -1.21
SDCCAG3-208ENST00000466579 ADAM30Q9UKF2 790 aa7.5□□□□□ -1.21
SDCCAG3-208ENST00000466579 RNF150Q9ULK6 438 aa7.5□□□□□ -1.21
SDCCAG3-208ENST00000466579 OR2W1Q9Y3N9 320 aa7.5□□□□□ -1.21
SDCCAG3-208ENST00000466579 TET2Q6N021 2002 aaPredicted RBP7.5□□□□□ -1.21
SDCCAG3-208ENST00000466579 VWFP04275 2813 aa7.5□□□□□ -1.21
SDCCAG3-208ENST00000466579 FBN3Q75N90 2809 aa7.49□□□□□ -1.21
SDCCAG3-208ENST00000466579 SH2D7A6NKC9 451 aaPredicted RBP7.49□□□□□ -1.21
SDCCAG3-208ENST00000466579 LCE2BO14633 110 aa7.49□□□□□ -1.21
SDCCAG3-208ENST00000466579 HPGDSO60760 199 aa7.49□□□□□ -1.21
SDCCAG3-208ENST00000466579 SLC22A5O76082 557 aa7.49□□□□□ -1.21
SDCCAG3-208ENST00000466579 OR8U9P0C7N5 309 aa7.49□□□□□ -1.21
SDCCAG3-208ENST00000466579 VSIG10L2P0DP72 767 aa7.49□□□□□ -1.21
SDCCAG3-208ENST00000466579 PTHLHP12272 177 aa7.49□□□□□ -1.21
SDCCAG3-208ENST00000466579 TAGLNQ01995 201 aaKnown RBP7.49□□□□□ -1.21
SDCCAG3-208ENST00000466579 EIF4EBP1Q13541 118 aaPredicted RBP7.49□□□□□ -1.21
SDCCAG3-208ENST00000466579 MSMO1Q15800 293 aa7.49□□□□□ -1.21
SDCCAG3-208ENST00000466579 FAM131AQ6UXB0 335 aa7.49□□□□□ -1.21
SDCCAG3-208ENST00000466579 PDPNQ86YL7 162 aa7.49□□□□□ -1.21
SDCCAG3-208ENST00000466579 ZNF383Q8NA42 475 aa7.49□□□□□ -1.21
SDCCAG3-208ENST00000466579 OR8U1Q8NH10 309 aa7.49□□□□□ -1.21
SDCCAG3-208ENST00000466579 GPX8Q8TED1 209 aa7.49□□□□□ -1.21
SDCCAG3-208ENST00000466579 DDB2Q92466 427 aa7.49□□□□□ -1.21
SDCCAG3-208ENST00000466579 RITA1Q96K30 269 aa7.49□□□□□ -1.21
SDCCAG3-208ENST00000466579 OR2D2Q9H210 308 aa7.49□□□□□ -1.21
SDCCAG3-208ENST00000466579 SCPEP1Q9HB40 452 aa7.49□□□□□ -1.21
SDCCAG3-208ENST00000466579 SCOCQ9UIL1 159 aa7.49□□□□□ -1.21
SDCCAG3-208ENST00000466579 WASHC3Q9Y3C0 194 aa7.49□□□□□ -1.21
SDCCAG3-208ENST00000466579 CEPT1Q9Y6K0 416 aa7.49□□□□□ -1.21
SDCCAG3-208ENST00000466579 WNK1Q9H4A3 2382 aa7.48□□□□□ -1.21
SDCCAG3-208ENST00000466579 IGKV1D-13A0A0B4J2D9 117 aa7.48□□□□□ -1.21
SDCCAG3-208ENST00000466579 NCBP2LA6PVI3 153 aaKnown RBP7.48□□□□□ -1.21
SDCCAG3-208ENST00000466579 ADARB2-AS1A8MUL3 147 aa7.48□□□□□ -1.21
SDCCAG3-208ENST00000466579 H3BMQ9 156 aa7.48□□□□□ -1.21
SDCCAG3-208ENST00000466579 M0QZ24 198 aa7.48□□□□□ -1.21
SDCCAG3-208ENST00000466579 M0R1X1 148 aa7.48□□□□□ -1.21
SDCCAG3-208ENST00000466579 SULT1C2O00338 296 aa7.48□□□□□ -1.21
SDCCAG3-208ENST00000466579 NBR2O15453 112 aa7.48□□□□□ -1.21
SDCCAG3-208ENST00000466579 KCNAB3O43448 404 aa7.48□□□□□ -1.21
SDCCAG3-208ENST00000466579 FBXO24O75426 580 aa7.48□□□□□ -1.21
SDCCAG3-208ENST00000466579 IGLV2-14P01704 120 aa7.48□□□□□ -1.21
SDCCAG3-208ENST00000466579 HLA-DRB1P01911 266 aa7.48□□□□□ -1.21
SDCCAG3-208ENST00000466579 IGKV1-13P0DP09 117 aa7.48□□□□□ -1.21
SDCCAG3-208ENST00000466579 NFYAP23511 347 aaPredicted RBP7.48□□□□□ -1.21
SDCCAG3-208ENST00000466579 PRSS3P35030 304 aa7.48□□□□□ -1.21
SDCCAG3-208ENST00000466579 LUMP51884 338 aaPredicted RBP7.48□□□□□ -1.21
SDCCAG3-208ENST00000466579 CD83Q01151 205 aa7.48□□□□□ -1.21
SDCCAG3-208ENST00000466579 C5orf64Q2M2E5 130 aa7.48□□□□□ -1.21
SDCCAG3-208ENST00000466579 TCTEX1D4Q5JR98 221 aa7.48□□□□□ -1.21
SDCCAG3-208ENST00000466579 ZNF660Q6AZW8 331 aaPredicted RBP7.48□□□□□ -1.21
SDCCAG3-208ENST00000466579 GLDNQ6ZMI3 551 aaPredicted RBP7.48□□□□□ -1.21
SDCCAG3-208ENST00000466579 ZNF645Q8N7E2 425 aa7.48□□□□□ -1.21
SDCCAG3-208ENST00000466579 OR5AP2Q8NGF4 316 aa7.48□□□□□ -1.21
SDCCAG3-208ENST00000466579 ISOC1Q96CN7 298 aa7.48□□□□□ -1.21
SDCCAG3-208ENST00000466579 RBMXL1Q96E39 390 aaKnown RBP7.48□□□□□ -1.21
SDCCAG3-208ENST00000466579 ADTRPQ96IZ2 230 aa7.48□□□□□ -1.21
SDCCAG3-208ENST00000466579 RASL11BQ9BPW5 248 aa7.48□□□□□ -1.21
SDCCAG3-208ENST00000466579 NXF2Q9GZY0 626 aaKnown RBP7.48□□□□□ -1.21
SDCCAG3-208ENST00000466579 RBM38Q9H0Z9 239 aaKnown RBP7.48□□□□□ -1.21
SDCCAG3-208ENST00000466579 MIXL1Q9H2W2 232 aa7.48□□□□□ -1.21
SDCCAG3-208ENST00000466579 NECAP2Q9NVZ3 263 aa7.48□□□□□ -1.21
SDCCAG3-208ENST00000466579 SMIM31A0A1B0GVY4 71 aa7.47□□□□□ -1.21
SDCCAG3-208ENST00000466579 LINC01548A6NM66 108 aa7.47□□□□□ -1.21
SDCCAG3-208ENST00000466579 ZNF701M0R085 212 aaPredicted RBP7.47□□□□□ -1.21
SDCCAG3-208ENST00000466579 AP4M1O00189 453 aa7.47□□□□□ -1.21
SDCCAG3-208ENST00000466579 SPDEFO95238 335 aa7.47□□□□□ -1.21
SDCCAG3-208ENST00000466579 IGKV1-16P04430 117 aa7.47□□□□□ -1.21
SDCCAG3-208ENST00000466579 IGF1P05019 195 aa7.47□□□□□ -1.21
SDCCAG3-208ENST00000466579 OR5H8P0DN80 308 aa7.47□□□□□ -1.21
SDCCAG3-208ENST00000466579 CD28P10747 220 aa7.47□□□□□ -1.21
SDCCAG3-208ENST00000466579 CNTFRP26992 372 aa7.47□□□□□ -1.21
SDCCAG3-208ENST00000466579 DUTP33316 252 aaKnown RBP7.47□□□□□ -1.21
SDCCAG3-208ENST00000466579 SOX6P35712 828 aa7.47□□□□□ -1.21
SDCCAG3-208ENST00000466579 THBS3P49746 956 aa7.47□□□□□ -1.21
SDCCAG3-208ENST00000466579 LINC00205P59089 165 aa7.47□□□□□ -1.21
SDCCAG3-208ENST00000466579 ARPC4P59998 168 aa7.47□□□□□ -1.21
SDCCAG3-208ENST00000466579 CFHR3Q02985 330 aa7.47□□□□□ -1.21
SDCCAG3-208ENST00000466579 CDK10Q15131 360 aa7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms